RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 B4GALNT3Q6L9W6 998 aa8.2□□□□□ -1.1
CDH11-208ENST00000563492 GPR153Q6NV75 609 aa8.2□□□□□ -1.1
CDH11-208ENST00000563492 ARMCX2Q7L311 632 aa8.2□□□□□ -1.1
CDH11-208ENST00000563492 RNF180Q86T96 592 aa8.2□□□□□ -1.1
CDH11-208ENST00000563492 ZNF589Q86UQ0 364 aaPredicted RBP8.2□□□□□ -1.1
CDH11-208ENST00000563492 CCDC144CPQ8IYA2 1237 aa8.2□□□□□ -1.1
CDH11-208ENST00000563492 STAG1Q8WVM7 1258 aa8.2□□□□□ -1.1
CDH11-208ENST00000563492 LNPKQ9C0E8 428 aa8.2□□□□□ -1.1
CDH11-208ENST00000563492 KATNBL1Q9H079 304 aa8.2□□□□□ -1.1
CDH11-208ENST00000563492 A1CFQ9NQ94 594 aaKnown RBP8.2□□□□□ -1.1
CDH11-208ENST00000563492 FAM184BQ9ULE4 1060 aa8.2□□□□□ -1.1
CDH11-208ENST00000563492 PRR12Q9ULL5 1215 aa8.2□□□□□ -1.1
CDH11-208ENST00000563492 STX8Q9UNK0 236 aa8.2□□□□□ -1.1
CDH11-208ENST00000563492 CTDP1Q9Y5B0 961 aaPredicted RBP8.2□□□□□ -1.1
CDH11-208ENST00000563492 ZNF236Q9UL36 1845 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 SMCHD1A6NHR9 2005 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 TSPY2A6NKD2 308 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 DLL1O00548 723 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 IGHDP01880 384 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 SLC3A2P08195 630 aaKnown RBP8.19□□□□□ -1.1
CDH11-208ENST00000563492 ALAS1P13196 640 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 COPB2P35606 906 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 SLC1A4P43007 532 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 HAND2P61296 217 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 BEX3Q00994 111 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 IKQ13123 557 aaPredicted RBP8.19□□□□□ -1.1
CDH11-208ENST00000563492 HDAC1Q13547 482 aaPredicted RBP8.19□□□□□ -1.1
CDH11-208ENST00000563492 LRRFIP1Q32MZ4 808 aaKnown RBP8.19□□□□□ -1.1
CDH11-208ENST00000563492 RRP12Q5JTH9 1297 aaKnown RBP8.19□□□□□ -1.1
CDH11-208ENST00000563492 C1orf53Q5VUE5 145 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 RCSD1Q6JBY9 416 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 EEPD1Q7L9B9 569 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 FAM133AQ8N9E0 248 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 CHST13Q8NET6 341 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 EVI5LQ96CN4 794 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 GMCL1Q96IK5 515 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 TRERF1Q96PN7 1200 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 ZNF287Q9HBT7 754 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 GPCPD1Q9NPB8 672 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 STARD7Q9NQZ5 370 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 PDGFCQ9NRA1 345 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 TOMM22Q9NS69 142 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 RNF146Q9NTX7 359 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 TMEM39AQ9NV64 488 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 STXBP5LQ9Y2K9 1186 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 SYNGAP1Q96PV0 1343 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 PLIN4Q96Q06 1357 aa8.19□□□□□ -1.1
CDH11-208ENST00000563492 GREB1LQ9C091 1923 aaPredicted RBP8.19□□□□□ -1.1
CDH11-208ENST00000563492 KIAA0355O15063 1070 aa8.18□□□□□ -1.1
CDH11-208ENST00000563492 DUSP11O75319 330 aaKnown RBP8.18□□□□□ -1.1
CDH11-208ENST00000563492 ASGR1P07306 291 aa8.18□□□□□ -1.1
CDH11-208ENST00000563492 CLTBP09497 229 aa8.18□□□□□ -1.1
CDH11-208ENST00000563492 FGRP09769 529 aa8.18□□□□□ -1.1
CDH11-208ENST00000563492 C6orf222P0C671 652 aaPredicted RBP8.18□□□□□ -1.1
CDH11-208ENST00000563492 HSPD1P10809 573 aaKnown RBP8.18□□□□□ -1.1
CDH11-208ENST00000563492 RAG1P15918 1043 aa8.18□□□□□ -1.1
CDH11-208ENST00000563492 NOVP48745 357 aa8.18□□□□□ -1.1
CDH11-208ENST00000563492 STAT2P52630 851 aa8.18□□□□□ -1.1
CDH11-208ENST00000563492 OAZ1P54368 228 aa8.18□□□□□ -1.1
CDH11-208ENST00000563492 ALX1Q15699 326 aa8.18□□□□□ -1.1
CDH11-208ENST00000563492 GNASQ5JWF2 1037 aa8.18□□□□□ -1.1
CDH11-208ENST00000563492 FAM109BQ6ICB4 259 aaPredicted RBP8.18□□□□□ -1.1
CDH11-208ENST00000563492 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.18□□□□□ -1.1
CDH11-208ENST00000563492 C16orf59Q7L2K0 433 aa8.18□□□□□ -1.1
CDH11-208ENST00000563492 ZNF467Q7Z7K2 595 aaPredicted RBP8.18□□□□□ -1.1
CDH11-208ENST00000563492 TBC1D10CQ8IV04 446 aa8.18□□□□□ -1.1
CDH11-208ENST00000563492 MSL3Q8N5Y2 521 aaKnown RBP8.18□□□□□ -1.1
CDH11-208ENST00000563492 CHURC1Q8WUH1 139 aa8.18□□□□□ -1.1
CDH11-208ENST00000563492 TMEM47Q9BQJ4 181 aa8.18□□□□□ -1.1
CDH11-208ENST00000563492 TTYH1Q9H313 450 aaPredicted RBP8.18□□□□□ -1.1
CDH11-208ENST00000563492 CPVLQ9H3G5 476 aa8.18□□□□□ -1.1
CDH11-208ENST00000563492 ABHD16BQ9H3Z7 469 aa8.18□□□□□ -1.1
CDH11-208ENST00000563492 ACAD9Q9H845 621 aa8.18□□□□□ -1.1
CDH11-208ENST00000563492 HELLSQ9NRZ9 838 aa8.18□□□□□ -1.1
CDH11-208ENST00000563492 ANAPC4Q9UJX5 808 aa8.18□□□□□ -1.1
CDH11-208ENST00000563492 SYNPO2Q9UMS6 1093 aa8.18□□□□□ -1.1
CDH11-208ENST00000563492 FRMPD2Q68DX3 1309 aaPredicted RBP8.18□□□□□ -1.1
CDH11-208ENST00000563492 COL11A1P12107 1806 aaPredicted RBP8.17□□□□□ -1.1
CDH11-208ENST00000563492 PARP14Q460N5 1801 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 NFIBO00712 420 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 ORC4O43929 436 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 SMPD1P17405 629 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 CDK7P50613 346 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 GJA9P57773 515 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 BAATQ14032 418 aaPredicted RBP8.17□□□□□ -1.1
CDH11-208ENST00000563492 CCDC96Q2M329 555 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 MCMDC2Q4G0Z9 681 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 CXCL17Q6UXB2 119 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 NSMFQ6X4W1 530 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 NOL8Q76FK4 1167 aaKnown RBP8.17□□□□□ -1.1
CDH11-208ENST00000563492 ANKRD33Q7Z3H0 272 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 FAM160B2Q86V87 743 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 FBXO16Q8IX29 292 aaPredicted RBP8.17□□□□□ -1.1
CDH11-208ENST00000563492 EXOC6Q8TAG9 804 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 PPP1R13LQ8WUF5 828 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 RILPL2Q969X0 211 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 VTI1AQ96AJ9 217 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 CDX2Q99626 313 aaPredicted RBP8.17□□□□□ -1.1
CDH11-208ENST00000563492 ZKSCAN3Q9BRR0 538 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 TSEN34Q9BSV6 310 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms