RNA–Protein interactions for RNA: ENST00000564594.1

HMGN2P46-206, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, human

TSL 4

Gene HMGN2P46, Length 572 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN2P46-206	ENST00000564594	KBTBD3	Q8NAB2	608 aa		12.53	□□□□□ -0.4
HMGN2P46-206	ENST00000564594	USP38	Q8NB14	1042 aa		12.53	□□□□□ -0.4
HMGN2P46-206	ENST00000564594	GLT1D1	Q96MS3	346 aa		12.53	□□□□□ -0.4
HMGN2P46-206	ENST00000564594	KATNBL1	Q9H079	304 aa		12.53	□□□□□ -0.4
HMGN2P46-206	ENST00000564594	MKNK2	Q9HBH9	465 aa		12.53	□□□□□ -0.4
HMGN2P46-206	ENST00000564594	CLIP2	Q9UDT6	1046 aa		12.53	□□□□□ -0.4
HMGN2P46-206	ENST00000564594	SYNPO2	Q9UMS6	1093 aa		12.53	□□□□□ -0.4
HMGN2P46-206	ENST00000564594	MINDY4B	A8MYZ0	360 aa		12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	SMARCA5	O60264	1052 aa	Predicted RBP	12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	ZBED4	O75132	1171 aa		12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	ASGR1	P07306	291 aa		12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	C6orf222	P0C671	652 aa	Predicted RBP	12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	OAZ1	P54368	228 aa		12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	CCDC144B	Q3MJ40	725 aa		12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	TMEM240	Q5SV17	173 aa		12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	PCSK9	Q8NBP7	692 aa	Known RBP	12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	GMCL1P1	Q8NEA9	526 aa		12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	CHST13	Q8NET6	341 aa		12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	APPBP2	Q92624	585 aa		12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	TIFA	Q96CG3	184 aa		12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	CEP95	Q96GE4	821 aa		12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	ABHD16B	Q9H3Z7	469 aa		12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	CHMP4B	Q9H444	224 aa	Known RBP	12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	ZNF576	Q9H609	170 aa		12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	RAVER2	Q9HCJ3	691 aa	Known RBP	12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	ECHDC1	Q9NTX5	307 aa		12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	MTMR4	Q9NYA4	1195 aa		12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	FBXO40	Q9UH90	709 aa		12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	FEM1B	Q9UK73	627 aa		12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	MROH7	Q68CQ1	1323 aa		12.52	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	MYH4	Q9Y623	1939 aa		12.51	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	TRANK1	O15050	2925 aa		12.51	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	ARVCF	O00192	962 aa		12.51	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	GPAA1	O43292	621 aa		12.51	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	PPIG	Q13427	754 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	ARMCX2	Q7L311	632 aa		12.51	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	FAM126B	Q8IXS8	530 aa		12.51	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	STK11IP	Q8N1F8	1099 aa		12.51	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	PLCD3	Q8N3E9	789 aa		12.51	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	KIFC2	Q96AC6	838 aa		12.51	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	SPC25	Q9HBM1	224 aa		12.51	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	PRDM6	Q9NQX0	595 aa		12.51	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	PLIN4	Q96Q06	1357 aa		12.51	□□□□□ -0.41
HMGN2P46-206	ENST00000564594		A0A0U1RQG5	324 aa	Predicted RBP	12.5	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	RNF113A	O15541	343 aa	Known RBP	12.5	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	PRDM1	O75626	825 aa		12.5	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	TTLL1	O95922	423 aa		12.5	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	CD4	P01730	458 aa		12.5	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	CSF2RA	P15509	400 aa		12.5	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	PBX2	P40425	430 aa		12.5	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	SLC4A3	P48751	1232 aa		12.5	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	GNAS	Q5JWF2	1037 aa		12.5	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	CCDC174	Q6PII3	467 aa		12.5	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	CCDC144CP	Q8IYA2	1237 aa		12.5	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	LRRC47	Q8N1G4	583 aa	Known RBP	12.5	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	ANKRD35	Q8N283	1001 aa		12.5	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	FAM133A	Q8N9E0	248 aa		12.5	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	SLC43A3	Q8NBI5	491 aa		12.5	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	SYMPK	Q92797	1274 aa	Known RBP	12.5	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	PBX4	Q9BYU1	374 aa		12.5	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	ASTN1	O14525	1302 aa		12.5	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	GRXCR1	A8MXD5	290 aa		12.49	□□□□□ -0.41
HMGN2P46-206	ENST00000564594		M0R2C6	588 aa		12.49	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	ZFY	P08048	801 aa	Predicted RBP	12.49	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	FDX1	P10109	184 aa		12.49	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	GNAT2	P19087	354 aa		12.49	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	TDO2	P48775	406 aa		12.49	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	CNTN2	Q02246	1040 aa		12.49	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	TJAP1	Q5JTD0	557 aa		12.49	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	ZNF365	Q70YC5	407 aa		12.49	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	ZNF444	Q8N0Y2	327 aa	Predicted RBP	12.49	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	NEDD1	Q8NHV4	660 aa		12.49	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	ZNF287	Q9HBT7	754 aa		12.49	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	A1CF	Q9NQ94	594 aa	Known RBP	12.49	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	CTDP1	Q9Y5B0	961 aa	Predicted RBP	12.49	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	ZNF536	O15090	1300 aa		12.48	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	12.48	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	SOWAHB	A6NEL2	793 aa		12.48	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	PATL2	C9JE40	543 aa	Known RBP	12.48	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	BMP3	P12645	472 aa		12.48	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	AKNAD1	Q5T1N1	836 aa		12.48	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	C20orf194	Q5TEA3	1177 aa		12.48	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	TSHZ3	Q63HK5	1081 aa		12.48	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	SLFN13	Q68D06	897 aa		12.48	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	PSRC1	Q6PGN9	363 aa	Predicted RBP	12.48	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	IFNL3	Q8IZI9	196 aa		12.48	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	TMEM199	Q8N511	208 aa		12.48	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	HERVK_113	Q902F9	699 aa		12.48	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	VTI1A	Q96AJ9	217 aa		12.48	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	GMCL1	Q96IK5	515 aa		12.48	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	ACAD9	Q9H845	621 aa		12.48	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	HOMER2	Q9NSB8	354 aa		12.48	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	GNE	Q9Y223	722 aa	Known RBP	12.48	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	GRIN2D	O15399	1336 aa		12.47	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	TMEM232	C9JQI7	657 aa		12.47	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	TLR3	O15455	904 aa	Known RBP	12.47	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	PLA2G6	O60733	806 aa		12.47	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	ACR	P10323	421 aa		12.47	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	CYP2C18	P33260	490 aa		12.47	□□□□□ -0.41
HMGN2P46-206	ENST00000564594	STAT2	P52630	851 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms