RNA–Protein interactions for RNA: ENST00000565481.5

KIFC3-222, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-222	ENST00000565481	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.76	□□□□□ -0.21
KIFC3-222	ENST00000565481	TOP1	P11387	765 aa	Known RBP	13.75	□□□□□ -0.21
KIFC3-222	ENST00000565481	AKR1A1	P14550	325 aa		13.75	□□□□□ -0.21
KIFC3-222	ENST00000565481	NT5C2	P49902	561 aa		13.75	□□□□□ -0.21
KIFC3-222	ENST00000565481	RTP1	P59025	263 aa		13.75	□□□□□ -0.21
KIFC3-222	ENST00000565481	HAND2	P61296	217 aa		13.75	□□□□□ -0.21
KIFC3-222	ENST00000565481	BTNL9	Q6UXG8	535 aa		13.75	□□□□□ -0.21
KIFC3-222	ENST00000565481	SLC39A5	Q6ZMH5	540 aa		13.75	□□□□□ -0.21
KIFC3-222	ENST00000565481	ANKRD35	Q8N283	1001 aa		13.75	□□□□□ -0.21
KIFC3-222	ENST00000565481	FAM133A	Q8N9E0	248 aa		13.75	□□□□□ -0.21
KIFC3-222	ENST00000565481	AGBL1	Q96MI9	1066 aa		13.75	□□□□□ -0.21
KIFC3-222	ENST00000565481	TMEM47	Q9BQJ4	181 aa		13.75	□□□□□ -0.21
KIFC3-222	ENST00000565481	ACAD9	Q9H845	621 aa		13.75	□□□□□ -0.21
KIFC3-222	ENST00000565481	XPNPEP3	Q9NQH7	507 aa		13.75	□□□□□ -0.21
KIFC3-222	ENST00000565481	PRR12	Q9ULL5	1215 aa		13.75	□□□□□ -0.21
KIFC3-222	ENST00000565481	PHF24	Q9UPV7	400 aa		13.75	□□□□□ -0.21
KIFC3-222	ENST00000565481	HIP1	O00291	1037 aa		13.74	□□□□□ -0.21
KIFC3-222	ENST00000565481	SOX1	O00570	391 aa	Predicted RBP	13.74	□□□□□ -0.21
KIFC3-222	ENST00000565481	ADAMTS4	O75173	837 aa		13.74	□□□□□ -0.21
KIFC3-222	ENST00000565481	ATN1	P54259	1190 aa	Predicted RBP	13.74	□□□□□ -0.21
KIFC3-222	ENST00000565481	MFSD6	Q6ZSS7	791 aa		13.74	□□□□□ -0.21
KIFC3-222	ENST00000565481	TTC14	Q96N46	770 aa		13.74	□□□□□ -0.21
KIFC3-222	ENST00000565481	KATNBL1	Q9H079	304 aa		13.74	□□□□□ -0.21
KIFC3-222	ENST00000565481	RNF41	Q9H4P4	317 aa	Predicted RBP	13.74	□□□□□ -0.21
KIFC3-222	ENST00000565481	A1CF	Q9NQ94	594 aa	Known RBP	13.74	□□□□□ -0.21
KIFC3-222	ENST00000565481	TOMM22	Q9NS69	142 aa		13.74	□□□□□ -0.21
KIFC3-222	ENST00000565481	DIAPH3	Q9NSV4	1193 aa		13.74	□□□□□ -0.21
KIFC3-222	ENST00000565481	RNF146	Q9NTX7	359 aa		13.74	□□□□□ -0.21
KIFC3-222	ENST00000565481	NEDD4	P46934	1319 aa		13.73	□□□□□ -0.21
KIFC3-222	ENST00000565481	SYNRG	Q9UMZ2	1314 aa		13.73	□□□□□ -0.21
KIFC3-222	ENST00000565481	PGK1	P00558	417 aa		13.73	□□□□□ -0.21
KIFC3-222	ENST00000565481	SNHG28	P0DPA3	235 aa		13.73	□□□□□ -0.21
KIFC3-222	ENST00000565481	PDE4A	P27815	886 aa		13.73	□□□□□ -0.21
KIFC3-222	ENST00000565481	ADCYAP1R1	P41586	468 aa		13.73	□□□□□ -0.21
KIFC3-222	ENST00000565481	SLC4A3	P48751	1232 aa		13.73	□□□□□ -0.21
KIFC3-222	ENST00000565481	IK	Q13123	557 aa	Predicted RBP	13.73	□□□□□ -0.21
KIFC3-222	ENST00000565481	RRP12	Q5JTH9	1297 aa	Known RBP	13.73	□□□□□ -0.21
KIFC3-222	ENST00000565481	CWC27	Q6UX04	472 aa	Known RBP	13.73	□□□□□ -0.21
KIFC3-222	ENST00000565481	RNF180	Q86T96	592 aa		13.73	□□□□□ -0.21
KIFC3-222	ENST00000565481	LENG1	Q96BZ8	264 aa	Predicted RBP	13.73	□□□□□ -0.21
KIFC3-222	ENST00000565481	TSEN34	Q9BSV6	310 aa	Known RBP	13.73	□□□□□ -0.21
KIFC3-222	ENST00000565481	DSCC1	Q9BVC3	393 aa		13.73	□□□□□ -0.21
KIFC3-222	ENST00000565481	RANBP17	Q9H2T7	1088 aa	Known RBP	13.73	□□□□□ -0.21
KIFC3-222	ENST00000565481	ABHD16B	Q9H3Z7	469 aa		13.73	□□□□□ -0.21
KIFC3-222	ENST00000565481	HOMER2	Q9NSB8	354 aa		13.73	□□□□□ -0.21
KIFC3-222	ENST00000565481	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.73	□□□□□ -0.21
KIFC3-222	ENST00000565481	ISY1	Q9ULR0	285 aa	Known RBP	13.73	□□□□□ -0.21
KIFC3-222	ENST00000565481	COL6A3	P12111	3177 aa		13.73	□□□□□ -0.21
KIFC3-222	ENST00000565481	ADCY6	O43306	1168 aa		13.72	□□□□□ -0.21
KIFC3-222	ENST00000565481	DUSP11	O75319	330 aa	Known RBP	13.72	□□□□□ -0.21
KIFC3-222	ENST00000565481	ICAM1	P05362	532 aa		13.72	□□□□□ -0.21
KIFC3-222	ENST00000565481	PDHB	P11177	359 aa		13.72	□□□□□ -0.21
KIFC3-222	ENST00000565481	CNTN2	Q02246	1040 aa		13.72	□□□□□ -0.21
KIFC3-222	ENST00000565481	ACVR2B	Q13705	512 aa		13.72	□□□□□ -0.21
KIFC3-222	ENST00000565481	LRIT3	Q3SXY7	679 aa		13.72	□□□□□ -0.21
KIFC3-222	ENST00000565481	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.72	□□□□□ -0.21
KIFC3-222	ENST00000565481	TTBK2	Q6IQ55	1244 aa		13.72	□□□□□ -0.21
KIFC3-222	ENST00000565481	ARMCX2	Q7L311	632 aa		13.72	□□□□□ -0.21
KIFC3-222	ENST00000565481	TDH	Q8IZJ6	230 aa		13.72	□□□□□ -0.21
KIFC3-222	ENST00000565481	KLHDC9	Q8NEP7	349 aa		13.72	□□□□□ -0.21
KIFC3-222	ENST00000565481	CHMP4C	Q96CF2	233 aa		13.72	□□□□□ -0.21
KIFC3-222	ENST00000565481	TRERF1	Q96PN7	1200 aa		13.72	□□□□□ -0.21
KIFC3-222	ENST00000565481	FAM184B	Q9ULE4	1060 aa		13.72	□□□□□ -0.21
KIFC3-222	ENST00000565481	ASTN1	O14525	1302 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481		A0A1W2PQ45	241 aa	Predicted RBP	13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481		A0A1W2PQY0	241 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	SOWAHB	A6NEL2	793 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	POTEB2	H3BUK9	544 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	ZNF213	O14771	459 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	ALAS1	P13196	640 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	GSPT1	P15170	499 aa	Known RBP	13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	CST5	P28325	142 aa	Predicted RBP	13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	SNAP25	P60880	206 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	CCDC96	Q2M329	555 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	TRIM60	Q495X7	471 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	MUM1L1	Q5H9M0	696 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	TTC22	Q5TAA0	569 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	SYDE2	Q5VT97	1194 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	GPR153	Q6NV75	609 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	CCDC174	Q6PII3	467 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	DGKH	Q86XP1	1220 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	CCDC144CP	Q8IYA2	1237 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	ESR2	Q92731	530 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	FERMT2	Q96AC1	680 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	UBE2O	Q9C0C9	1292 aa	Known RBP	13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	UPF3A	Q9H1J1	476 aa	Known RBP	13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	IL25	Q9H293	177 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	CYP39A1	Q9NYL5	469 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	ATP11B	Q9Y2G3	1177 aa		13.71	□□□□□ -0.21
KIFC3-222	ENST00000565481	MYCN	P04198	464 aa	Predicted RBP	13.7	□□□□□ -0.22
KIFC3-222	ENST00000565481	SLC16A2	P36021	539 aa		13.7	□□□□□ -0.22
KIFC3-222	ENST00000565481	NKX3-2	P78367	333 aa		13.7	□□□□□ -0.22
KIFC3-222	ENST00000565481	MDM2	Q00987	491 aa	Predicted RBP	13.7	□□□□□ -0.22
KIFC3-222	ENST00000565481	ZNF543	Q08ER8	600 aa		13.7	□□□□□ -0.22
KIFC3-222	ENST00000565481	CCDC144B	Q3MJ40	725 aa		13.7	□□□□□ -0.22
KIFC3-222	ENST00000565481	ANKS1A	Q92625	1134 aa		13.7	□□□□□ -0.22
KIFC3-222	ENST00000565481	LRCH3	Q96II8	777 aa		13.7	□□□□□ -0.22
KIFC3-222	ENST00000565481	PDLIM7	Q9NR12	457 aa		13.7	□□□□□ -0.22
KIFC3-222	ENST00000565481	CCPG1	Q9ULG6	757 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms