RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 COPB2P35606 906 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 ISM2Q6H9L7 571 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 CLEC17AQ6ZS10 378 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 OTUD6AQ7L8S5 288 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 TEKT3Q9BXF9 490 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 SPZ1Q9BXG8 430 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 YY1AP1Q9H869 796 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 KIAA1468Q9P260 1216 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 TTC36A6NLP5 189 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 USP17L5A8MUK1 530 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 GH2P01242 217 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 SATB1Q01826 763 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 PAK1Q13153 545 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 SMIM5Q71RC9 77 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 LINC00301Q8NCQ3 95 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 TBC1D5Q92609 795 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 NYAP2Q9P242 653 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 STK17AQ9UEE5 414 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 FBXO40Q9UH90 709 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 DDX25Q9UHL0 483 aaKnown RBP8.43□□□□□ -1.06
TCF4-216ENST00000562680 FEM1BQ9UK73 627 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 PNMA3Q9UL41 463 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 CETN3O15182 167 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 MYCLP12524 364 aaPredicted RBP8.43□□□□□ -1.06
TCF4-216ENST00000562680 PTGDRQ13258 359 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 C16orf86Q6ZW13 317 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 ARMCX6Q7L4S7 300 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 PIGSQ96S52 555 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 IMPG2Q9BZV3 1241 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 AZI2Q9H6S1 392 aa8.43□□□□□ -1.06
TCF4-216ENST00000562680 GEMIN8Q9NWZ8 242 aaKnown RBP8.43□□□□□ -1.06
TCF4-216ENST00000562680 CALUO43852 315 aaPredicted RBP8.42□□□□□ -1.06
TCF4-216ENST00000562680 KRBA2Q6ZNG9 492 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 SLC17A8Q8NDX2 589 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 SEPT11Q9NVA2 429 aaKnown RBP8.42□□□□□ -1.06
TCF4-216ENST00000562680 DLG5Q8TDM6 1919 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 NOP56O00567 594 aaKnown RBP8.42□□□□□ -1.06
TCF4-216ENST00000562680 ZBTB5O15062 677 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 ONECUT3O60422 494 aaPredicted RBP8.42□□□□□ -1.06
TCF4-216ENST00000562680 ARHGEF16Q5VV41 709 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 PLA2G4DQ86XP0 818 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 CNGA4Q8IV77 575 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 CMTR1Q8N1G2 835 aaKnown RBP8.42□□□□□ -1.06
TCF4-216ENST00000562680 KIF2CQ99661 725 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 CEP83Q9Y592 693 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 ALS2Q96Q42 1657 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 A0A0G2JLW4 131 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 XRCC6P12956 609 aaKnown RBP eCLIP8.42□□□□□ -1.06
TCF4-216ENST00000562680 CDC37Q16543 378 aaPredicted RBP8.42□□□□□ -1.06
TCF4-216ENST00000562680 USP17L2Q6R6M4 530 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 MIER3Q7Z3K6 550 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 CD2APQ9Y5K6 639 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 SYNRGQ9UMZ2 1314 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 GADD45BO75293 160 aaPredicted RBP8.42□□□□□ -1.06
TCF4-216ENST00000562680 EPB41P11171 864 aaKnown RBP8.42□□□□□ -1.06
TCF4-216ENST00000562680 SEMA3FQ13275 785 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 PRKG1Q13976 671 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 STOX1Q6ZVD7 989 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 VGLL2Q8N8G2 317 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 GOLGA5Q8TBA6 731 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 CEP95Q96GE4 821 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 ALS2CR12Q96Q35 445 aa8.42□□□□□ -1.06
TCF4-216ENST00000562680 GNA14O95837 355 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 ABCD1P33897 745 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 SEPT2Q15019 361 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 KIF4BQ2VIQ3 1234 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 CDAN1Q8IWY9 1227 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 FAM163AQ96GL9 167 aaPredicted RBP8.41□□□□□ -1.06
TCF4-216ENST00000562680 GSDMAQ96QA5 445 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 RUFY1Q96T51 708 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 PRDM4Q9UKN5 801 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 ABCB11O95342 1321 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 ATRNO75882 1429 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 TM4SF1P30408 202 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 GABPB1Q06547 395 aaPredicted RBP8.41□□□□□ -1.06
TCF4-216ENST00000562680 ARHGEF6Q15052 776 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 GADL1Q6ZQY3 521 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 DEFB132Q7Z7B7 95 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 ZNF579Q8NAF0 562 aaKnown RBP8.41□□□□□ -1.06
TCF4-216ENST00000562680 PIK3R5Q8WYR1 880 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 RNF181Q9P0P0 153 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 FRMD4BQ9Y2L6 1034 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 SRPRBQ9Y5M8 271 aaKnown RBP8.41□□□□□ -1.06
TCF4-216ENST00000562680 RGPD1P0DJD0 1748 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 KIF1CO43896 1103 aaKnown RBP8.41□□□□□ -1.06
TCF4-216ENST00000562680 AKR1B10O60218 316 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 ERLIN1O75477 346 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 ERLIN2O94905 339 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 KCTD2Q14681 263 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 ANKRD35Q8N283 1001 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 LPAR1Q92633 364 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 ZDHHC15Q96MV8 337 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 NUP58Q9BVL2 599 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 DDR1Q08345 913 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 PKP1Q13835 747 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 SLFNL1Q499Z3 407 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 VWA3BQ502W6 1294 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 PRR16Q569H4 304 aa8.41□□□□□ -1.06
TCF4-216ENST00000562680 HERC4Q5GLZ8 1057 aaPredicted RBP8.41□□□□□ -1.06
TCF4-216ENST00000562680 CDC42EP5Q6NZY7 148 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms