RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 PGK1P00558 417 aa11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 IGHA2P01877 340 aa11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 PDHBP11177 359 aa11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 PTGS1P23219 599 aa11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 IRX5P78411 483 aaPredicted RBP11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 LRRC26Q2I0M4 334 aa11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 HABP4Q5JVS0 413 aaKnown RBP11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 PPP4R3BQ5MIZ7 849 aa11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 NSMFQ6X4W1 530 aa11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 CYB5R4Q7L1T6 521 aa11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 CHST3Q7LGC8 479 aa11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 FGD4Q96M96 766 aa11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 TCP11L1Q9NUJ3 509 aa11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 ZSWIM5Q9P217 1185 aa11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 CCPG1Q9ULG6 757 aa11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 SYNPO2Q9UMS6 1093 aa11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 NR2E3Q9Y5X4 410 aa11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 TRIOBPQ9H2D6 2365 aa11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 MCM3APO60318 1980 aa11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 SOWAHBA6NEL2 793 aa11.13□□□□□ -0.63
NSMCE1-203ENST00000562039 POTEB2H3BUK9 544 aa11.13□□□□□ -0.63
NSMCE1-203ENST00000562039 ATP2A1O14983 1001 aa11.13□□□□□ -0.63
NSMCE1-203ENST00000562039 SEPT4O43236 478 aa11.13□□□□□ -0.63
NSMCE1-203ENST00000562039 COPB2P35606 906 aa11.13□□□□□ -0.63
NSMCE1-203ENST00000562039 NOVP48745 357 aa11.13□□□□□ -0.63
NSMCE1-203ENST00000562039 ZNF543Q08ER8 600 aa11.13□□□□□ -0.63
NSMCE1-203ENST00000562039 EEPD1Q7L9B9 569 aa11.13□□□□□ -0.63
NSMCE1-203ENST00000562039 TICAM2Q86XR7 235 aa11.13□□□□□ -0.63
NSMCE1-203ENST00000562039 CHST13Q8NET6 341 aa11.13□□□□□ -0.63
NSMCE1-203ENST00000562039 ZSCAN10Q96SZ4 725 aaPredicted RBP11.13□□□□□ -0.63
NSMCE1-203ENST00000562039 ACAD9Q9H845 621 aa11.13□□□□□ -0.63
NSMCE1-203ENST00000562039 VAT1LQ9HCJ6 419 aa11.13□□□□□ -0.63
NSMCE1-203ENST00000562039 A1CFQ9NQ94 594 aaKnown RBP11.13□□□□□ -0.63
NSMCE1-203ENST00000562039 RBM27Q9P2N5 1060 aaKnown RBP11.13□□□□□ -0.63
NSMCE1-203ENST00000562039 CTNNA3Q9UI47 895 aa11.13□□□□□ -0.63
NSMCE1-203ENST00000562039 LAMA4Q16363 1823 aa11.13□□□□□ -0.63
NSMCE1-203ENST00000562039 TNKSO95271 1327 aa11.12□□□□□ -0.63
NSMCE1-203ENST00000562039 DNAJC25-GNG10A0A024R161 153 aa11.12□□□□□ -0.63
NSMCE1-203ENST00000562039 DHX16O60231 1041 aaKnown RBP11.12□□□□□ -0.63
NSMCE1-203ENST00000562039 CYP21A2P08686 494 aa11.12□□□□□ -0.63
NSMCE1-203ENST00000562039 ZNF865P0CJ78 1059 aaPredicted RBP11.12□□□□□ -0.63
NSMCE1-203ENST00000562039 COL6A1P12109 1028 aa11.12□□□□□ -0.63
NSMCE1-203ENST00000562039 ADCYAP1R1P41586 468 aa11.12□□□□□ -0.63
NSMCE1-203ENST00000562039 OAZ1P54368 228 aa11.12□□□□□ -0.63
NSMCE1-203ENST00000562039 USH1GQ495M9 461 aa11.12□□□□□ -0.63
NSMCE1-203ENST00000562039 IQCA1Q86XH1 822 aa11.12□□□□□ -0.63
NSMCE1-203ENST00000562039 ENAHQ8N8S7 591 aaPredicted RBP11.12□□□□□ -0.63
NSMCE1-203ENST00000562039 PNMA1Q8ND90 353 aa11.12□□□□□ -0.63
NSMCE1-203ENST00000562039 RUFY2Q8WXA3 655 aa11.12□□□□□ -0.63
NSMCE1-203ENST00000562039 UBAC1Q9BSL1 405 aa11.12□□□□□ -0.63
NSMCE1-203ENST00000562039 KAT14Q9H8E8 782 aa11.12□□□□□ -0.63
NSMCE1-203ENST00000562039 SENP2Q9HC62 589 aa11.12□□□□□ -0.63
NSMCE1-203ENST00000562039 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.12□□□□□ -0.63
NSMCE1-203ENST00000562039 FBXO40Q9UH90 709 aa11.12□□□□□ -0.63
NSMCE1-203ENST00000562039 CNPY2Q9Y2B0 182 aa11.12□□□□□ -0.63
NSMCE1-203ENST00000562039 MYADML2A6NDP7 307 aa11.11□□□□□ -0.63
NSMCE1-203ENST00000562039 KBTBD13C9JR72 458 aa11.11□□□□□ -0.63
NSMCE1-203ENST00000562039 NFIBO00712 420 aa11.11□□□□□ -0.63
NSMCE1-203ENST00000562039 SGSM2O43147 1006 aa11.11□□□□□ -0.63
NSMCE1-203ENST00000562039 ADCY6O43306 1168 aa11.11□□□□□ -0.63
NSMCE1-203ENST00000562039 MSCO60682 206 aa11.11□□□□□ -0.63
NSMCE1-203ENST00000562039 RARBP10826 455 aa11.11□□□□□ -0.63
NSMCE1-203ENST00000562039 PCP11498 1178 aaKnown RBP11.11□□□□□ -0.63
NSMCE1-203ENST00000562039 CALML3P27482 149 aa11.11□□□□□ -0.63
NSMCE1-203ENST00000562039 LRRC41Q15345 812 aa11.11□□□□□ -0.63
NSMCE1-203ENST00000562039 STOX1Q6ZVD7 989 aa11.11□□□□□ -0.63
NSMCE1-203ENST00000562039 ARMCX2Q7L311 632 aa11.11□□□□□ -0.63
NSMCE1-203ENST00000562039 CCDC144CPQ8IYA2 1237 aa11.11□□□□□ -0.63
NSMCE1-203ENST00000562039 TTC14Q96N46 770 aa11.11□□□□□ -0.63
NSMCE1-203ENST00000562039 KRT23Q9C075 422 aa11.11□□□□□ -0.63
NSMCE1-203ENST00000562039 RANBP17Q9H2T7 1088 aaKnown RBP11.11□□□□□ -0.63
NSMCE1-203ENST00000562039 XPNPEP3Q9NQH7 507 aa11.11□□□□□ -0.63
NSMCE1-203ENST00000562039 ATP11BQ9Y2G3 1177 aa11.11□□□□□ -0.63
NSMCE1-203ENST00000562039 DIS3Q9Y2L1 958 aaKnown RBP11.11□□□□□ -0.63
NSMCE1-203ENST00000562039 RBM8AQ9Y5S9 174 aaKnown RBP11.11□□□□□ -0.63
NSMCE1-203ENST00000562039 ASTN1O14525 1302 aa11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 RAD50Q92878 1312 aa11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 PTPDC1A2A3K4 754 aa11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 DNM1LO00429 736 aa11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 PLA2G6O60733 806 aa11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 ICAM1P05362 532 aa11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 FDX1P10109 184 aa11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 MDM2Q00987 491 aaPredicted RBP11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 ACVR2BQ13705 512 aa11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 BAATQ14032 418 aaPredicted RBP11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 TMEM63BQ5T3F8 832 aa11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 IFIT1BQ5T764 474 aaKnown RBP11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 BTNL9Q6UXG8 535 aa11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 SLC30A10Q6XR72 485 aa11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 NOL8Q76FK4 1167 aaKnown RBP11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 DGKHQ86XP1 1220 aa11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 ARRDC4Q8NCT1 418 aa11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 GPHNQ9NQX3 736 aaPredicted RBP11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 PDGFCQ9NRA1 345 aa11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 U3KPZ7 1027 aaPredicted RBP11.1□□□□□ -0.63
NSMCE1-203ENST00000562039 E7EWF7 191 aa11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 IFIT3O14879 490 aaKnown RBP11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 SNHG28P0DPA3 235 aa11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 AKR1A1P14550 325 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms