RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	RAB30	Q15771	203 aa		10.07	□□□□□ -0.8
CKLF-208	ENST00000563092	ZNF365	Q70YC5	407 aa		10.07	□□□□□ -0.8
CKLF-208	ENST00000563092	TMEM57	Q8N5G2	664 aa		10.07	□□□□□ -0.8
CKLF-208	ENST00000563092	VWCE	Q96DN2	955 aa		10.07	□□□□□ -0.8
CKLF-208	ENST00000563092	DYNLL2	Q96FJ2	89 aa		10.07	□□□□□ -0.8
CKLF-208	ENST00000563092	FGD4	Q96M96	766 aa		10.07	□□□□□ -0.8
CKLF-208	ENST00000563092	KATNBL1	Q9H079	304 aa		10.07	□□□□□ -0.8
CKLF-208	ENST00000563092	CNPY2	Q9Y2B0	182 aa		10.07	□□□□□ -0.8
CKLF-208	ENST00000563092	COL11A1	P12107	1806 aa	Predicted RBP	10.07	□□□□□ -0.8
CKLF-208	ENST00000563092	PLXNA1	Q9UIW2	1896 aa		10.06	□□□□□ -0.8
CKLF-208	ENST00000563092	SMIM22	K7EJ46	135 aa		10.06	□□□□□ -0.8
CKLF-208	ENST00000563092	ARVCF	O00192	962 aa		10.06	□□□□□ -0.8
CKLF-208	ENST00000563092	ASGR1	P07306	291 aa		10.06	□□□□□ -0.8
CKLF-208	ENST00000563092	POU3F3	P20264	500 aa	Predicted RBP	10.06	□□□□□ -0.8
CKLF-208	ENST00000563092	TTF1	Q15361	905 aa	Predicted RBP	10.06	□□□□□ -0.8
CKLF-208	ENST00000563092	SLC9C2	Q5TAH2	1124 aa		10.06	□□□□□ -0.8
CKLF-208	ENST00000563092	C12orf60	Q5U649	245 aa		10.06	□□□□□ -0.8
CKLF-208	ENST00000563092	LCORL	Q8N3X6	602 aa		10.06	□□□□□ -0.8
CKLF-208	ENST00000563092	TMEM199	Q8N511	208 aa		10.06	□□□□□ -0.8
CKLF-208	ENST00000563092	PCSK9	Q8NBP7	692 aa	Known RBP	10.06	□□□□□ -0.8
CKLF-208	ENST00000563092	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	10.06	□□□□□ -0.8
CKLF-208	ENST00000563092	SDR42E1	Q8WUS8	393 aa		10.06	□□□□□ -0.8
CKLF-208	ENST00000563092	FAM122A	Q96E09	287 aa		10.06	□□□□□ -0.8
CKLF-208	ENST00000563092	GLT1D1	Q96MS3	346 aa		10.06	□□□□□ -0.8
CKLF-208	ENST00000563092	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.06	□□□□□ -0.8
CKLF-208	ENST00000563092	IL23A	Q9NPF7	189 aa		10.06	□□□□□ -0.8
CKLF-208	ENST00000563092	ATP8A2	Q9NTI2	1148 aa		10.06	□□□□□ -0.8
CKLF-208	ENST00000563092	YBX2	Q9Y2T7	364 aa	Known RBP	10.06	□□□□□ -0.8
CKLF-208	ENST00000563092	ZBED9	Q6R2W3	1325 aa		10.06	□□□□□ -0.8
CKLF-208	ENST00000563092	ZNF532	Q9HCE3	1301 aa		10.06	□□□□□ -0.8
CKLF-208	ENST00000563092		A0A0U1RQG5	324 aa	Predicted RBP	10.05	□□□□□ -0.8
CKLF-208	ENST00000563092	EEF2	P13639	858 aa	Known RBP	10.05	□□□□□ -0.8
CKLF-208	ENST00000563092	CDK8	P49336	464 aa		10.05	□□□□□ -0.8
CKLF-208	ENST00000563092	C16orf86	Q6ZW13	317 aa		10.05	□□□□□ -0.8
CKLF-208	ENST00000563092	CLUAP1	Q96AJ1	413 aa		10.05	□□□□□ -0.8
CKLF-208	ENST00000563092	C1QTNF1	Q9BXJ1	281 aa		10.05	□□□□□ -0.8
CKLF-208	ENST00000563092	TEX13B	Q9BXU2	312 aa		10.05	□□□□□ -0.8
CKLF-208	ENST00000563092	KANSL2	Q9H9L4	492 aa		10.05	□□□□□ -0.8
CKLF-208	ENST00000563092	RIPK3	Q9Y572	518 aa		10.05	□□□□□ -0.8
CKLF-208	ENST00000563092	GREB1L	Q9C091	1923 aa	Predicted RBP	10.05	□□□□□ -0.8
CKLF-208	ENST00000563092	RIOK3	O14730	519 aa	Known RBP	10.04	□□□□□ -0.8
CKLF-208	ENST00000563092	ACR	P10323	421 aa		10.04	□□□□□ -0.8
CKLF-208	ENST00000563092	ACVR2B	Q13705	512 aa		10.04	□□□□□ -0.8
CKLF-208	ENST00000563092	CCDC144B	Q3MJ40	725 aa		10.04	□□□□□ -0.8
CKLF-208	ENST00000563092	CCDC129	Q6ZRS4	1044 aa		10.04	□□□□□ -0.8
CKLF-208	ENST00000563092	PPM1E	Q8WY54	764 aa		10.04	□□□□□ -0.8
CKLF-208	ENST00000563092	RNF25	Q96BH1	459 aa	Predicted RBP	10.04	□□□□□ -0.8
CKLF-208	ENST00000563092	NKX2-4	Q9H2Z4	354 aa		10.04	□□□□□ -0.8
CKLF-208	ENST00000563092	ABHD16B	Q9H3Z7	469 aa		10.04	□□□□□ -0.8
CKLF-208	ENST00000563092	C1orf115	Q9H7X2	142 aa		10.04	□□□□□ -0.8
CKLF-208	ENST00000563092	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.04	□□□□□ -0.8
CKLF-208	ENST00000563092	MSRA	Q9UJ68	235 aa		10.04	□□□□□ -0.8
CKLF-208	ENST00000563092	GRIN2D	O15399	1336 aa		10.04	□□□□□ -0.8
CKLF-208	ENST00000563092	ERC2	O15083	957 aa		10.03	□□□□□ -0.8
CKLF-208	ENST00000563092	PRKAB2	O43741	272 aa		10.03	□□□□□ -0.8
CKLF-208	ENST00000563092	C6orf222	P0C671	652 aa	Predicted RBP	10.03	□□□□□ -0.8
CKLF-208	ENST00000563092	CYP2C18	P33260	490 aa		10.03	□□□□□ -0.8
CKLF-208	ENST00000563092	CCDC85B	Q15834	202 aa	Predicted RBP	10.03	□□□□□ -0.8
CKLF-208	ENST00000563092	FAM83B	Q5T0W9	1011 aa		10.03	□□□□□ -0.8
CKLF-208	ENST00000563092	CEP85	Q6P2H3	762 aa		10.03	□□□□□ -0.8
CKLF-208	ENST00000563092	TMEM92	Q6UXU6	159 aa		10.03	□□□□□ -0.8
CKLF-208	ENST00000563092	AACS	Q86V21	672 aa		10.03	□□□□□ -0.8
CKLF-208	ENST00000563092	FRAT1	Q92837	279 aa	Predicted RBP	10.03	□□□□□ -0.8
CKLF-208	ENST00000563092	NECAB3	Q96P71	396 aa	Predicted RBP	10.03	□□□□□ -0.8
CKLF-208	ENST00000563092	SLF1	Q9BQI6	1058 aa		10.03	□□□□□ -0.8
CKLF-208	ENST00000563092	SEZ6L	Q9BYH1	1024 aa		10.03	□□□□□ -0.8
CKLF-208	ENST00000563092	ARMT1	Q9H993	441 aa		10.03	□□□□□ -0.8
CKLF-208	ENST00000563092	SLC28A3	Q9HAS3	691 aa		10.03	□□□□□ -0.8
CKLF-208	ENST00000563092	GOPC	Q9HD26	462 aa		10.03	□□□□□ -0.8
CKLF-208	ENST00000563092	ASTN1	O14525	1302 aa		10.03	□□□□□ -0.8
CKLF-208	ENST00000563092	CYP2D7	A0A087X1C5	515 aa		10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	USP17L12	C9JPN9	530 aa		10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	USP17L21	D6R901	530 aa		10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	TLR3	O15455	904 aa	Known RBP	10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	FGB	P02675	491 aa		10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	IGFBP4	P22692	258 aa		10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	ADD2	P35612	726 aa		10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	GNAS	Q5JWF2	1037 aa		10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	ZKSCAN2	Q63HK3	967 aa		10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	SNRNP48	Q6IEG0	339 aa	Known RBP	10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	ERC1	Q8IUD2	1116 aa		10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	PRPF38A	Q8NAV1	312 aa	Known RBP	10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	ZFP91	Q96JP5	570 aa	Predicted RBP	10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	NOC4L	Q9BVI4	516 aa	Known RBP	10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	PPP1R12C	Q9BZL4	782 aa		10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	WNT8A	Q9H1J5	351 aa		10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	MTIF3	Q9H2K0	278 aa	Known RBP	10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	SPC25	Q9HBM1	224 aa		10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	SLC38A10	Q9HBR0	1119 aa		10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	ZHX1	Q9UKY1	873 aa	Predicted RBP	10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	GNE	Q9Y223	722 aa	Known RBP	10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	PCDHA11	Q9Y5I1	949 aa		10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	UMODL1	Q5DID0	1318 aa		10.02	□□□□□ -0.81
CKLF-208	ENST00000563092	IGKV6D-41	A0A0C4DH26	115 aa		10.01	□□□□□ -0.81
CKLF-208	ENST00000563092	GOLIM4	O00461	696 aa		10.01	□□□□□ -0.81
CKLF-208	ENST00000563092	CABYR	O75952	493 aa		10.01	□□□□□ -0.81
CKLF-208	ENST00000563092	MBD4	O95243	580 aa		10.01	□□□□□ -0.81
CKLF-208	ENST00000563092	RLBP1	P12271	317 aa		10.01	□□□□□ -0.81
CKLF-208	ENST00000563092	OAZ1	P54368	228 aa		10.01	□□□□□ -0.81

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