RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 PKN1Q16512 942 aa17.06■□□□□ 0.32
CDH11-207ENST00000563255 FASTKD5Q7L8L6 764 aaKnown RBP17.06■□□□□ 0.32
CDH11-207ENST00000563255 ADGRF4Q8IZF3 695 aa17.06■□□□□ 0.32
CDH11-207ENST00000563255 RRP36Q96EU6 259 aaKnown RBP17.06■□□□□ 0.32
CDH11-207ENST00000563255 CPVLQ9H3G5 476 aa17.06■□□□□ 0.32
CDH11-207ENST00000563255 RPAP3Q9H6T3 665 aaPredicted RBP17.06■□□□□ 0.32
CDH11-207ENST00000563255 JMJD4Q9H9V9 463 aa17.06■□□□□ 0.32
CDH11-207ENST00000563255 EFCC1Q9HA90 598 aa17.06■□□□□ 0.32
CDH11-207ENST00000563255 A0A0G2JMZ2 1700 aa17.06■□□□□ 0.32
CDH11-207ENST00000563255 DTNBO60941 627 aa17.05■□□□□ 0.32
CDH11-207ENST00000563255 PPFIA3O75145 1194 aa17.05■□□□□ 0.32
CDH11-207ENST00000563255 SLC16A2P36021 539 aa17.05■□□□□ 0.32
CDH11-207ENST00000563255 GTF2A2P52657 109 aa17.05■□□□□ 0.32
CDH11-207ENST00000563255 SNAPC2Q13487 334 aa17.05■□□□□ 0.32
CDH11-207ENST00000563255 PFKFB3Q16875 520 aaPredicted RBP17.05■□□□□ 0.32
CDH11-207ENST00000563255 SYDE2Q5VT97 1194 aa17.05■□□□□ 0.32
CDH11-207ENST00000563255 LARP1BQ659C4 914 aaKnown RBP17.05■□□□□ 0.32
CDH11-207ENST00000563255 CATSPERGQ6ZRH7 1159 aa17.05■□□□□ 0.32
CDH11-207ENST00000563255 PRPF38AQ8NAV1 312 aaKnown RBP17.05■□□□□ 0.32
CDH11-207ENST00000563255 MS4A4AQ96JQ5 239 aa17.05■□□□□ 0.32
CDH11-207ENST00000563255 PRR12Q9ULL5 1215 aa17.05■□□□□ 0.32
CDH11-207ENST00000563255 ISY1Q9ULR0 285 aaKnown RBP17.05■□□□□ 0.32
CDH11-207ENST00000563255 CIZ1Q9ULV3 898 aaPredicted RBP17.05■□□□□ 0.32
CDH11-207ENST00000563255 MYPNQ86TC9 1320 aa17.04■□□□□ 0.32
CDH11-207ENST00000563255 CCL15-CCL14A0A0B4J2E2 113 aa17.04■□□□□ 0.32
CDH11-207ENST00000563255 USP17L15C9J2P7 530 aa17.04■□□□□ 0.32
CDH11-207ENST00000563255 USP17L13C9JLJ4 530 aa17.04■□□□□ 0.32
CDH11-207ENST00000563255 USP17L11C9JVI0 530 aa17.04■□□□□ 0.32
CDH11-207ENST00000563255 USP17L18D6R9N7 530 aa17.04■□□□□ 0.32
CDH11-207ENST00000563255 USP17L22D6RA61 530 aa17.04■□□□□ 0.32
CDH11-207ENST00000563255 USP17L17D6RBQ6 530 aa17.04■□□□□ 0.32
CDH11-207ENST00000563255 USP17L19D6RCP7 530 aa17.04■□□□□ 0.32
CDH11-207ENST00000563255 USP17L20D6RJB6 530 aa17.04■□□□□ 0.32
CDH11-207ENST00000563255 hCG_1984214I3L0E3 225 aa17.04■□□□□ 0.32
CDH11-207ENST00000563255 FDX1P10109 184 aa17.04■□□□□ 0.32
CDH11-207ENST00000563255 SCG2P13521 617 aa17.04■□□□□ 0.32
CDH11-207ENST00000563255 HOXA7P31268 230 aaPredicted RBP17.04■□□□□ 0.32
CDH11-207ENST00000563255 USP17L24Q0WX57 530 aa17.04■□□□□ 0.32
CDH11-207ENST00000563255 IKQ13123 557 aaPredicted RBP17.04■□□□□ 0.32
CDH11-207ENST00000563255 CCL15Q16663 113 aa17.04■□□□□ 0.32
CDH11-207ENST00000563255 ZNF713Q8N859 430 aaPredicted RBP17.04■□□□□ 0.32
CDH11-207ENST00000563255 BRI3BPQ8WY22 251 aa17.04■□□□□ 0.32
CDH11-207ENST00000563255 ALG1Q9BT22 464 aa17.04■□□□□ 0.32
CDH11-207ENST00000563255 VAT1LQ9HCJ6 419 aa17.04■□□□□ 0.32
CDH11-207ENST00000563255 SEC63Q9UGP8 760 aaKnown RBP17.04■□□□□ 0.32
CDH11-207ENST00000563255 RBBP6Q7Z6E9 1792 aaKnown RBP17.04■□□□□ 0.32
CDH11-207ENST00000563255 PNMA6FA0A0J9YX94 578 aa17.03■□□□□ 0.32
CDH11-207ENST00000563255 ZBTB5O15062 677 aa17.03■□□□□ 0.32
CDH11-207ENST00000563255 CETPP11597 493 aa17.03■□□□□ 0.32
CDH11-207ENST00000563255 SYT1P21579 422 aa17.03■□□□□ 0.32
CDH11-207ENST00000563255 MOGSQ13724 837 aa17.03■□□□□ 0.32
CDH11-207ENST00000563255 TAF1CQ15572 869 aaPredicted RBP17.03■□□□□ 0.32
CDH11-207ENST00000563255 FAM177A1Q8N128 213 aaPredicted RBP17.03■□□□□ 0.32
CDH11-207ENST00000563255 PIGSQ96S52 555 aa17.03■□□□□ 0.32
CDH11-207ENST00000563255 SLF1Q9BQI6 1058 aa17.03■□□□□ 0.32
CDH11-207ENST00000563255 TANGO6Q9C0B7 1094 aa17.03■□□□□ 0.32
CDH11-207ENST00000563255 ZFYVE28Q9HCC9 887 aa17.03■□□□□ 0.32
CDH11-207ENST00000563255 AGTPBP1Q9UPW5 1226 aa17.03■□□□□ 0.32
CDH11-207ENST00000563255 BRCA2P51587 3418 aa17.02■□□□□ 0.32
CDH11-207ENST00000563255 TCHHQ07283 1943 aa17.02■□□□□ 0.32
CDH11-207ENST00000563255 FLOT1O75955 427 aa17.02■□□□□ 0.32
CDH11-207ENST00000563255 XBP1P17861 261 aa17.02■□□□□ 0.32
CDH11-207ENST00000563255 NUCB2P80303 420 aa17.02■□□□□ 0.32
CDH11-207ENST00000563255 PABPC4Q13310 644 aaKnown RBP eCLIP17.02■□□□□ 0.32
CDH11-207ENST00000563255 COG2Q14746 738 aa17.02■□□□□ 0.32
CDH11-207ENST00000563255 GADL1Q6ZQY3 521 aa17.02■□□□□ 0.32
CDH11-207ENST00000563255 HOMER1Q86YM7 354 aa17.02■□□□□ 0.32
CDH11-207ENST00000563255 C8orf76Q96K31 380 aa17.02■□□□□ 0.32
CDH11-207ENST00000563255 RANBP17Q9H2T7 1088 aaKnown RBP17.02■□□□□ 0.32
CDH11-207ENST00000563255 SH3GLB2Q9NR46 395 aa17.02■□□□□ 0.32
CDH11-207ENST00000563255 FBXO28Q9NVF7 368 aa17.02■□□□□ 0.32
CDH11-207ENST00000563255 PPP1R9AQ9ULJ8 1098 aa17.02■□□□□ 0.32
CDH11-207ENST00000563255 ADAMTS5Q9UNA0 930 aa17.02■□□□□ 0.32
CDH11-207ENST00000563255 hCG_1642624A0A1W2PR95 340 aa17.01■□□□□ 0.31
CDH11-207ENST00000563255 STX6O43752 255 aa17.01■□□□□ 0.31
CDH11-207ENST00000563255 DSG3P32926 999 aa17.01■□□□□ 0.31
CDH11-207ENST00000563255 CAP1Q01518 475 aa17.01■□□□□ 0.31
CDH11-207ENST00000563255 ARHGEF6Q15052 776 aa17.01■□□□□ 0.31
CDH11-207ENST00000563255 CDC37Q16543 378 aaPredicted RBP17.01■□□□□ 0.31
CDH11-207ENST00000563255 QRICH1Q2TAL8 776 aa17.01■□□□□ 0.31
CDH11-207ENST00000563255 HABP4Q5JVS0 413 aaKnown RBP17.01■□□□□ 0.31
CDH11-207ENST00000563255 TREML2Q5T2D2 321 aa17.01■□□□□ 0.31
CDH11-207ENST00000563255 FAM43AQ8N2R8 423 aa17.01■□□□□ 0.31
CDH11-207ENST00000563255 FBXO18Q8NFZ0 1043 aa17.01■□□□□ 0.31
CDH11-207ENST00000563255 KIFC2Q96AC6 838 aa17.01■□□□□ 0.31
CDH11-207ENST00000563255 AIFM3Q96NN9 605 aa17.01■□□□□ 0.31
CDH11-207ENST00000563255 HOXC10Q9NYD6 342 aa17.01■□□□□ 0.31
CDH11-207ENST00000563255 CHMP5Q9NZZ3 219 aa17.01■□□□□ 0.31
CDH11-207ENST00000563255 SLC45A1Q9Y2W3 748 aa17.01■□□□□ 0.31
CDH11-207ENST00000563255 TRAF1Q13077 416 aa17■□□□□ 0.31
CDH11-207ENST00000563255 TRIM29Q14134 588 aa17■□□□□ 0.31
CDH11-207ENST00000563255 GPAT2Q6NUI2 795 aa17■□□□□ 0.31
CDH11-207ENST00000563255 PIBF1Q8WXW3 757 aa17■□□□□ 0.31
CDH11-207ENST00000563255 ARMC5Q96C12 935 aa17■□□□□ 0.31
CDH11-207ENST00000563255 BARHL2Q9NY43 387 aa17■□□□□ 0.31
CDH11-207ENST00000563255 H3BQV1 296 aa16.99■□□□□ 0.31
CDH11-207ENST00000563255 EN2P19622 333 aaPredicted RBP16.99■□□□□ 0.31
CDH11-207ENST00000563255 KRT40Q6A162 431 aa16.99■□□□□ 0.31
CDH11-207ENST00000563255 WWC2Q6AWC2 1192 aa16.99■□□□□ 0.31
CDH11-207ENST00000563255 LBX2Q6XYB7 198 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms