RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	hCG_1642624	A0A1W2PR95	340 aa		11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	ESYT2	A0FGR8	921 aa		11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	FAM155A	B1AL88	458 aa	Predicted RBP	11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	STXBP3	O00186	592 aa		11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	PPP1R11	O60927	126 aa	Predicted RBP	11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	XBP1	P17861	261 aa		11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	DSG3	P32926	999 aa		11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	MAP2K2	P36507	400 aa		11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	ZNF157	P51786	506 aa	Predicted RBP	11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	NUCB2	P80303	420 aa		11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	NOG	Q13253	232 aa		11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	WWC2	Q6AWC2	1192 aa		11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	GPAT2	Q6NUI2	795 aa		11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	GADL1	Q6ZQY3	521 aa		11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	HOMER1	Q86YM7	354 aa		11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	TEX2	Q8IWB9	1127 aa		11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	REPS2	Q8NFH8	660 aa		11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	CCDC148	Q8NFR7	591 aa		11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	BRI3BP	Q8WY22	251 aa		11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	CHMP5	Q9NZZ3	219 aa		11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	PNMA2	Q9UL42	364 aa		11.36	□□□□□ -0.59
SIN3A-205	ENST00000564778	CCL15-CCL14	A0A0B4J2E2	113 aa		11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	OAZ1	P54368	228 aa		11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	TRAF1	Q13077	416 aa		11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	PKP1	Q13835	747 aa		11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	COG2	Q14746	738 aa		11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	CCL15	Q16663	113 aa		11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	KRT40	Q6A162	431 aa		11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	TYW1B	Q6NUM6	668 aa		11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	HEATR3	Q7Z4Q2	680 aa		11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	ANKRD23	Q86SG2	305 aa		11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	CCDC102A	Q96A19	550 aa		11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	KIFC2	Q96AC6	838 aa		11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	ATG4C	Q96DT6	458 aa		11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	PHF20	Q9BVI0	1012 aa		11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	AMN	Q9BXJ7	453 aa		11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	VAT1L	Q9HCJ6	419 aa		11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	ZCCHC17	Q9NP64	241 aa	Known RBP	11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	WBP1L	Q9NX94	342 aa		11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	VPS54	Q9P1Q0	977 aa		11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	ZDHHC9	Q9Y397	364 aa		11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	COL11A1	P12107	1806 aa	Predicted RBP	11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	ZNF536	O15090	1300 aa		11.35	□□□□□ -0.59
SIN3A-205	ENST00000564778	MANSC4	A6NHS7	340 aa	Predicted RBP	11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778		H3BQV1	296 aa		11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778	VWA5A	O00534	786 aa		11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778	ATP2A1	O14983	1001 aa		11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778	MMP1	P03956	469 aa		11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778	ICAM1	P05362	532 aa		11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778	ZSCAN22	P10073	491 aa	Predicted RBP	11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778	CTCF	P49711	727 aa	Predicted RBP	11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778	TRIM29	Q14134	588 aa		11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778	NPY5R	Q15761	445 aa		11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778	IFFO2	Q5TF58	517 aa		11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778	GALNT17	Q6IS24	598 aa		11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778	MB21D1	Q8N884	522 aa		11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778	DAGLB	Q8NCG7	672 aa		11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778	PIBF1	Q8WXW3	757 aa		11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778	ZMYND12	Q9H0C1	365 aa		11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778	GJB4	Q9NTQ9	266 aa		11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778	HOXC10	Q9NYD6	342 aa		11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778	PNMA3	Q9UL41	463 aa		11.34	□□□□□ -0.59
SIN3A-205	ENST00000564778	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.33	□□□□□ -0.59
SIN3A-205	ENST00000564778	VPS37C	A5D8V6	355 aa	Predicted RBP	11.33	□□□□□ -0.6
SIN3A-205	ENST00000564778	BTBD19	C9JJ37	291 aa		11.33	□□□□□ -0.6
SIN3A-205	ENST00000564778	CA12	O43570	354 aa		11.33	□□□□□ -0.6
SIN3A-205	ENST00000564778	ZBED4	O75132	1171 aa		11.33	□□□□□ -0.6
SIN3A-205	ENST00000564778	CALML3	P27482	149 aa		11.33	□□□□□ -0.6
SIN3A-205	ENST00000564778	NAPA	P54920	295 aa		11.33	□□□□□ -0.6
SIN3A-205	ENST00000564778	IRX3	P78415	501 aa	Predicted RBP	11.33	□□□□□ -0.6
SIN3A-205	ENST00000564778	KIF23	Q02241	960 aa	Predicted RBP	11.33	□□□□□ -0.6
SIN3A-205	ENST00000564778	GHRHR	Q02643	423 aa		11.33	□□□□□ -0.6
SIN3A-205	ENST00000564778	MKRN3	Q13064	507 aa	Known RBP	11.33	□□□□□ -0.6
SIN3A-205	ENST00000564778	OTUD7B	Q6GQQ9	843 aa		11.33	□□□□□ -0.6
SIN3A-205	ENST00000564778	FBXO11	Q86XK2	927 aa		11.33	□□□□□ -0.6
SIN3A-205	ENST00000564778	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.33	□□□□□ -0.6
SIN3A-205	ENST00000564778	ZNF214	Q9UL59	606 aa	Predicted RBP	11.33	□□□□□ -0.6
SIN3A-205	ENST00000564778	PCDHA1	Q9Y5I3	950 aa		11.33	□□□□□ -0.6
SIN3A-205	ENST00000564778	ABCB11	O95342	1321 aa		11.33	□□□□□ -0.6
SIN3A-205	ENST00000564778	SMCHD1	A6NHR9	2005 aa		11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	FOXN1	O15353	648 aa		11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	AOC2	O75106	756 aa		11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	F13A1	P00488	732 aa		11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	OSBP	P22059	807 aa		11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	U2AF2	P26368	475 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	FOSB	P53539	338 aa		11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	INHBE	P58166	350 aa		11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	HERVK_113	P62684	666 aa		11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	GUCY1B3	Q02153	619 aa		11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	REST	Q13127	1097 aa		11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	SAFB	Q15424	915 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	CCDC174	Q6PII3	467 aa		11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	POTEE	Q6S8J3	1075 aa		11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	DIS3L2	Q8IYB7	885 aa	Known RBP	11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms