RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 TANGO6Q9C0B7 1094 aa25.17■■□□□ 1.62
LINC01960-201ENST00000563759 GOLGA6L4A6NEF3 574 aa25.16■■□□□ 1.62
LINC01960-201ENST00000563759 FAM205CA6NFA0 338 aa25.16■■□□□ 1.62
LINC01960-201ENST00000563759 PLA2G6O60733 806 aa25.16■■□□□ 1.62
LINC01960-201ENST00000563759 YEATS4O95619 227 aa25.16■■□□□ 1.62
LINC01960-201ENST00000563759 VCAM1P19320 739 aa25.16■■□□□ 1.62
LINC01960-201ENST00000563759 SNAP25P60880 206 aa25.16■■□□□ 1.62
LINC01960-201ENST00000563759 BICD2Q8TD16 824 aa25.16■■□□□ 1.62
LINC01960-201ENST00000563759 EMILIN3Q9NT22 766 aa25.16■■□□□ 1.62
LINC01960-201ENST00000563759 NOL7Q9UMY1 257 aaKnown RBP25.16■■□□□ 1.62
LINC01960-201ENST00000563759 NASPP49321 788 aaPredicted RBP25.15■■□□□ 1.62
LINC01960-201ENST00000563759 ADCY7P51828 1080 aa25.15■■□□□ 1.62
LINC01960-201ENST00000563759 SF3A1Q15459 793 aaKnown RBP25.15■■□□□ 1.62
LINC01960-201ENST00000563759 PIK3AP1Q6ZUJ8 805 aa25.15■■□□□ 1.62
LINC01960-201ENST00000563759 ANKRD13AQ8IZ07 590 aa25.15■■□□□ 1.62
LINC01960-201ENST00000563759 GPT2Q8TD30 523 aa25.15■■□□□ 1.62
LINC01960-201ENST00000563759 ZNF526Q8TF50 670 aaPredicted RBP25.15■■□□□ 1.62
LINC01960-201ENST00000563759 AMNQ9BXJ7 453 aa25.15■■□□□ 1.62
LINC01960-201ENST00000563759 PCDHA1Q9Y5I3 950 aa25.15■■□□□ 1.62
LINC01960-201ENST00000563759 C19orf81C9J6K1 198 aa25.15■■□□□ 1.62
LINC01960-201ENST00000563759 HMGCS2P54868 508 aa25.15■■□□□ 1.62
LINC01960-201ENST00000563759 EARS2Q5JPH6 523 aaKnown RBP25.15■■□□□ 1.62
LINC01960-201ENST00000563759 FBXO11Q86XK2 927 aa25.15■■□□□ 1.62
LINC01960-201ENST00000563759 RASGRP4Q8TDF6 673 aa25.15■■□□□ 1.62
LINC01960-201ENST00000563759 FBXO28Q9NVF7 368 aa25.15■■□□□ 1.62
LINC01960-201ENST00000563759 RCOR1Q9UKL0 485 aa25.15■■□□□ 1.62
LINC01960-201ENST00000563759 CCDC194A0A1B0GVG4 234 aa25.14■■□□□ 1.61
LINC01960-201ENST00000563759 ADAMTS3O15072 1205 aa25.14■■□□□ 1.61
LINC01960-201ENST00000563759 MOB2Q70IA6 237 aa25.14■■□□□ 1.61
LINC01960-201ENST00000563759 ARMC9Q7Z3E5 817 aa25.14■■□□□ 1.61
LINC01960-201ENST00000563759 LDHDQ86WU2 507 aa25.14■■□□□ 1.61
LINC01960-201ENST00000563759 REXO1Q8N1G1 1221 aaKnown RBP25.14■■□□□ 1.61
LINC01960-201ENST00000563759 LINC00301Q8NCQ3 95 aa25.14■■□□□ 1.61
LINC01960-201ENST00000563759 KCNG4Q8TDN1 519 aa25.14■■□□□ 1.61
LINC01960-201ENST00000563759 ZNF408Q9H9D4 720 aa25.14■■□□□ 1.61
LINC01960-201ENST00000563759 PCDHA6Q9UN73 950 aa25.14■■□□□ 1.61
LINC01960-201ENST00000563759 AFG3L2Q9Y4W6 797 aa25.14■■□□□ 1.61
LINC01960-201ENST00000563759 PCDHA8Q9Y5H6 950 aa25.14■■□□□ 1.61
LINC01960-201ENST00000563759 ATP2B1P20020 1258 aa25.13■■□□□ 1.61
LINC01960-201ENST00000563759 TOB1P50616 345 aaPredicted RBP25.13■■□□□ 1.61
LINC01960-201ENST00000563759 USH1GQ495M9 461 aa25.13■■□□□ 1.61
LINC01960-201ENST00000563759 NOM1Q5C9Z4 860 aaKnown RBP25.13■■□□□ 1.61
LINC01960-201ENST00000563759 RPAP3Q9H6T3 665 aaPredicted RBP25.13■■□□□ 1.61
LINC01960-201ENST00000563759 NMRK2Q9NPI5 230 aa25.13■■□□□ 1.61
LINC01960-201ENST00000563759 LOC285556D6RIA3 1793 aa25.13■■□□□ 1.61
LINC01960-201ENST00000563759 COL11A1P12107 1806 aaPredicted RBP25.13■■□□□ 1.61
LINC01960-201ENST00000563759 M0R2N6 131 aa25.13■■□□□ 1.61
LINC01960-201ENST00000563759 TRAF5O00463 557 aa25.13■■□□□ 1.61
LINC01960-201ENST00000563759 ME1P48163 572 aa25.13■■□□□ 1.61
LINC01960-201ENST00000563759 MAP3K11Q16584 847 aa25.13■■□□□ 1.61
LINC01960-201ENST00000563759 SLF1Q9BQI6 1058 aa25.13■■□□□ 1.61
LINC01960-201ENST00000563759 ELP3Q9H9T3 547 aa25.13■■□□□ 1.61
LINC01960-201ENST00000563759 TMOD4Q9NZQ9 345 aa25.13■■□□□ 1.61
LINC01960-201ENST00000563759 SPTLC2O15270 562 aa25.12■■□□□ 1.61
LINC01960-201ENST00000563759 CUL5Q93034 780 aa25.12■■□□□ 1.61
LINC01960-201ENST00000563759 C12orf42Q96LP6 360 aa25.12■■□□□ 1.61
LINC01960-201ENST00000563759 RANBP17Q9H2T7 1088 aaKnown RBP25.12■■□□□ 1.61
LINC01960-201ENST00000563759 RLFQ13129 1914 aa25.11■■□□□ 1.61
LINC01960-201ENST00000563759 FLOT1O75955 427 aa25.11■■□□□ 1.61
LINC01960-201ENST00000563759 CCDC174Q6PII3 467 aa25.11■■□□□ 1.61
LINC01960-201ENST00000563759 PRPF38AQ8NAV1 312 aaKnown RBP25.11■■□□□ 1.61
LINC01960-201ENST00000563759 RBM46Q8TBY0 533 aaKnown RBP25.11■■□□□ 1.61
LINC01960-201ENST00000563759 RIC8AQ9NPQ8 531 aa25.11■■□□□ 1.61
LINC01960-201ENST00000563759 MYH7BA7E2Y1 1941 aa25.11■■□□□ 1.61
LINC01960-201ENST00000563759 TRAF1Q13077 416 aa25.11■■□□□ 1.61
LINC01960-201ENST00000563759 KRT25Q7Z3Z0 450 aa25.11■■□□□ 1.61
LINC01960-201ENST00000563759 CLMNQ96JQ2 1002 aa25.11■■□□□ 1.61
LINC01960-201ENST00000563759 PCDHB6Q9Y5E3 794 aa25.11■■□□□ 1.61
LINC01960-201ENST00000563759 TRAPPC10P48553 1259 aa25.1■■□□□ 1.61
LINC01960-201ENST00000563759 SLC39A14Q15043 492 aa25.1■■□□□ 1.61
LINC01960-201ENST00000563759 CNKSR2Q8WXI2 1034 aa25.1■■□□□ 1.61
LINC01960-201ENST00000563759 OTUD5Q96G74 571 aa25.1■■□□□ 1.61
LINC01960-201ENST00000563759 PSTPIP2Q9H939 334 aa25.1■■□□□ 1.61
LINC01960-201ENST00000563759 BIN2Q9UBW5 565 aaPredicted RBP25.1■■□□□ 1.61
LINC01960-201ENST00000563759 CEP131Q9UPN4 1083 aa25.1■■□□□ 1.61
LINC01960-201ENST00000563759 RBBP6Q7Z6E9 1792 aaKnown RBP25.1■■□□□ 1.61
LINC01960-201ENST00000563759 TRPM7Q96QT4 1865 aa25.09■■□□□ 1.61
LINC01960-201ENST00000563759 MRPL12P52815 198 aaKnown RBP25.09■■□□□ 1.61
LINC01960-201ENST00000563759 TTC38Q5R3I4 469 aa25.09■■□□□ 1.61
LINC01960-201ENST00000563759 ERO1BQ86YB8 467 aa25.09■■□□□ 1.61
LINC01960-201ENST00000563759 JMYQ8N9B5 988 aa25.09■■□□□ 1.61
LINC01960-201ENST00000563759 PGBD1Q96JS3 809 aa25.09■■□□□ 1.61
LINC01960-201ENST00000563759 GLT8D2Q9H1C3 349 aa25.09■■□□□ 1.61
LINC01960-201ENST00000563759 PPATQ06203 517 aa25.09■■□□□ 1.61
LINC01960-201ENST00000563759 PTPAQ15257 358 aa25.09■■□□□ 1.61
LINC01960-201ENST00000563759 JAKMIP3Q5VZ66 844 aa25.09■■□□□ 1.61
LINC01960-201ENST00000563759 CAVIN1Q6NZI2 390 aaKnown RBP25.09■■□□□ 1.61
LINC01960-201ENST00000563759 NONOQ15233 471 aaKnown RBP eCLIP25.08■■□□□ 1.61
LINC01960-201ENST00000563759 GZF1Q9H116 711 aaPredicted RBP25.08■■□□□ 1.61
LINC01960-201ENST00000563759 PPP1R9AQ9ULJ8 1098 aa25.08■■□□□ 1.61
LINC01960-201ENST00000563759 SPDYE5A6NIY4 337 aa25.07■■□□□ 1.6
LINC01960-201ENST00000563759 MARCKSP29966 332 aaPredicted RBP25.07■■□□□ 1.6
LINC01960-201ENST00000563759 FMR1Q06787 632 aaKnown RBP eCLIP25.07■■□□□ 1.6
LINC01960-201ENST00000563759 UBE2SQ16763 222 aa25.07■■□□□ 1.6
LINC01960-201ENST00000563759 PCDHA7Q9UN72 937 aa25.07■■□□□ 1.6
LINC01960-201ENST00000563759 TAL1P17542 331 aaPredicted RBP25.06■■□□□ 1.6
LINC01960-201ENST00000563759 INF2Q27J81 1249 aa25.06■■□□□ 1.6
LINC01960-201ENST00000563759 SH3D19Q5HYK7 790 aa25.06■■□□□ 1.6
LINC01960-201ENST00000563759 TMEM260Q9NX78 707 aa25.06■■□□□ 1.6
LINC01960-201ENST00000563759 PPP6R2O75170 966 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms