RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 RBSNQ9H1K0 784 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 RMI1Q9H9A7 625 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 CHST12Q9NRB3 414 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 GINM1Q9NU53 330 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 DMGDHQ9UI17 866 aaKnown RBP5.95□□□□□ -1.46
CAPN3-214ENST00000565274 TTF2Q9UNY4 1162 aaKnown RBP5.95□□□□□ -1.46
CAPN3-214ENST00000565274 R3HCC1Q9Y3T6 440 aaKnown RBP5.95□□□□□ -1.46
CAPN3-214ENST00000565274 USP42Q9H9J4 1324 aaKnown RBP5.95□□□□□ -1.46
CAPN3-214ENST00000565274 NCAPD2Q15021 1401 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 PALM3A6NDB9 673 aaPredicted RBP5.94□□□□□ -1.46
CAPN3-214ENST00000565274 GNAT3A8MTJ3 354 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 BOLA2-SMG1P6H3BVE0 249 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 SLC27A2O14975 620 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 C21orf2O43822 256 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 RNASEH2AO75792 299 aaKnown RBP5.94□□□□□ -1.46
CAPN3-214ENST00000565274 BBOX1O75936 387 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 CPB1P15086 417 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 RPL17P18621 184 aaKnown RBP5.94□□□□□ -1.46
CAPN3-214ENST00000565274 NFKB1P19838 968 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 ENPP1P22413 925 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 HOXD10P28358 340 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 STIP1P31948 543 aaKnown RBP5.94□□□□□ -1.46
CAPN3-214ENST00000565274 TSPAN7P41732 249 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 HIRAP54198 1017 aaPredicted RBP5.94□□□□□ -1.46
CAPN3-214ENST00000565274 LRP8Q14114 963 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 LRCH2Q5VUJ6 765 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 ARHGEF25Q86VW2 580 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 KRTAP1-3Q8IUG1 177 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 CHPFQ8IZ52 775 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 FMR1NBQ8N0W7 255 aaPredicted RBP5.94□□□□□ -1.46
CAPN3-214ENST00000565274 NEK9Q8TD19 979 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 CENPTQ96BT3 561 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 ERP27Q96DN0 273 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 CDHR1Q96JP9 859 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 C8orf48Q96LL4 319 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 MMTAG2Q9BU76 263 aaKnown RBP5.94□□□□□ -1.46
CAPN3-214ENST00000565274 STK31Q9BXU1 1019 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 IP6K2Q9UHH9 426 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 TSPYL4Q9UJ04 414 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 NAGPAQ9UK23 515 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 MAFFQ9ULX9 164 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 LZTS1Q9Y250 596 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 CACNA1FO60840 1977 aa5.94□□□□□ -1.46
CAPN3-214ENST00000565274 XRN1Q8IZH2 1706 aaKnown RBP5.94□□□□□ -1.46
CAPN3-214ENST00000565274 PLEKHG2Q9H7P9 1386 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 OVOS2A0A0G2JMS6 1433 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 TMEM110-MUSTN1A8MSY1 372 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 GOLGA6L6A8MZA4 724 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 PPFIA2O75334 1257 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 ECEL1O95672 775 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 CCDC159P0C7I6 412 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 CHMLP26374 656 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 HOXC9P31274 260 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 TAGLNQ01995 201 aaKnown RBP5.93□□□□□ -1.46
CAPN3-214ENST00000565274 MTX1Q13505 466 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 SEPT2Q15019 361 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 FXNQ16595 210 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 KRT24Q2M2I5 525 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 ARMC3Q5W041 872 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 ZNF746Q6NUN9 644 aaPredicted RBP5.93□□□□□ -1.46
CAPN3-214ENST00000565274 NFXL1Q6ZNB6 911 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 G2E3Q7L622 706 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 KRT25Q7Z3Z0 450 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 FAM35AQ86V20 835 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 SUGP1Q8IWZ8 645 aaKnown RBP5.93□□□□□ -1.46
CAPN3-214ENST00000565274 IL17REQ8NFR9 667 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 GPT2Q8TD30 523 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 OTUD7AQ8TE49 926 aaPredicted RBP5.93□□□□□ -1.46
CAPN3-214ENST00000565274 TEKT1Q969V4 418 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 UCN2Q96RP3 112 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 CEP89Q96ST8 783 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 GSX2Q9BZM3 304 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 LRRCC1Q9C099 1032 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 PDGFDQ9GZP0 370 aaPredicted RBP5.93□□□□□ -1.46
CAPN3-214ENST00000565274 USP44Q9H0E7 712 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 AS3MTQ9HBK9 375 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 BRMS1Q9HCU9 246 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 CLIC5Q9NZA1 410 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 ASAP1Q9ULH1 1129 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 ZDHHC9Q9Y397 364 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 N4BP2Q86UW6 1770 aaPredicted RBP5.93□□□□□ -1.46
CAPN3-214ENST00000565274 MED1Q15648 1581 aaPredicted RBP5.93□□□□□ -1.46
CAPN3-214ENST00000565274 MAP3K5Q99683 1374 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 HEG1Q9ULI3 1381 aa5.93□□□□□ -1.46
CAPN3-214ENST00000565274 MST1RQ04912 1400 aa5.92□□□□□ -1.46
CAPN3-214ENST00000565274 CCP110O43303 1012 aa5.92□□□□□ -1.46
CAPN3-214ENST00000565274 ATP9BO43861 1147 aa5.92□□□□□ -1.46
CAPN3-214ENST00000565274 TRIM37O94972 964 aa5.92□□□□□ -1.46
CAPN3-214ENST00000565274 SETSIPP0DME0 302 aa5.92□□□□□ -1.46
CAPN3-214ENST00000565274 MX1P20591 662 aa5.92□□□□□ -1.46
CAPN3-214ENST00000565274 HOXC13P31276 330 aa5.92□□□□□ -1.46
CAPN3-214ENST00000565274 IREB2P48200 963 aaKnown RBP5.92□□□□□ -1.46
CAPN3-214ENST00000565274 ZBED6P86452 979 aa5.92□□□□□ -1.46
CAPN3-214ENST00000565274 MLLT1Q03111 559 aaPredicted RBP5.92□□□□□ -1.46
CAPN3-214ENST00000565274 RAD51AP2Q09MP3 1159 aa5.92□□□□□ -1.46
CAPN3-214ENST00000565274 CCINQ13939 588 aa5.92□□□□□ -1.46
CAPN3-214ENST00000565274 ENOX2Q16206 610 aaKnown RBP5.92□□□□□ -1.46
CAPN3-214ENST00000565274 DNAJC21Q5F1R6 531 aaKnown RBP5.92□□□□□ -1.46
CAPN3-214ENST00000565274 RNF187Q5TA31 235 aaPredicted RBP5.92□□□□□ -1.46
CAPN3-214ENST00000565274 LCA5Q86VQ0 697 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms