RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 MCCP23508 829 aa28.3■■■□□ 2.12
NME3-206ENST00000564252 ACVR2BQ13705 512 aa28.3■■■□□ 2.12
NME3-206ENST00000564252 ALX1Q15699 326 aa28.3■■■□□ 2.12
NME3-206ENST00000564252 KLHDC9Q8NEP7 349 aa28.3■■■□□ 2.12
NME3-206ENST00000564252 CHMP4CQ96CF2 233 aa28.3■■■□□ 2.12
NME3-206ENST00000564252 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.3■■■□□ 2.12
NME3-206ENST00000564252 ADCY6O43306 1168 aa28.28■■■□□ 2.12
NME3-206ENST00000564252 ORC4O43929 436 aa28.28■■■□□ 2.12
NME3-206ENST00000564252 DUSP11O75319 330 aaKnown RBP28.28■■■□□ 2.12
NME3-206ENST00000564252 FGRP09769 529 aa28.28■■■□□ 2.12
NME3-206ENST00000564252 NOVP48745 357 aa28.28■■■□□ 2.12
NME3-206ENST00000564252 ACLYP53396 1101 aa28.28■■■□□ 2.12
NME3-206ENST00000564252 IKQ13123 557 aaPredicted RBP28.28■■■□□ 2.12
NME3-206ENST00000564252 CCSAPQ6IQ19 270 aaPredicted RBP28.28■■■□□ 2.12
NME3-206ENST00000564252 KCTD1Q719H9 257 aa28.28■■■□□ 2.12
NME3-206ENST00000564252 RASGRP2Q7LDG7 609 aa28.28■■■□□ 2.12
NME3-206ENST00000564252 FAM227BQ96M60 508 aa28.28■■■□□ 2.12
NME3-206ENST00000564252 AGBL1Q96MI9 1066 aa28.28■■■□□ 2.12
NME3-206ENST00000564252 ABHD16BQ9H3Z7 469 aa28.28■■■□□ 2.12
NME3-206ENST00000564252 ACAD9Q9H845 621 aa28.28■■■□□ 2.12
NME3-206ENST00000564252 A0A0C4DFX4 3053 aa28.27■■■□□ 2.12
NME3-206ENST00000564252 A0A0D9SFI3 127 aa28.27■■■□□ 2.12
NME3-206ENST00000564252 POTEB2H3BUK9 544 aa28.27■■■□□ 2.12
NME3-206ENST00000564252 RANBP6O60518 1105 aaKnown RBP28.27■■■□□ 2.12
NME3-206ENST00000564252 CLTBP09497 229 aa28.27■■■□□ 2.12
NME3-206ENST00000564252 SHHQ15465 462 aa28.27■■■□□ 2.12
NME3-206ENST00000564252 RCSD1Q6JBY9 416 aa28.27■■■□□ 2.12
NME3-206ENST00000564252 ARMCX2Q7L311 632 aa28.27■■■□□ 2.12
NME3-206ENST00000564252 RNF146Q9NTX7 359 aa28.27■■■□□ 2.12
NME3-206ENST00000564252 MYADML2A6NDP7 307 aa28.26■■■□□ 2.11
NME3-206ENST00000564252 ITGB8P26012 769 aa28.26■■■□□ 2.11
NME3-206ENST00000564252 CNTN2Q02246 1040 aa28.26■■■□□ 2.11
NME3-206ENST00000564252 C9orf50Q5SZB4 431 aa28.26■■■□□ 2.11
NME3-206ENST00000564252 TICAM2Q86XR7 235 aa28.26■■■□□ 2.11
NME3-206ENST00000564252 CCDC144CPQ8IYA2 1237 aa28.26■■■□□ 2.11
NME3-206ENST00000564252 FAM133AQ8N9E0 248 aa28.26■■■□□ 2.11
NME3-206ENST00000564252 SLC17A8Q8NDX2 589 aa28.26■■■□□ 2.11
NME3-206ENST00000564252 KATNBL1Q9H079 304 aa28.26■■■□□ 2.11
NME3-206ENST00000564252 A1CFQ9NQ94 594 aaKnown RBP28.26■■■□□ 2.11
NME3-206ENST00000564252 STXBP5LQ9Y2K9 1186 aa28.26■■■□□ 2.11
NME3-206ENST00000564252 MOXD2PA6NHM9 499 aa28.25■■■□□ 2.11
NME3-206ENST00000564252 PQBP1O60828 265 aaKnown RBP28.25■■■□□ 2.11
NME3-206ENST00000564252 FGAP02671 866 aa28.25■■■□□ 2.11
NME3-206ENST00000564252 CST5P28325 142 aaPredicted RBP28.25■■■□□ 2.11
NME3-206ENST00000564252 IRX5P78411 483 aaPredicted RBP28.25■■■□□ 2.11
NME3-206ENST00000564252 KCNA10Q16322 511 aa28.25■■■□□ 2.11
NME3-206ENST00000564252 TKFCQ3LXA3 575 aa28.25■■■□□ 2.11
NME3-206ENST00000564252 CCDC144BQ3MJ40 725 aa28.25■■■□□ 2.11
NME3-206ENST00000564252 MCMDC2Q4G0Z9 681 aa28.25■■■□□ 2.11
NME3-206ENST00000564252 FAM109BQ6ICB4 259 aaPredicted RBP28.25■■■□□ 2.11
NME3-206ENST00000564252 STARD7Q9NQZ5 370 aa28.25■■■□□ 2.11
NME3-206ENST00000564252 PRR12Q9ULL5 1215 aa28.25■■■□□ 2.11
NME3-206ENST00000564252 ANKRD33Q7Z3H0 272 aa28.24■■■□□ 2.11
NME3-206ENST00000564252 NUP133Q8WUM0 1156 aa28.24■■■□□ 2.11
NME3-206ENST00000564252 TRERF1Q96PN7 1200 aa28.24■■■□□ 2.11
NME3-206ENST00000564252 LNPKQ9C0E8 428 aa28.24■■■□□ 2.11
NME3-206ENST00000564252 KIAA0355O15063 1070 aa28.23■■■□□ 2.11
NME3-206ENST00000564252 ALAS1P13196 640 aa28.23■■■□□ 2.11
NME3-206ENST00000564252 SNAP25P60880 206 aa28.23■■■□□ 2.11
NME3-206ENST00000564252 CCDC174Q6PII3 467 aa28.23■■■□□ 2.11
NME3-206ENST00000564252 ZNF589Q86UQ0 364 aaPredicted RBP28.23■■■□□ 2.11
NME3-206ENST00000564252 TOX2Q96NM4 488 aa28.23■■■□□ 2.11
NME3-206ENST00000564252 UPF3AQ9H1J1 476 aaKnown RBP28.23■■■□□ 2.11
NME3-206ENST00000564252 ZMYM6O95789 1325 aa28.22■■■□□ 2.11
NME3-206ENST00000564252 SOWAHBA6NEL2 793 aa28.22■■■□□ 2.11
NME3-206ENST00000564252 HSPD1P10809 573 aaKnown RBP28.22■■■□□ 2.11
NME3-206ENST00000564252 GJA9P57773 515 aa28.22■■■□□ 2.11
NME3-206ENST00000564252 FAAP100Q0VG06 881 aa28.22■■■□□ 2.11
NME3-206ENST00000564252 NMIQ13287 307 aaPredicted RBP28.22■■■□□ 2.11
NME3-206ENST00000564252 AAMPQ13685 434 aa28.22■■■□□ 2.11
NME3-206ENST00000564252 DCAF4Q8WV16 495 aa28.22■■■□□ 2.11
NME3-206ENST00000564252 MTMR7Q9Y216 660 aa28.22■■■□□ 2.11
NME3-206ENST00000564252 LRRC37A2A6NM11 1700 aa28.21■■■□□ 2.11
NME3-206ENST00000564252 C6orf222P0C671 652 aaPredicted RBP28.21■■■□□ 2.11
NME3-206ENST00000564252 SMC5Q8IY18 1101 aa28.21■■■□□ 2.11
NME3-206ENST00000564252 TOMM22Q9NS69 142 aa28.21■■■□□ 2.11
NME3-206ENST00000564252 ASTN1O14525 1302 aa28.2■■■□□ 2.11
NME3-206ENST00000564252 CCDC96Q2M329 555 aa28.2■■■□□ 2.1
NME3-206ENST00000564252 MUM1L1Q5H9M0 696 aa28.2■■■□□ 2.1
NME3-206ENST00000564252 PCSK9Q8NBP7 692 aaKnown RBP28.2■■■□□ 2.1
NME3-206ENST00000564252 GUCD1Q96NT3 240 aa28.2■■■□□ 2.1
NME3-206ENST00000564252 SPC25Q9HBM1 224 aa28.2■■■□□ 2.1
NME3-206ENST00000564252 TMEM39AQ9NV64 488 aa28.2■■■□□ 2.1
NME3-206ENST00000564252 ELP1O95163 1332 aa28.19■■■□□ 2.1
NME3-206ENST00000564252 TRIM6-TRIM34B2RNG4 842 aa28.19■■■□□ 2.1
NME3-206ENST00000564252 CTAGE5O15320 804 aa28.19■■■□□ 2.1
NME3-206ENST00000564252 ASGR1P07306 291 aa28.19■■■□□ 2.1
NME3-206ENST00000564252 RAG1P15918 1043 aa28.19■■■□□ 2.1
NME3-206ENST00000564252 RRP12Q5JTH9 1297 aaKnown RBP28.19■■■□□ 2.1
NME3-206ENST00000564252 GLT1D1Q96MS3 346 aa28.19■■■□□ 2.1
NME3-206ENST00000564252 TMEM47Q9BQJ4 181 aa28.19■■■□□ 2.1
NME3-206ENST00000564252 TCP11L1Q9NUJ3 509 aa28.19■■■□□ 2.1
NME3-206ENST00000564252 CCDC171Q6TFL3 1326 aa28.18■■■□□ 2.1
NME3-206ENST00000564252 LCTP09848 1927 aa28.18■■■□□ 2.1
NME3-206ENST00000564252 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.18■■■□□ 2.1
NME3-206ENST00000564252 ASB14A6NK59 587 aa28.18■■■□□ 2.1
NME3-206ENST00000564252 DCDC2CA8MYV0 355 aa28.18■■■□□ 2.1
NME3-206ENST00000564252 TOP1P11387 765 aaKnown RBP28.18■■■□□ 2.1
NME3-206ENST00000564252 EPHB4P54760 987 aa28.18■■■□□ 2.1
NME3-206ENST00000564252 NKX3-2P78367 333 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms