RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 SYDE2Q5VT97 1194 aa17.75■□□□□ 0.43
COMMD4-210ENST00000564587 SASS6Q6UVJ0 657 aa17.75■□□□□ 0.43
COMMD4-210ENST00000564587 FAM160B2Q86V87 743 aa17.75■□□□□ 0.43
COMMD4-210ENST00000564587 PYM1Q9BRP8 204 aaKnown RBP17.75■□□□□ 0.43
COMMD4-210ENST00000564587 RIC8AQ9NPQ8 531 aa17.75■□□□□ 0.43
COMMD4-210ENST00000564587 RNF181Q9P0P0 153 aa17.75■□□□□ 0.43
COMMD4-210ENST00000564587 A0A1W2PRG0 241 aa17.74■□□□□ 0.43
COMMD4-210ENST00000564587 USP17L10C9JJH3 530 aa17.74■□□□□ 0.43
COMMD4-210ENST00000564587 ZNF202O95125 648 aa17.74■□□□□ 0.43
COMMD4-210ENST00000564587 XRCC6P12956 609 aaKnown RBP eCLIP17.74■□□□□ 0.43
COMMD4-210ENST00000564587 PFKFB1P16118 471 aa17.74■□□□□ 0.43
COMMD4-210ENST00000564587 SYKP43405 635 aa17.74■□□□□ 0.43
COMMD4-210ENST00000564587 NDUFA8P51970 172 aa17.74■□□□□ 0.43
COMMD4-210ENST00000564587 SHROOM1Q2M3G4 852 aaPredicted RBP17.74■□□□□ 0.43
COMMD4-210ENST00000564587 UVSSAQ2YD98 709 aa17.74■□□□□ 0.43
COMMD4-210ENST00000564587 ANGEL2Q5VTE6 544 aaKnown RBP17.74■□□□□ 0.43
COMMD4-210ENST00000564587 CUL5Q93034 780 aa17.74■□□□□ 0.43
COMMD4-210ENST00000564587 NAP1L4Q99733 375 aaKnown RBP17.74■□□□□ 0.43
COMMD4-210ENST00000564587 SDF4Q9BRK5 362 aa17.74■□□□□ 0.43
COMMD4-210ENST00000564587 FUCA2Q9BTY2 467 aa17.74■□□□□ 0.43
COMMD4-210ENST00000564587 AMNQ9BXJ7 453 aa17.74■□□□□ 0.43
COMMD4-210ENST00000564587 ADARB2Q9NS39 739 aaKnown RBP17.74■□□□□ 0.43
COMMD4-210ENST00000564587 HOOK1Q9UJC3 728 aaKnown RBP17.74■□□□□ 0.43
COMMD4-210ENST00000564587 ZC3H4Q9UPT8 1303 aaKnown RBP17.73■□□□□ 0.43
COMMD4-210ENST00000564587 FAM205CA6NFA0 338 aa17.73■□□□□ 0.43
COMMD4-210ENST00000564587 TMEM232C9JQI7 657 aa17.73■□□□□ 0.43
COMMD4-210ENST00000564587 SLC16A2P36021 539 aa17.73■□□□□ 0.43
COMMD4-210ENST00000564587 STAT2P52630 851 aa17.73■□□□□ 0.43
COMMD4-210ENST00000564587 IKQ13123 557 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-210ENST00000564587 ZNF174Q15697 407 aa17.73■□□□□ 0.43
COMMD4-210ENST00000564587 CDC37Q16543 378 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-210ENST00000564587 CAMK4Q16566 473 aa17.73■□□□□ 0.43
COMMD4-210ENST00000564587 QRICH1Q2TAL8 776 aa17.73■□□□□ 0.43
COMMD4-210ENST00000564587 SUPT20HL1Q3ZLR7 823 aa17.73■□□□□ 0.43
COMMD4-210ENST00000564587 DPY19L2Q6NUT2 758 aa17.73■□□□□ 0.43
COMMD4-210ENST00000564587 SHC4Q6S5L8 630 aa17.73■□□□□ 0.43
COMMD4-210ENST00000564587 LPAR1Q92633 364 aa17.73■□□□□ 0.43
COMMD4-210ENST00000564587 PTGDRQ13258 359 aa17.72■□□□□ 0.43
COMMD4-210ENST00000564587 KANK3Q6NY19 840 aa17.72■□□□□ 0.43
COMMD4-210ENST00000564587 NEK8Q86SG6 692 aa17.72■□□□□ 0.43
COMMD4-210ENST00000564587 CDAN1Q8IWY9 1227 aa17.72■□□□□ 0.43
COMMD4-210ENST00000564587 COA7Q96BR5 231 aa17.72■□□□□ 0.43
COMMD4-210ENST00000564587 RBSNQ9H1K0 784 aa17.72■□□□□ 0.43
COMMD4-210ENST00000564587 AS3MTQ9HBK9 375 aa17.72■□□□□ 0.43
COMMD4-210ENST00000564587 USP25Q9UHP3 1055 aa17.72■□□□□ 0.43
COMMD4-210ENST00000564587 ZNF112Q9UJU3 913 aa17.72■□□□□ 0.43
COMMD4-210ENST00000564587 FEM1BQ9UK73 627 aa17.72■□□□□ 0.43
COMMD4-210ENST00000564587 KCNH3Q9ULD8 1083 aa17.72■□□□□ 0.43
COMMD4-210ENST00000564587 ATAD5Q96QE3 1844 aa17.72■□□□□ 0.43
COMMD4-210ENST00000564587 HSPA6P17066 643 aa17.71■□□□□ 0.43
COMMD4-210ENST00000564587 PRPHP41219 470 aa17.71■□□□□ 0.43
COMMD4-210ENST00000564587 ECE1P42892 770 aa17.71■□□□□ 0.43
COMMD4-210ENST00000564587 USP14P54578 494 aa17.71■□□□□ 0.43
COMMD4-210ENST00000564587 C9orf131Q5VYM1 1079 aa17.71■□□□□ 0.43
COMMD4-210ENST00000564587 FBXO11Q86XK2 927 aa17.71■□□□□ 0.43
COMMD4-210ENST00000564587 TRPM4Q8TD43 1214 aa17.71■□□□□ 0.43
COMMD4-210ENST00000564587 ACER1Q8TDN7 264 aa17.71■□□□□ 0.43
COMMD4-210ENST00000564587 CLIC6Q96NY7 704 aa17.71■□□□□ 0.43
COMMD4-210ENST00000564587 FEZ1Q99689 392 aa17.71■□□□□ 0.43
COMMD4-210ENST00000564587 KIAA1683Q9H0B3 1180 aa17.71■□□□□ 0.43
COMMD4-210ENST00000564587 PSTPIP2Q9H939 334 aa17.71■□□□□ 0.43
COMMD4-210ENST00000564587 PNMA2Q9UL42 364 aa17.71■□□□□ 0.43
COMMD4-210ENST00000564587 PCDHA1Q9Y5I3 950 aa17.71■□□□□ 0.43
COMMD4-210ENST00000564587 GRIN3BO60391 1043 aa17.7■□□□□ 0.42
COMMD4-210ENST00000564587 YBX3P16989 372 aaKnown RBP eCLIP17.7■□□□□ 0.42
COMMD4-210ENST00000564587 MCM7P33993 719 aa17.7■□□□□ 0.42
COMMD4-210ENST00000564587 LONP1P36776 959 aaKnown RBP17.7■□□□□ 0.42
COMMD4-210ENST00000564587 EPS15P42566 896 aa17.7■□□□□ 0.42
COMMD4-210ENST00000564587 TYRO3Q06418 890 aa17.7■□□□□ 0.42
COMMD4-210ENST00000564587 ZRSR1Q15695 479 aaKnown RBP17.7■□□□□ 0.42
COMMD4-210ENST00000564587 INF2Q27J81 1249 aa17.7■□□□□ 0.42
COMMD4-210ENST00000564587 NBPF12Q5TAG4 269 aaPredicted RBP17.7■□□□□ 0.42
COMMD4-210ENST00000564587 RASGRP4Q8TDF6 673 aa17.7■□□□□ 0.42
COMMD4-210ENST00000564587 GGA3Q9NZ52 723 aa17.7■□□□□ 0.42
COMMD4-210ENST00000564587 ASTN2O75129 1339 aaPredicted RBP17.7■□□□□ 0.42
COMMD4-210ENST00000564587 WDR46O15213 610 aaKnown RBP17.69■□□□□ 0.42
COMMD4-210ENST00000564587 PPP1R11O60927 126 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-210ENST00000564587 DDNO94850 711 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-210ENST00000564587 AP3B2Q13367 1082 aa17.69■□□□□ 0.42
COMMD4-210ENST00000564587 NOM1Q5C9Z4 860 aaKnown RBP17.69■□□□□ 0.42
COMMD4-210ENST00000564587 CKAP2LQ8IYA6 745 aa17.69■□□□□ 0.42
COMMD4-210ENST00000564587 SCYL3Q8IZE3 742 aa17.69■□□□□ 0.42
COMMD4-210ENST00000564587 ZNF526Q8TF50 670 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-210ENST00000564587 WDR18Q9BV38 432 aa17.69■□□□□ 0.42
COMMD4-210ENST00000564587 CSRNP2Q9H175 543 aa17.69■□□□□ 0.42
COMMD4-210ENST00000564587 GPBP1L1Q9HC44 474 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-210ENST00000564587 BIN2Q9UBW5 565 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-210ENST00000564587 PRR12Q9ULL5 1215 aa17.69■□□□□ 0.42
COMMD4-210ENST00000564587 CAPN15O75808 1086 aa17.68■□□□□ 0.42
COMMD4-210ENST00000564587 FOSP01100 380 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-210ENST00000564587 GCFC2P16383 781 aaKnown RBP17.68■□□□□ 0.42
COMMD4-210ENST00000564587 TXLNAP40222 546 aa17.68■□□□□ 0.42
COMMD4-210ENST00000564587 CLK2P49760 499 aaKnown RBP17.68■□□□□ 0.42
COMMD4-210ENST00000564587 STX1AQ16623 288 aa17.68■□□□□ 0.42
COMMD4-210ENST00000564587 FAM83BQ5T0W9 1011 aa17.68■□□□□ 0.42
COMMD4-210ENST00000564587 JAKMIP3Q5VZ66 844 aa17.68■□□□□ 0.42
COMMD4-210ENST00000564587 DTHD1Q6ZMT9 781 aa17.68■□□□□ 0.42
COMMD4-210ENST00000564587 KRBA2Q6ZNG9 492 aa17.68■□□□□ 0.42
COMMD4-210ENST00000564587 C4orf32Q8N8J7 132 aa17.68■□□□□ 0.42
COMMD4-210ENST00000564587 TBCKQ8TEA7 893 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms