RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 C16orf45Q96MC5 204 aaPredicted RBP11.11□□□□□ -0.63
SMG1-205ENST00000561947 CCSER1Q9C0I3 900 aa11.11□□□□□ -0.63
SMG1-205ENST00000561947 BLZF1Q9H2G9 400 aa11.11□□□□□ -0.63
SMG1-205ENST00000561947 DHX36Q9H2U1 1008 aaKnown RBP11.11□□□□□ -0.63
SMG1-205ENST00000561947 DNAJC18Q9H819 358 aa11.11□□□□□ -0.63
SMG1-205ENST00000561947 STK32BQ9NY57 414 aa11.11□□□□□ -0.63
SMG1-205ENST00000561947 PPP1R3GB7ZBB8 358 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 NPM3O75607 178 aaKnown RBP11.1□□□□□ -0.63
SMG1-205ENST00000561947 OR52Z1P0C646 297 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 CDK11BP21127 795 aaKnown RBP11.1□□□□□ -0.63
SMG1-205ENST00000561947 CDC25AP30304 524 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 RBM5P52756 815 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMG1-205ENST00000561947 CACNB3P54284 484 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 ORC2Q13416 577 aaPredicted RBP11.1□□□□□ -0.63
SMG1-205ENST00000561947 EZH2Q15910 746 aaKnown RBP11.1□□□□□ -0.63
SMG1-205ENST00000561947 AOC3Q16853 763 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 LETM2Q2VYF4 491 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 HSP90AA4PQ58FG1 418 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 SPATA1Q5VX52 437 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 SAMSN1Q9NSI8 373 aaKnown RBP11.1□□□□□ -0.63
SMG1-205ENST00000561947 FAM198AQ9UFP1 575 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 SERPINA10Q9UK55 444 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 NRDCO43847 1150 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 CCNT1O60563 726 aaKnown RBP11.1□□□□□ -0.63
SMG1-205ENST00000561947 ADCY7P51828 1080 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 GPATCH4Q5T3I0 446 aaKnown RBP11.1□□□□□ -0.63
SMG1-205ENST00000561947 JAKMIP3Q5VZ66 844 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 CC2D2BQ6DHV5 1058 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 KLHL10Q6JEL2 608 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 PPP1R18Q6NYC8 613 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 SMYD4Q8IYR2 804 aaPredicted RBP11.1□□□□□ -0.63
SMG1-205ENST00000561947 TBCKQ8TEA7 893 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 COA7Q96BR5 231 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 AK8Q96MA6 479 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 CAMKK2Q96RR4 588 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 JMJD4Q9H9V9 463 aa11.1□□□□□ -0.63
SMG1-205ENST00000561947 BIN2Q9UBW5 565 aaPredicted RBP11.1□□□□□ -0.63
SMG1-205ENST00000561947 ARFGEF1Q9Y6D6 1849 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 PNMA6FA0A0J9YX94 578 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 DDTLA6NHG4 134 aaPredicted RBP11.09□□□□□ -0.63
SMG1-205ENST00000561947 USP27XA6NNY8 438 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 PP2D1A8MPX8 630 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 DYNC1I1O14576 645 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 TNNT1P13805 278 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 UBA7P41226 1012 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 KCNJ6P48051 423 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 TCP10Q12799 353 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 NAALADL2Q58DX5 795 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 ADGRF4Q8IZF3 695 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 CCAR2Q8N163 923 aaKnown RBP11.09□□□□□ -0.63
SMG1-205ENST00000561947 SUPT20HQ8NEM7 779 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 RMND1Q9NWS8 449 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 TMEM260Q9NX78 707 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 PI4KBQ9UBF8 816 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 RPN1P04843 607 aaKnown RBP11.09□□□□□ -0.63
SMG1-205ENST00000561947 SLURP2P0DP57 97 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 STX17P56962 302 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 ATP2B2Q01814 1243 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 EN1Q05925 392 aaPredicted RBP11.09□□□□□ -0.63
SMG1-205ENST00000561947 CCDC96Q2M329 555 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 RRAGBQ5VZM2 374 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 TTBK2Q6IQ55 1244 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 RASSF8Q8NHQ8 419 aa11.09□□□□□ -0.63
SMG1-205ENST00000561947 GTF2F1P35269 517 aaKnown RBP eCLIP11.08□□□□□ -0.64
SMG1-205ENST00000561947 ZNF658Q5TYW1 1059 aaPredicted RBP11.08□□□□□ -0.64
SMG1-205ENST00000561947 CDKAL1Q5VV42 579 aa11.08□□□□□ -0.64
SMG1-205ENST00000561947 SH3BP5LQ7L8J4 393 aa11.08□□□□□ -0.64
SMG1-205ENST00000561947 CTNND2Q9UQB3 1225 aa11.08□□□□□ -0.64
SMG1-205ENST00000561947 A0A1B0GTH6 734 aa11.08□□□□□ -0.64
SMG1-205ENST00000561947 FAM196BA6NMK8 535 aa11.08□□□□□ -0.64
SMG1-205ENST00000561947 MYL1P05976 194 aa11.08□□□□□ -0.64
SMG1-205ENST00000561947 TBX2Q13207 712 aaPredicted RBP11.08□□□□□ -0.64
SMG1-205ENST00000561947 CERKLQ49MI3 558 aaPredicted RBP11.08□□□□□ -0.64
SMG1-205ENST00000561947 NYAP1Q6ZVC0 841 aa11.08□□□□□ -0.64
SMG1-205ENST00000561947 CABP7Q86V35 215 aa11.08□□□□□ -0.64
SMG1-205ENST00000561947 ZSCAN29Q8IWY8 852 aaPredicted RBP11.08□□□□□ -0.64
SMG1-205ENST00000561947 CCDC112Q8NEF3 446 aa11.08□□□□□ -0.64
SMG1-205ENST00000561947 MKL1Q969V6 931 aa11.08□□□□□ -0.64
SMG1-205ENST00000561947 MTMR8Q96EF0 704 aa11.08□□□□□ -0.64
SMG1-205ENST00000561947 TRIM34Q9BYJ4 488 aa11.08□□□□□ -0.64
SMG1-205ENST00000561947 RIC8AQ9NPQ8 531 aa11.08□□□□□ -0.64
SMG1-205ENST00000561947 PPP1R11O60927 126 aaPredicted RBP11.07□□□□□ -0.64
SMG1-205ENST00000561947 NR1I3Q14994 352 aa11.07□□□□□ -0.64
SMG1-205ENST00000561947 PTPN21Q16825 1174 aa11.07□□□□□ -0.64
SMG1-205ENST00000561947 TATDN1Q6P1N9 297 aa11.07□□□□□ -0.64
SMG1-205ENST00000561947 KCTD1Q719H9 257 aa11.07□□□□□ -0.64
SMG1-205ENST00000561947 APTXQ7Z2E3 356 aaKnown RBP11.07□□□□□ -0.64
SMG1-205ENST00000561947 CUEDC2Q9H467 287 aa11.07□□□□□ -0.64
SMG1-205ENST00000561947 MAGEF1Q9HAY2 307 aa11.07□□□□□ -0.64
SMG1-205ENST00000561947 KBTBD4Q9NVX7 518 aa11.07□□□□□ -0.64
SMG1-205ENST00000561947 NYAP2Q9P242 653 aa11.07□□□□□ -0.64
SMG1-205ENST00000561947 PSDA5PKW4 1024 aaPredicted RBP11.07□□□□□ -0.64
SMG1-205ENST00000561947 USP17L10C9JJH3 530 aa11.07□□□□□ -0.64
SMG1-205ENST00000561947 RIOK3O14730 519 aaKnown RBP11.07□□□□□ -0.64
SMG1-205ENST00000561947 ZBTB5O15062 677 aa11.07□□□□□ -0.64
SMG1-205ENST00000561947 PPIP5K2O43314 1243 aa11.07□□□□□ -0.64
SMG1-205ENST00000561947 EEF2P13639 858 aaKnown RBP11.07□□□□□ -0.64
SMG1-205ENST00000561947 E4F1Q66K89 784 aaPredicted RBP11.07□□□□□ -0.64
SMG1-205ENST00000561947 SPECC1LQ69YQ0 1117 aa11.07□□□□□ -0.64
SMG1-205ENST00000561947 POTEDQ86YR6 584 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms