RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 BADQ92934 168 aa11.29□□□□□ -0.6
CLN6-203ENST00000563917 RILPL2Q969X0 211 aa11.29□□□□□ -0.6
CLN6-203ENST00000563917 CHMP4CQ96CF2 233 aa11.29□□□□□ -0.6
CLN6-203ENST00000563917 TMEM39AQ9NV64 488 aa11.29□□□□□ -0.6
CLN6-203ENST00000563917 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.29□□□□□ -0.6
CLN6-203ENST00000563917 MTMR7Q9Y216 660 aa11.29□□□□□ -0.6
CLN6-203ENST00000563917 MROH7Q68CQ1 1323 aa11.29□□□□□ -0.6
CLN6-203ENST00000563917 DNAJC25-GNG10A0A024R161 153 aa11.28□□□□□ -0.6
CLN6-203ENST00000563917 PLA2G6O60733 806 aa11.28□□□□□ -0.6
CLN6-203ENST00000563917 SNAI1O95863 264 aaPredicted RBP11.28□□□□□ -0.6
CLN6-203ENST00000563917 C6orf222P0C671 652 aaPredicted RBP11.28□□□□□ -0.6
CLN6-203ENST00000563917 ALAS1P13196 640 aa11.28□□□□□ -0.6
CLN6-203ENST00000563917 ACLYP53396 1101 aa11.28□□□□□ -0.6
CLN6-203ENST00000563917 ALX1Q15699 326 aa11.28□□□□□ -0.6
CLN6-203ENST00000563917 ZNF697Q5TEC3 545 aa11.28□□□□□ -0.6
CLN6-203ENST00000563917 KCTD1Q719H9 257 aa11.28□□□□□ -0.6
CLN6-203ENST00000563917 Q7L0L9 218 aa11.28□□□□□ -0.6
CLN6-203ENST00000563917 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.28□□□□□ -0.6
CLN6-203ENST00000563917 ARMCX2Q7L311 632 aa11.28□□□□□ -0.6
CLN6-203ENST00000563917 DCAF4Q8WV16 495 aa11.28□□□□□ -0.6
CLN6-203ENST00000563917 YTHDC1Q96MU7 727 aaKnown RBP11.28□□□□□ -0.6
CLN6-203ENST00000563917 TRERF1Q96PN7 1200 aa11.28□□□□□ -0.6
CLN6-203ENST00000563917 PDLIM7Q9NR12 457 aa11.28□□□□□ -0.6
CLN6-203ENST00000563917 RNF146Q9NTX7 359 aa11.28□□□□□ -0.6
CLN6-203ENST00000563917 ANAPC4Q9UJX5 808 aa11.28□□□□□ -0.6
CLN6-203ENST00000563917 PNMA2Q9UL42 364 aa11.28□□□□□ -0.6
CLN6-203ENST00000563917 SMCHD1A6NHR9 2005 aa11.27□□□□□ -0.61
CLN6-203ENST00000563917 TLR3O15455 904 aaKnown RBP11.27□□□□□ -0.61
CLN6-203ENST00000563917 ORC4O43929 436 aa11.27□□□□□ -0.61
CLN6-203ENST00000563917 ZEB2O60315 1214 aa11.27□□□□□ -0.61
CLN6-203ENST00000563917 ADAMTS4O75173 837 aa11.27□□□□□ -0.61
CLN6-203ENST00000563917 KCNA10Q16322 511 aa11.27□□□□□ -0.61
CLN6-203ENST00000563917 CCDC144BQ3MJ40 725 aa11.27□□□□□ -0.61
CLN6-203ENST00000563917 GNASQ5JWF2 1037 aa11.27□□□□□ -0.61
CLN6-203ENST00000563917 CCDC174Q6PII3 467 aa11.27□□□□□ -0.61
CLN6-203ENST00000563917 CCDC144CPQ8IYA2 1237 aa11.27□□□□□ -0.61
CLN6-203ENST00000563917 AGBL1Q96MI9 1066 aa11.27□□□□□ -0.61
CLN6-203ENST00000563917 TOX2Q96NM4 488 aa11.27□□□□□ -0.61
CLN6-203ENST00000563917 MPHOSPH6Q99547 160 aaKnown RBP11.27□□□□□ -0.61
CLN6-203ENST00000563917 LNPKQ9C0E8 428 aa11.27□□□□□ -0.61
CLN6-203ENST00000563917 AP5M1Q9H0R1 490 aa11.27□□□□□ -0.61
CLN6-203ENST00000563917 RNF41Q9H4P4 317 aaPredicted RBP11.27□□□□□ -0.61
CLN6-203ENST00000563917 MTMR10Q9NXD2 777 aa11.27□□□□□ -0.61
CLN6-203ENST00000563917 CCPG1Q9ULG6 757 aa11.27□□□□□ -0.61
CLN6-203ENST00000563917 STXBP5LQ9Y2K9 1186 aa11.27□□□□□ -0.61
CLN6-203ENST00000563917 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.27□□□□□ -0.617e-6■■■■■ 33.6
CLN6-203ENST00000563917 ELP1O95163 1332 aa11.27□□□□□ -0.61
CLN6-203ENST00000563917 SYNRGQ9UMZ2 1314 aa11.27□□□□□ -0.61
CLN6-203ENST00000563917 FGAP02671 866 aa11.26□□□□□ -0.61
CLN6-203ENST00000563917 TOP1P11387 765 aaKnown RBP11.26□□□□□ -0.61
CLN6-203ENST00000563917 PCP11498 1178 aaKnown RBP11.26□□□□□ -0.61
CLN6-203ENST00000563917 TNFAIP2Q03169 654 aa11.26□□□□□ -0.61
CLN6-203ENST00000563917 FPGSQ05932 587 aa11.26□□□□□ -0.61
CLN6-203ENST00000563917 FAM109BQ6ICB4 259 aaPredicted RBP11.26□□□□□ -0.61
CLN6-203ENST00000563917 B4GALNT3Q6L9W6 998 aa11.26□□□□□ -0.61
CLN6-203ENST00000563917 NSMFQ6X4W1 530 aa11.26□□□□□ -0.61
CLN6-203ENST00000563917 MFSD6Q6ZSS7 791 aa11.26□□□□□ -0.61
CLN6-203ENST00000563917 LENG1Q96BZ8 264 aaPredicted RBP11.26□□□□□ -0.61
CLN6-203ENST00000563917 ADD3Q9UEY8 706 aaKnown RBP11.26□□□□□ -0.61
CLN6-203ENST00000563917 PRR12Q9ULL5 1215 aa11.26□□□□□ -0.61
CLN6-203ENST00000563917 SALL3Q9BXA9 1300 aa11.26□□□□□ -0.61
CLN6-203ENST00000563917 RANBP2P49792 3224 aaKnown RBP11.25□□□□□ -0.61
CLN6-203ENST00000563917 A0A0U1RQG5 324 aaPredicted RBP11.25□□□□□ -0.61
CLN6-203ENST00000563917 TRIM43BA6NCK2 446 aa11.25□□□□□ -0.61
CLN6-203ENST00000563917 B4DLN1 442 aa11.25□□□□□ -0.61
CLN6-203ENST00000563917 HIP1O00291 1037 aa11.25□□□□□ -0.61
CLN6-203ENST00000563917 KIAA0355O15063 1070 aa11.25□□□□□ -0.61
CLN6-203ENST00000563917 NMT2O60551 498 aa11.25□□□□□ -0.61
CLN6-203ENST00000563917 ASGR1P07306 291 aa11.25□□□□□ -0.61
CLN6-203ENST00000563917 HSPD1P10809 573 aaKnown RBP11.25□□□□□ -0.61
CLN6-203ENST00000563917 CST5P28325 142 aaPredicted RBP11.25□□□□□ -0.61
CLN6-203ENST00000563917 MRPL12P52815 198 aaKnown RBP11.25□□□□□ -0.61
CLN6-203ENST00000563917 GJA9P57773 515 aa11.25□□□□□ -0.61
CLN6-203ENST00000563917 CNTN2Q02246 1040 aa11.25□□□□□ -0.61
CLN6-203ENST00000563917 NMIQ13287 307 aaPredicted RBP11.25□□□□□ -0.61
CLN6-203ENST00000563917 SHHQ15465 462 aa11.25□□□□□ -0.61
CLN6-203ENST00000563917 VPS53Q5VIR6 699 aa11.25□□□□□ -0.61
CLN6-203ENST00000563917 ANKRD33Q7Z3H0 272 aa11.25□□□□□ -0.61
CLN6-203ENST00000563917 SH3RF1Q7Z6J0 888 aa11.25□□□□□ -0.61
CLN6-203ENST00000563917 FAM133AQ8N9E0 248 aa11.25□□□□□ -0.61
CLN6-203ENST00000563917 KLHDC9Q8NEP7 349 aa11.25□□□□□ -0.61
CLN6-203ENST00000563917 TRIM43Q96BQ3 446 aaPredicted RBP11.25□□□□□ -0.61
CLN6-203ENST00000563917 RNPC3Q96LT9 517 aaKnown RBP11.25□□□□□ -0.61
CLN6-203ENST00000563917 FAM227BQ96M60 508 aa11.25□□□□□ -0.61
CLN6-203ENST00000563917 A1CFQ9NQ94 594 aaKnown RBP11.25□□□□□ -0.61
CLN6-203ENST00000563917 IL17RBQ9NRM6 502 aa11.25□□□□□ -0.61
CLN6-203ENST00000563917 DIAPH3Q9NSV4 1193 aa11.25□□□□□ -0.61
CLN6-203ENST00000563917 ZMYM6O95789 1325 aa11.25□□□□□ -0.61
CLN6-203ENST00000563917 CCDC171Q6TFL3 1326 aa11.25□□□□□ -0.61
CLN6-203ENST00000563917 A0A0D9SFI3 127 aa11.24□□□□□ -0.61
CLN6-203ENST00000563917 CABYRO75952 493 aa11.24□□□□□ -0.61
CLN6-203ENST00000563917 ICAM1P05362 532 aa11.24□□□□□ -0.61
CLN6-203ENST00000563917 NT5C2P49902 561 aa11.24□□□□□ -0.61
CLN6-203ENST00000563917 HAND2P61296 217 aa11.24□□□□□ -0.61
CLN6-203ENST00000563917 SMAD3P84022 425 aaKnown RBP11.24□□□□□ -0.61
CLN6-203ENST00000563917 CCDC178Q5BJE1 867 aa11.24□□□□□ -0.61
CLN6-203ENST00000563917 SYDE2Q5VT97 1194 aa11.24□□□□□ -0.61
CLN6-203ENST00000563917 ESR2Q92731 530 aa11.24□□□□□ -0.61
CLN6-203ENST00000563917 FAM161BQ96MY7 647 aa11.24□□□□□ -0.61
CLN6-203ENST00000563917 TTC14Q96N46 770 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms