RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 GJA9P57773 515 aa14.1□□□□□ -0.15
CARMIL3-204ENST00000561354 NKX3-2P78367 333 aa14.1□□□□□ -0.15
CARMIL3-204ENST00000561354 LRRFIP1Q32MZ4 808 aaKnown RBP14.1□□□□□ -0.15
CARMIL3-204ENST00000561354 CCDC144BQ3MJ40 725 aa14.1□□□□□ -0.15
CARMIL3-204ENST00000561354 MFSD5Q6N075 450 aa14.1□□□□□ -0.15
CARMIL3-204ENST00000561354 ARMCX2Q7L311 632 aa14.1□□□□□ -0.15
CARMIL3-204ENST00000561354 NEDD1Q8NHV4 660 aa14.1□□□□□ -0.15
CARMIL3-204ENST00000561354 PLIN4Q96Q06 1357 aa14.09□□□□□ -0.15
CARMIL3-204ENST00000561354 MYH4Q9Y623 1939 aa14.09□□□□□ -0.15
CARMIL3-204ENST00000561354 M0R2C6 588 aa14.09□□□□□ -0.15
CARMIL3-204ENST00000561354 ADCY6O43306 1168 aa14.09□□□□□ -0.15
CARMIL3-204ENST00000561354 APPP05067 770 aa14.09□□□□□ -0.15
CARMIL3-204ENST00000561354 BMP3P12645 472 aa14.09□□□□□ -0.15
CARMIL3-204ENST00000561354 C20orf194Q5TEA3 1177 aa14.09□□□□□ -0.15
CARMIL3-204ENST00000561354 SLFN13Q68D06 897 aa14.09□□□□□ -0.15
CARMIL3-204ENST00000561354 CCDC174Q6PII3 467 aa14.09□□□□□ -0.15
CARMIL3-204ENST00000561354 IFNL3Q8IZI9 196 aa14.09□□□□□ -0.15
CARMIL3-204ENST00000561354 LRRC47Q8N1G4 583 aaKnown RBP14.09□□□□□ -0.15
CARMIL3-204ENST00000561354 NACAP1Q9BZK3 213 aa14.09□□□□□ -0.15
CARMIL3-204ENST00000561354 KATNBL1Q9H079 304 aa14.09□□□□□ -0.15
CARMIL3-204ENST00000561354 A0A0U1RQG5 324 aaPredicted RBP14.08□□□□□ -0.16
CARMIL3-204ENST00000561354 ARVCFO00192 962 aa14.08□□□□□ -0.16
CARMIL3-204ENST00000561354 CTAGE5O15320 804 aa14.08□□□□□ -0.16
CARMIL3-204ENST00000561354 TSPY3P0CV98 308 aa14.08□□□□□ -0.16
CARMIL3-204ENST00000561354 TSPY8P0CW00 308 aa14.08□□□□□ -0.16
CARMIL3-204ENST00000561354 DNAJB2P25686 324 aa14.08□□□□□ -0.16
CARMIL3-204ENST00000561354 IRX5P78411 483 aaPredicted RBP14.08□□□□□ -0.16
CARMIL3-204ENST00000561354 PDE4BQ07343 736 aa14.08□□□□□ -0.16
CARMIL3-204ENST00000561354 PPIGQ13427 754 aaKnown RBP eCLIP14.08□□□□□ -0.16
CARMIL3-204ENST00000561354 GRIN2CQ14957 1233 aa14.08□□□□□ -0.16
CARMIL3-204ENST00000561354 GNASQ5JWF2 1037 aa14.08□□□□□ -0.16
CARMIL3-204ENST00000561354 C16orf59Q7L2K0 433 aa14.08□□□□□ -0.16
CARMIL3-204ENST00000561354 CCDC144CPQ8IYA2 1237 aa14.08□□□□□ -0.16
CARMIL3-204ENST00000561354 FAM133AQ8N9E0 248 aa14.08□□□□□ -0.16
CARMIL3-204ENST00000561354 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.08□□□□□ -0.16
CARMIL3-204ENST00000561354 ACAD9Q9H845 621 aa14.08□□□□□ -0.16
CARMIL3-204ENST00000561354 UNC80Q8N2C7 3258 aa14.08□□□□□ -0.16
CARMIL3-204ENST00000561354 PLA2G6O60733 806 aa14.07□□□□□ -0.16
CARMIL3-204ENST00000561354 SLC3A2P08195 630 aaKnown RBP14.07□□□□□ -0.16
CARMIL3-204ENST00000561354 STAT2P52630 851 aa14.07□□□□□ -0.16
CARMIL3-204ENST00000561354 TFAP4Q01664 338 aa14.07□□□□□ -0.16
CARMIL3-204ENST00000561354 RASIP1Q5U651 963 aa14.07□□□□□ -0.16
CARMIL3-204ENST00000561354 TSHZ3Q63HK5 1081 aa14.07□□□□□ -0.16
CARMIL3-204ENST00000561354 FAM160B2Q86V87 743 aa14.07□□□□□ -0.16
CARMIL3-204ENST00000561354 FAM126BQ8IXS8 530 aa14.07□□□□□ -0.16
CARMIL3-204ENST00000561354 TMEM199Q8N511 208 aa14.07□□□□□ -0.16
CARMIL3-204ENST00000561354 CHURC1Q8WUH1 139 aa14.07□□□□□ -0.16
CARMIL3-204ENST00000561354 VTI1AQ96AJ9 217 aa14.07□□□□□ -0.16
CARMIL3-204ENST00000561354 GMCL1Q96IK5 515 aa14.07□□□□□ -0.16
CARMIL3-204ENST00000561354 ZNF576Q9H609 170 aa14.07□□□□□ -0.16
CARMIL3-204ENST00000561354 TTC41PQ6P2S7 1318 aa14.07□□□□□ -0.16
CARMIL3-204ENST00000561354 MCM3APO60318 1980 aa14.07□□□□□ -0.16
CARMIL3-204ENST00000561354 LAMA2P24043 3122 aaKnown RBP14.06□□□□□ -0.16
CARMIL3-204ENST00000561354 ASB14A6NK59 587 aa14.06□□□□□ -0.16
CARMIL3-204ENST00000561354 TMEM232C9JQI7 657 aa14.06□□□□□ -0.16
CARMIL3-204ENST00000561354 TLR3O15455 904 aaKnown RBP14.06□□□□□ -0.16
CARMIL3-204ENST00000561354 CNTN2Q02246 1040 aa14.06□□□□□ -0.16
CARMIL3-204ENST00000561354 PPARAQ07869 468 aa14.06□□□□□ -0.16
CARMIL3-204ENST00000561354 TKFCQ3LXA3 575 aa14.06□□□□□ -0.16
CARMIL3-204ENST00000561354 PPP4R3BQ5MIZ7 849 aa14.06□□□□□ -0.16
CARMIL3-204ENST00000561354 TMEM240Q5SV17 173 aa14.06□□□□□ -0.16
CARMIL3-204ENST00000561354 STAG1Q8WVM7 1258 aa14.06□□□□□ -0.16
CARMIL3-204ENST00000561354 SYMPKQ92797 1274 aaKnown RBP14.06□□□□□ -0.16
CARMIL3-204ENST00000561354 TIFAQ96CG3 184 aa14.06□□□□□ -0.16
CARMIL3-204ENST00000561354 NAPBQ9H115 298 aa14.06□□□□□ -0.16
CARMIL3-204ENST00000561354 A1CFQ9NQ94 594 aaKnown RBP14.06□□□□□ -0.16
CARMIL3-204ENST00000561354 HOMER2Q9NSB8 354 aa14.06□□□□□ -0.16
CARMIL3-204ENST00000561354 ZNF536O15090 1300 aa14.06□□□□□ -0.16
CARMIL3-204ENST00000561354 SOWAHBA6NEL2 793 aa14.05□□□□□ -0.16
CARMIL3-204ENST00000561354 ERC2O15083 957 aa14.05□□□□□ -0.16
CARMIL3-204ENST00000561354 CABYRO75952 493 aa14.05□□□□□ -0.16
CARMIL3-204ENST00000561354 CD4P01730 458 aa14.05□□□□□ -0.16
CARMIL3-204ENST00000561354 CSF2RAP15509 400 aa14.05□□□□□ -0.16
CARMIL3-204ENST00000561354 SLC1A4P43007 532 aa14.05□□□□□ -0.16
CARMIL3-204ENST00000561354 TNFAIP2Q03169 654 aa14.05□□□□□ -0.16
CARMIL3-204ENST00000561354 PSRC1Q6PGN9 363 aaPredicted RBP14.05□□□□□ -0.16
CARMIL3-204ENST00000561354 CCDC129Q6ZRS4 1044 aa14.05□□□□□ -0.16
CARMIL3-204ENST00000561354 SLC43A3Q8NBI5 491 aa14.05□□□□□ -0.16
CARMIL3-204ENST00000561354 SEC62Q99442 399 aaKnown RBP14.05□□□□□ -0.16
CARMIL3-204ENST00000561354 SEZ6LQ9BYH1 1024 aa14.05□□□□□ -0.16
CARMIL3-204ENST00000561354 RNF146Q9NTX7 359 aa14.05□□□□□ -0.16
CARMIL3-204ENST00000561354 GNEQ9Y223 722 aaKnown RBP14.05□□□□□ -0.16
CARMIL3-204ENST00000561354 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.04□□□□□ -0.16
CARMIL3-204ENST00000561354 MCCP23508 829 aa14.04□□□□□ -0.16
CARMIL3-204ENST00000561354 ZMYM1Q5SVZ6 1142 aa14.04□□□□□ -0.16
CARMIL3-204ENST00000561354 RCSD1Q6JBY9 416 aa14.04□□□□□ -0.16
CARMIL3-204ENST00000561354 ZNF365Q70YC5 407 aa14.04□□□□□ -0.16
CARMIL3-204ENST00000561354 PI4K2BQ8TCG2 481 aa14.04□□□□□ -0.16
CARMIL3-204ENST00000561354 AGBL1Q96MI9 1066 aa14.04□□□□□ -0.16
CARMIL3-204ENST00000561354 TRERF1Q96PN7 1200 aa14.04□□□□□ -0.16
CARMIL3-204ENST00000561354 PBX4Q9BYU1 374 aa14.04□□□□□ -0.16
CARMIL3-204ENST00000561354 PPP1R12CQ9BZL4 782 aa14.04□□□□□ -0.16
CARMIL3-204ENST00000561354 Q9Y3F1 56 aa14.04□□□□□ -0.16
CARMIL3-204ENST00000561354 ASTN1O14525 1302 aa14.04□□□□□ -0.16
CARMIL3-204ENST00000561354 BEX3Q00994 111 aa14.03□□□□□ -0.16
CARMIL3-204ENST00000561354 IKQ13123 557 aaPredicted RBP14.03□□□□□ -0.16
CARMIL3-204ENST00000561354 IQSEC1Q6DN90 963 aa14.03□□□□□ -0.16
CARMIL3-204ENST00000561354 CXCL17Q6UXB2 119 aa14.03□□□□□ -0.16
CARMIL3-204ENST00000561354 NOL8Q76FK4 1167 aaKnown RBP14.03□□□□□ -0.16
CARMIL3-204ENST00000561354 TLK2Q86UE8 772 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms