RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 TMEM232C9JQI7 657 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 CTAGE5O15320 804 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 NMT2O60551 498 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 PLA2G6O60733 806 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 FGRP09769 529 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 FDX1P10109 184 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 MCCP23508 829 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 CDK7P50613 346 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 CNTN2Q02246 1040 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 CTDSPL2Q05D32 466 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 KCNA10Q16322 511 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 VPS53Q5VIR6 699 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 ANKRD35Q8N283 1001 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 FAM133AQ8N9E0 248 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 STAG1Q8WVM7 1258 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 GMCL1Q96IK5 515 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 AGBL1Q96MI9 1066 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 TOX2Q96NM4 488 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 ABHD16BQ9H3Z7 469 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-213ENST00000565173 FBXO40Q9UH90 709 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 ANAPC4Q9UJX5 808 aa10.2□□□□□ -0.78
CAPN3-213ENST00000565173 ASTN1O14525 1302 aa10.19□□□□□ -0.78
CAPN3-213ENST00000565173 SOWAHBA6NEL2 793 aa10.19□□□□□ -0.78
CAPN3-213ENST00000565173 MOXD2PA6NHM9 499 aa10.19□□□□□ -0.78
CAPN3-213ENST00000565173 PQBP1O60828 265 aaKnown RBP10.19□□□□□ -0.78
CAPN3-213ENST00000565173 SLC3A2P08195 630 aaKnown RBP10.19□□□□□ -0.78
CAPN3-213ENST00000565173 CST5P28325 142 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-213ENST00000565173 STAT2P52630 851 aa10.19□□□□□ -0.78
CAPN3-213ENST00000565173 RRP1P56182 461 aaKnown RBP10.19□□□□□ -0.78
CAPN3-213ENST00000565173 GJA9P57773 515 aa10.19□□□□□ -0.78
CAPN3-213ENST00000565173 NKX3-2P78367 333 aa10.19□□□□□ -0.78
CAPN3-213ENST00000565173 ALX1Q15699 326 aa10.19□□□□□ -0.78
CAPN3-213ENST00000565173 CCDC144BQ3MJ40 725 aa10.19□□□□□ -0.78
CAPN3-213ENST00000565173 RASGRP2Q7LDG7 609 aa10.19□□□□□ -0.78
CAPN3-213ENST00000565173 CCDC144CPQ8IYA2 1237 aa10.19□□□□□ -0.78
CAPN3-213ENST00000565173 CHURC1Q8WUH1 139 aa10.19□□□□□ -0.78
CAPN3-213ENST00000565173 NUP133Q8WUM0 1156 aa10.19□□□□□ -0.78
CAPN3-213ENST00000565173 CHMP4CQ96CF2 233 aa10.19□□□□□ -0.78
CAPN3-213ENST00000565173 FAM161BQ96MY7 647 aa10.19□□□□□ -0.78
CAPN3-213ENST00000565173 UPF3AQ9H1J1 476 aaKnown RBP10.19□□□□□ -0.78
CAPN3-213ENST00000565173 SEMA6BQ9H3T3 888 aa10.19□□□□□ -0.78
CAPN3-213ENST00000565173 A1CFQ9NQ94 594 aaKnown RBP10.19□□□□□ -0.78
CAPN3-213ENST00000565173 HOMER2Q9NSB8 354 aa10.19□□□□□ -0.78
CAPN3-213ENST00000565173 TMEM39AQ9NV64 488 aa10.19□□□□□ -0.78
CAPN3-213ENST00000565173 ZHX1Q9UKY1 873 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-213ENST00000565173 CTDP1Q9Y5B0 961 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-213ENST00000565173 ELP1O95163 1332 aa10.18□□□□□ -0.78
CAPN3-213ENST00000565173 SLC1A4P43007 532 aa10.18□□□□□ -0.78
CAPN3-213ENST00000565173 PDE1AP54750 535 aa10.18□□□□□ -0.78
CAPN3-213ENST00000565173 SNAP25P60880 206 aa10.18□□□□□ -0.78
CAPN3-213ENST00000565173 SMAD3P84022 425 aaKnown RBP10.18□□□□□ -0.78
CAPN3-213ENST00000565173 ANKRD45Q5TZF3 282 aa10.18□□□□□ -0.78
CAPN3-213ENST00000565173 RCSD1Q6JBY9 416 aa10.18□□□□□ -0.78
CAPN3-213ENST00000565173 KCTD1Q719H9 257 aa10.18□□□□□ -0.78
CAPN3-213ENST00000565173 ARMCX2Q7L311 632 aa10.18□□□□□ -0.78
CAPN3-213ENST00000565173 FAM160B2Q86V87 743 aa10.18□□□□□ -0.78
CAPN3-213ENST00000565173 EVI5LQ96CN4 794 aa10.18□□□□□ -0.78
CAPN3-213ENST00000565173 CRBNQ96SW2 442 aa10.18□□□□□ -0.78
CAPN3-213ENST00000565173 TTYH1Q9H313 450 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-213ENST00000565173 ACAD9Q9H845 621 aa10.18□□□□□ -0.78
CAPN3-213ENST00000565173 STARD7Q9NQZ5 370 aa10.18□□□□□ -0.78
CAPN3-213ENST00000565173 TBX21Q9UL17 535 aa10.18□□□□□ -0.78
CAPN3-213ENST00000565173 MUC3AQ02505 3323 aa10.18□□□□□ -0.78
CAPN3-213ENST00000565173 CUL9Q8IWT3 2517 aa10.17□□□□□ -0.78
CAPN3-213ENST00000565173 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-213ENST00000565173 TSPY2A6NKD2 308 aa10.17□□□□□ -0.78
CAPN3-213ENST00000565173 DCDC2CA8MYV0 355 aa10.17□□□□□ -0.78
CAPN3-213ENST00000565173 ORC4O43929 436 aa10.17□□□□□ -0.78
CAPN3-213ENST00000565173 TIMP1P01033 207 aa10.17□□□□□ -0.78
CAPN3-213ENST00000565173 FGAP02671 866 aa10.17□□□□□ -0.78
CAPN3-213ENST00000565173 ASGR1P07306 291 aa10.17□□□□□ -0.78
CAPN3-213ENST00000565173 C6orf222P0C671 652 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-213ENST00000565173 RAG1P15918 1043 aa10.17□□□□□ -0.78
CAPN3-213ENST00000565173 HDAC1Q13547 482 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-213ENST00000565173 MUM1L1Q5H9M0 696 aa10.17□□□□□ -0.78
CAPN3-213ENST00000565173 PPP4R3BQ5MIZ7 849 aa10.17□□□□□ -0.78
CAPN3-213ENST00000565173 ZNF697Q5TEC3 545 aa10.17□□□□□ -0.78
CAPN3-213ENST00000565173 FAM227BQ96M60 508 aa10.17□□□□□ -0.78
CAPN3-213ENST00000565173 TRERF1Q96PN7 1200 aa10.17□□□□□ -0.78
CAPN3-213ENST00000565173 CDX2Q99626 313 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-213ENST00000565173 HELLSQ9NRZ9 838 aa10.17□□□□□ -0.78
CAPN3-213ENST00000565173 RNF146Q9NTX7 359 aa10.17□□□□□ -0.78
CAPN3-213ENST00000565173 PRR12Q9ULL5 1215 aa10.17□□□□□ -0.78
CAPN3-213ENST00000565173 STX8Q9UNK0 236 aa10.17□□□□□ -0.78
CAPN3-213ENST00000565173 DDX49Q9Y6V7 483 aaKnown RBP10.17□□□□□ -0.78
CAPN3-213ENST00000565173 MCM3APO60318 1980 aa10.17□□□□□ -0.78
CAPN3-213ENST00000565173 A0A0D9SFI3 127 aa10.16□□□□□ -0.78
CAPN3-213ENST00000565173 ARVCFO00192 962 aa10.16□□□□□ -0.78
CAPN3-213ENST00000565173 RANBP6O60518 1105 aaKnown RBP10.16□□□□□ -0.78
CAPN3-213ENST00000565173 ALAS1P13196 640 aa10.16□□□□□ -0.78
CAPN3-213ENST00000565173 PTGS1P23219 599 aa10.16□□□□□ -0.78
CAPN3-213ENST00000565173 FPGSQ05932 587 aa10.16□□□□□ -0.78
CAPN3-213ENST00000565173 TKFCQ3LXA3 575 aa10.16□□□□□ -0.78
CAPN3-213ENST00000565173 GNASQ5JWF2 1037 aa10.16□□□□□ -0.78
CAPN3-213ENST00000565173 TMEM63BQ5T3F8 832 aa10.16□□□□□ -0.78
CAPN3-213ENST00000565173 TAPT1Q6NXT6 567 aa10.16□□□□□ -0.78
CAPN3-213ENST00000565173 BTNL9Q6UXG8 535 aa10.16□□□□□ -0.78
CAPN3-213ENST00000565173 C16orf59Q7L2K0 433 aa10.16□□□□□ -0.78
CAPN3-213ENST00000565173 ZNF589Q86UQ0 364 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms