RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 SEPT4O43236 478 aa27.98■■■□□ 2.07
CDR2-202ENST00000561630 CYP21A2P08686 494 aa27.98■■■□□ 2.07
CDR2-202ENST00000561630 SNAP25P60880 206 aa27.98■■■□□ 2.07
CDR2-202ENST00000561630 PRAMEF19Q5SWL8 479 aa27.98■■■□□ 2.07
CDR2-202ENST00000561630 SYDE2Q5VT97 1194 aa27.98■■■□□ 2.07
CDR2-202ENST00000561630 CCDC174Q6PII3 467 aa27.98■■■□□ 2.07
CDR2-202ENST00000561630 MSL3Q8N5Y2 521 aaKnown RBP27.98■■■□□ 2.07
CDR2-202ENST00000561630 RANBP17Q9H2T7 1088 aaKnown RBP27.98■■■□□ 2.07
CDR2-202ENST00000561630 ACAD9Q9H845 621 aa27.98■■■□□ 2.07
CDR2-202ENST00000561630 GPCPD1Q9NPB8 672 aa27.98■■■□□ 2.07
CDR2-202ENST00000561630 SKAP1Q86WV1 359 aa27.97■■■□□ 2.07
CDR2-202ENST00000561630 ENAHQ8N8S7 591 aaPredicted RBP27.97■■■□□ 2.07
CDR2-202ENST00000561630 C11orf49Q9H6J7 331 aa27.97■■■□□ 2.07
CDR2-202ENST00000561630 RNF146Q9NTX7 359 aa27.97■■■□□ 2.07
CDR2-202ENST00000561630 H0YGN5 161 aa27.96■■■□□ 2.07
CDR2-202ENST00000561630 BMP2KLQ5H9B9 411 aa27.96■■■□□ 2.07
CDR2-202ENST00000561630 PNMA1Q8ND90 353 aa27.96■■■□□ 2.07
CDR2-202ENST00000561630 MAP4K1Q92918 833 aa27.96■■■□□ 2.07
CDR2-202ENST00000561630 TRERF1Q96PN7 1200 aa27.96■■■□□ 2.07
CDR2-202ENST00000561630 KAT14Q9H8E8 782 aa27.96■■■□□ 2.07
CDR2-202ENST00000561630 TNKSO95271 1327 aa27.95■■■□□ 2.07
CDR2-202ENST00000561630 ICAM1P05362 532 aa27.95■■■□□ 2.06
CDR2-202ENST00000561630 COL6A1P12109 1028 aa27.95■■■□□ 2.06
CDR2-202ENST00000561630 ALAS1P13196 640 aa27.95■■■□□ 2.06
CDR2-202ENST00000561630 GPATCH4Q5T3I0 446 aaKnown RBP27.95■■■□□ 2.06
CDR2-202ENST00000561630 MAMDC4Q6UXC1 1216 aa27.95■■■□□ 2.06
CDR2-202ENST00000561630 ZNF467Q7Z7K2 595 aaPredicted RBP27.95■■■□□ 2.06
CDR2-202ENST00000561630 UBAC1Q9BSL1 405 aa27.95■■■□□ 2.06
CDR2-202ENST00000561630 SYNGAP1Q96PV0 1343 aa27.94■■■□□ 2.06
CDR2-202ENST00000561630 TRDNQ13061 729 aa27.94■■■□□ 2.06
CDR2-202ENST00000561630 CCPG1Q9ULG6 757 aa27.94■■■□□ 2.06
CDR2-202ENST00000561630 NR2E3Q9Y5X4 410 aa27.94■■■□□ 2.06
CDR2-202ENST00000561630 EVI5O60447 810 aa27.93■■■□□ 2.06
CDR2-202ENST00000561630 CCDC136Q96JN2 1154 aa27.93■■■□□ 2.06
CDR2-202ENST00000561630 FGD4Q96M96 766 aa27.93■■■□□ 2.06
CDR2-202ENST00000561630 A1CFQ9NQ94 594 aaKnown RBP27.93■■■□□ 2.06
CDR2-202ENST00000561630 CNPY2Q9Y2B0 182 aa27.93■■■□□ 2.06
CDR2-202ENST00000561630 PFASO15067 1338 aa27.92■■■□□ 2.06
CDR2-202ENST00000561630 ZNF865P0CJ78 1059 aaPredicted RBP27.92■■■□□ 2.06
CDR2-202ENST00000561630 TAL1P17542 331 aaPredicted RBP27.92■■■□□ 2.06
CDR2-202ENST00000561630 CYB5R4Q7L1T6 521 aa27.92■■■□□ 2.06
CDR2-202ENST00000561630 TAF6LQ9Y6J9 622 aa27.92■■■□□ 2.06
CDR2-202ENST00000561630 ZNFX1Q9P2E3 1918 aaKnown RBP27.91■■■□□ 2.06
CDR2-202ENST00000561630 SNAI1O95863 264 aaPredicted RBP27.91■■■□□ 2.06
CDR2-202ENST00000561630 GOLGA8HP0CJ92 632 aa27.91■■■□□ 2.06
CDR2-202ENST00000561630 MUM1L1Q5H9M0 696 aa27.91■■■□□ 2.06
CDR2-202ENST00000561630 ANO1Q5XXA6 986 aa27.91■■■□□ 2.06
CDR2-202ENST00000561630 KIAA1211Q6ZU35 1233 aa27.91■■■□□ 2.06
CDR2-202ENST00000561630 FAM133AQ8N9E0 248 aa27.91■■■□□ 2.06
CDR2-202ENST00000561630 ESYT1Q9BSJ8 1104 aa27.91■■■□□ 2.06
CDR2-202ENST00000561630 PNMA2Q9UL42 364 aa27.91■■■□□ 2.06
CDR2-202ENST00000561630 RBM8AQ9Y5S9 174 aaKnown RBP27.91■■■□□ 2.06
CDR2-202ENST00000561630 E7EWF7 191 aa27.9■■■□□ 2.06
CDR2-202ENST00000561630 POTEB2H3BUK9 544 aa27.9■■■□□ 2.06
CDR2-202ENST00000561630 DNM1LO00429 736 aa27.9■■■□□ 2.06
CDR2-202ENST00000561630 CNTN2Q02246 1040 aa27.9■■■□□ 2.06
CDR2-202ENST00000561630 SEC23AQ15436 765 aa27.9■■■□□ 2.06
CDR2-202ENST00000561630 IFIT1BQ5T764 474 aaKnown RBP27.9■■■□□ 2.06
CDR2-202ENST00000561630 ARRDC4Q8NCT1 418 aa27.9■■■□□ 2.06
CDR2-202ENST00000561630 LSG1Q9H089 658 aaKnown RBP27.9■■■□□ 2.06
CDR2-202ENST00000561630 ASPRV1Q53RT3 343 aa27.88■■■□□ 2.05
CDR2-202ENST00000561630 STOX1Q6ZVD7 989 aa27.88■■■□□ 2.05
CDR2-202ENST00000561630 RALYLQ86SE5 291 aaKnown RBP27.88■■■□□ 2.05
CDR2-202ENST00000561630 NCOA7Q8NI08 942 aa27.88■■■□□ 2.05
CDR2-202ENST00000561630 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.88■■■□□ 2.05
CDR2-202ENST00000561630 CYP39A1Q9NYL5 469 aa27.88■■■□□ 2.05
CDR2-202ENST00000561630 RANBP2P49792 3224 aaKnown RBP27.88■■■□□ 2.05
CDR2-202ENST00000561630 DNAH12Q6ZR08 3092 aa27.87■■■□□ 2.05
CDR2-202ENST00000561630 RARBP10826 455 aa27.87■■■□□ 2.05
CDR2-202ENST00000561630 AKR1A1P14550 325 aa27.87■■■□□ 2.05
CDR2-202ENST00000561630 UBA5Q9GZZ9 404 aa27.87■■■□□ 2.05
CDR2-202ENST00000561630 CPVLQ9H3G5 476 aa27.87■■■□□ 2.05
CDR2-202ENST00000561630 WDR19Q8NEZ3 1342 aa27.87■■■□□ 2.05
CDR2-202ENST00000561630 SOWAHBA6NEL2 793 aa27.86■■■□□ 2.05
CDR2-202ENST00000561630 PARP1P09874 1014 aaKnown RBP27.86■■■□□ 2.05
CDR2-202ENST00000561630 GJC2Q5T442 439 aaPredicted RBP27.86■■■□□ 2.05
CDR2-202ENST00000561630 NSMFQ6X4W1 530 aa27.86■■■□□ 2.05
CDR2-202ENST00000561630 ARMCX2Q7L311 632 aa27.86■■■□□ 2.05
CDR2-202ENST00000561630 CCDC144CPQ8IYA2 1237 aa27.86■■■□□ 2.05
CDR2-202ENST00000561630 ABHD16BQ9H3Z7 469 aa27.86■■■□□ 2.05
CDR2-202ENST00000561630 PLXNA1Q9UIW2 1896 aa27.86■■■□□ 2.05
CDR2-202ENST00000561630 NEFLP07196 543 aa27.85■■■□□ 2.05
CDR2-202ENST00000561630 ACVR2BQ13705 512 aa27.85■■■□□ 2.05
CDR2-202ENST00000561630 SENP6Q9GZR1 1112 aaPredicted RBP27.85■■■□□ 2.05
CDR2-202ENST00000561630 XPNPEP3Q9NQH7 507 aa27.85■■■□□ 2.05
CDR2-202ENST00000561630 ZHX1Q9UKY1 873 aaPredicted RBP27.85■■■□□ 2.05
CDR2-202ENST00000561630 FAM184BQ9ULE4 1060 aa27.85■■■□□ 2.05
CDR2-202ENST00000561630 FRMPD3Q5JV73 1810 aa27.84■■■□□ 2.05
CDR2-202ENST00000561630 KBTBD13C9JR72 458 aa27.84■■■□□ 2.05
CDR2-202ENST00000561630 NFIBO00712 420 aa27.84■■■□□ 2.05
CDR2-202ENST00000561630 IFIT3O14879 490 aaKnown RBP27.84■■■□□ 2.05
CDR2-202ENST00000561630 LRRC41Q15345 812 aa27.84■■■□□ 2.05
CDR2-202ENST00000561630 ADGRF4Q8IZF3 695 aa27.84■■■□□ 2.05
CDR2-202ENST00000561630 CLEC4DQ8WXI8 215 aa27.84■■■□□ 2.05
CDR2-202ENST00000561630 ASB14A6NK59 587 aa27.83■■■□□ 2.05
CDR2-202ENST00000561630 SART3Q15020 963 aaKnown RBP27.83■■■□□ 2.05
CDR2-202ENST00000561630 LRRC26Q2I0M4 334 aa27.83■■■□□ 2.05
CDR2-202ENST00000561630 MB21D2Q8IYB1 491 aaPredicted RBP27.83■■■□□ 2.05
CDR2-202ENST00000561630 C7orf61Q8IZ16 206 aa27.83■■■□□ 2.05
CDR2-202ENST00000561630 ANO2Q9NQ90 1003 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms