RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 IKQ13123 557 aaPredicted RBP10□□□□□ -0.81
UBR1-204ENST00000563239 WTAPQ15007 396 aa10□□□□□ -0.81
UBR1-204ENST00000563239 GPATCH4Q5T3I0 446 aaKnown RBP10□□□□□ -0.81
UBR1-204ENST00000563239 MAP3K21Q5TCX8 1036 aa10□□□□□ -0.81
UBR1-204ENST00000563239 RNF20Q5VTR2 975 aa10□□□□□ -0.81
UBR1-204ENST00000563239 NBPF11Q86T75 865 aa10□□□□□ -0.81
UBR1-204ENST00000563239 POTEDQ86YR6 584 aa10□□□□□ -0.81
UBR1-204ENST00000563239 CCAR1Q8IX12 1150 aaKnown RBP10□□□□□ -0.81
UBR1-204ENST00000563239 NEK1Q96PY6 1258 aa10□□□□□ -0.81
UBR1-204ENST00000563239 APBA2Q99767 749 aa10□□□□□ -0.81
UBR1-204ENST00000563239 MTA3Q9BTC8 594 aa10□□□□□ -0.81
UBR1-204ENST00000563239 LRRC2Q9BYS8 371 aa10□□□□□ -0.81
UBR1-204ENST00000563239 DNAJC25-GNG10A0A024R161 153 aa9.99□□□□□ -0.81
UBR1-204ENST00000563239 POTEFA5A3E0 1075 aa9.99□□□□□ -0.81
UBR1-204ENST00000563239 SEC24BO95487 1268 aa9.99□□□□□ -0.81
UBR1-204ENST00000563239 MYCP01106 439 aaPredicted RBP9.99□□□□□ -0.81
UBR1-204ENST00000563239 ICAM1P05362 532 aa9.99□□□□□ -0.81
UBR1-204ENST00000563239 PARP1P09874 1014 aaKnown RBP9.99□□□□□ -0.81
UBR1-204ENST00000563239 FCER1AP12319 257 aa9.99□□□□□ -0.81
UBR1-204ENST00000563239 CCL5P13501 91 aa9.99□□□□□ -0.81
UBR1-204ENST00000563239 CPA1P15085 419 aa9.99□□□□□ -0.81
UBR1-204ENST00000563239 COPB2P35606 906 aa9.99□□□□□ -0.81
UBR1-204ENST00000563239 LIFRP42702 1097 aa9.99□□□□□ -0.81
UBR1-204ENST00000563239 GRM4Q14833 912 aa9.99□□□□□ -0.81
UBR1-204ENST00000563239 ZNF792Q3KQV3 632 aa9.99□□□□□ -0.81
UBR1-204ENST00000563239 ASPRV1Q53RT3 343 aa9.99□□□□□ -0.81
UBR1-204ENST00000563239 CCDC174Q6PII3 467 aa9.99□□□□□ -0.81
UBR1-204ENST00000563239 DHX32Q7L7V1 743 aaKnown RBP9.99□□□□□ -0.81
UBR1-204ENST00000563239 TMEM87BQ96K49 555 aa9.99□□□□□ -0.81
UBR1-204ENST00000563239 TCEANC2Q96MN5 208 aa9.99□□□□□ -0.81
UBR1-204ENST00000563239 MMP19Q99542 508 aa9.99□□□□□ -0.81
UBR1-204ENST00000563239 UNC93B1Q9H1C4 597 aa9.99□□□□□ -0.81
UBR1-204ENST00000563239 JMJD4Q9H9V9 463 aa9.99□□□□□ -0.81
UBR1-204ENST00000563239 CWC22Q9HCG8 908 aaKnown RBP9.99□□□□□ -0.81
UBR1-204ENST00000563239 IVNS1ABPQ9Y6Y0 642 aa9.99□□□□□ -0.81
UBR1-204ENST00000563239 MKI67P46013 3256 aaKnown RBP9.99□□□□□ -0.81
UBR1-204ENST00000563239 WDR19Q8NEZ3 1342 aa9.99□□□□□ -0.81
UBR1-204ENST00000563239 ERICH2A1L162 156 aa9.98□□□□□ -0.81
UBR1-204ENST00000563239 CYTH3O43739 400 aa9.98□□□□□ -0.81
UBR1-204ENST00000563239 HMGCRP04035 888 aa9.98□□□□□ -0.81
UBR1-204ENST00000563239 PGK2P07205 417 aa9.98□□□□□ -0.81
UBR1-204ENST00000563239 ZKSCAN1P17029 563 aaPredicted RBP9.98□□□□□ -0.81
UBR1-204ENST00000563239 SLC4A3P48751 1232 aa9.98□□□□□ -0.81
UBR1-204ENST00000563239 CACNB2Q08289 660 aaPredicted RBP9.98□□□□□ -0.81
UBR1-204ENST00000563239 KRT32Q14532 448 aa9.98□□□□□ -0.81
UBR1-204ENST00000563239 SART3Q15020 963 aaKnown RBP9.98□□□□□ -0.81
UBR1-204ENST00000563239 MUM1L1Q5H9M0 696 aa9.98□□□□□ -0.81
UBR1-204ENST00000563239 SGMS1Q86VZ5 419 aa9.98□□□□□ -0.81
UBR1-204ENST00000563239 ADGRF4Q8IZF3 695 aa9.98□□□□□ -0.81
UBR1-204ENST00000563239 ZNF654Q8IZM8 581 aa9.98□□□□□ -0.81
UBR1-204ENST00000563239 CHST13Q8NET6 341 aa9.98□□□□□ -0.81
UBR1-204ENST00000563239 CLEC4DQ8WXI8 215 aa9.98□□□□□ -0.81
UBR1-204ENST00000563239 MTMR8Q96EF0 704 aa9.98□□□□□ -0.81
UBR1-204ENST00000563239 FGD4Q96M96 766 aa9.98□□□□□ -0.81
UBR1-204ENST00000563239 MYL10Q9BUA6 226 aa9.98□□□□□ -0.81
UBR1-204ENST00000563239 RNF146Q9NTX7 359 aa9.98□□□□□ -0.81
UBR1-204ENST00000563239 SMCHD1A6NHR9 2005 aa9.98□□□□□ -0.81
UBR1-204ENST00000563239 RBBP6Q7Z6E9 1792 aaKnown RBP9.97□□□□□ -0.81
UBR1-204ENST00000563239 KLRF2D3W0D1 207 aa9.97□□□□□ -0.81
UBR1-204ENST00000563239 PPP1R11O60927 126 aaPredicted RBP9.97□□□□□ -0.81
UBR1-204ENST00000563239 ALAS1P13196 640 aa9.97□□□□□ -0.81
UBR1-204ENST00000563239 CYP2C19P33261 490 aa9.97□□□□□ -0.81
UBR1-204ENST00000563239 UBXN2AP68543 259 aa9.97□□□□□ -0.81
UBR1-204ENST00000563239 KCTD2Q14681 263 aa9.97□□□□□ -0.81
UBR1-204ENST00000563239 CDC37Q16543 378 aaPredicted RBP9.97□□□□□ -0.81
UBR1-204ENST00000563239 TKFCQ3LXA3 575 aa9.97□□□□□ -0.81
UBR1-204ENST00000563239 OLFML2BQ68BL8 750 aa9.97□□□□□ -0.81
UBR1-204ENST00000563239 CATIPQ7Z7H3 387 aa9.97□□□□□ -0.81
UBR1-204ENST00000563239 DPP9Q86TI2 863 aa9.97□□□□□ -0.81
UBR1-204ENST00000563239 TRMT44Q8IYL2 757 aaKnown RBP9.97□□□□□ -0.81
UBR1-204ENST00000563239 TMTC2Q8N394 836 aa9.97□□□□□ -0.81
UBR1-204ENST00000563239 TRPV1Q8NER1 839 aa9.97□□□□□ -0.81
UBR1-204ENST00000563239 SHISA4Q96DD7 197 aa9.97□□□□□ -0.81
UBR1-204ENST00000563239 MAML3Q96JK9 1138 aa9.97□□□□□ -0.81
UBR1-204ENST00000563239 JAKMIP1Q96N16 626 aaKnown RBP9.97□□□□□ -0.81
UBR1-204ENST00000563239 TRERF1Q96PN7 1200 aa9.97□□□□□ -0.81
UBR1-204ENST00000563239 MAP3K14Q99558 947 aa9.97□□□□□ -0.81
UBR1-204ENST00000563239 RIOX1Q9H6W3 641 aa9.97□□□□□ -0.81
UBR1-204ENST00000563239 A1CFQ9NQ94 594 aaKnown RBP9.97□□□□□ -0.81
UBR1-204ENST00000563239 PAK6Q9NQU5 681 aaPredicted RBP9.97□□□□□ -0.81
UBR1-204ENST00000563239 HOMER2Q9NSB8 354 aa9.97□□□□□ -0.81
UBR1-204ENST00000563239 BIN2Q9UBW5 565 aaPredicted RBP9.97□□□□□ -0.81
UBR1-204ENST00000563239 BRPF3Q9ULD4 1205 aa9.97□□□□□ -0.81
UBR1-204ENST00000563239 CCPG1Q9ULG6 757 aa9.97□□□□□ -0.81
UBR1-204ENST00000563239 CTDP1Q9Y5B0 961 aaPredicted RBP9.97□□□□□ -0.81
UBR1-204ENST00000563239 ZNFX1Q9P2E3 1918 aaKnown RBP9.96□□□□□ -0.81
UBR1-204ENST00000563239 NFIBO00712 420 aa9.96□□□□□ -0.82
UBR1-204ENST00000563239 DDAH1O94760 285 aa9.96□□□□□ -0.82
UBR1-204ENST00000563239 HMGB1P09429 215 aaKnown RBP9.96□□□□□ -0.82
UBR1-204ENST00000563239 PRKAR2AP13861 404 aaKnown RBP9.96□□□□□ -0.82
UBR1-204ENST00000563239 EN2P19622 333 aaPredicted RBP9.96□□□□□ -0.82
UBR1-204ENST00000563239 RXRAP19793 462 aa9.96□□□□□ -0.82
UBR1-204ENST00000563239 RPS6KB1P23443 525 aa9.96□□□□□ -0.82
UBR1-204ENST00000563239 CCND3P30281 292 aaPredicted RBP9.96□□□□□ -0.82
UBR1-204ENST00000563239 CNTN2Q02246 1040 aa9.96□□□□□ -0.82
UBR1-204ENST00000563239 QRICH1Q2TAL8 776 aa9.96□□□□□ -0.82
UBR1-204ENST00000563239 C8orf34Q49A92 452 aa9.96□□□□□ -0.82
UBR1-204ENST00000563239 RAB11FIP4Q86YS3 637 aa9.96□□□□□ -0.82
UBR1-204ENST00000563239 FBXL16Q8N461 479 aa9.96□□□□□ -0.82
UBR1-204ENST00000563239 FAM133AQ8N9E0 248 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms