RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 PDE1AP54750 535 aa8.85□□□□□ -0.99
ZEB1-223ENST00000561304 COG2Q14746 738 aa8.85□□□□□ -0.99
ZEB1-223ENST00000561304 FAM83BQ5T0W9 1011 aa8.85□□□□□ -0.99
ZEB1-223ENST00000561304 VPS53Q5VIR6 699 aa8.85□□□□□ -0.99
ZEB1-223ENST00000561304 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.85□□□□□ -0.99
ZEB1-223ENST00000561304 LPAR1Q92633 364 aa8.85□□□□□ -0.99
ZEB1-223ENST00000561304 GCC1Q96CN9 775 aa8.85□□□□□ -0.99
ZEB1-223ENST00000561304 PAWRQ96IZ0 340 aaKnown RBP8.85□□□□□ -0.99
ZEB1-223ENST00000561304 LNPKQ9C0E8 428 aa8.85□□□□□ -0.99
ZEB1-223ENST00000561304 SPATC1LQ9H0A9 340 aa8.85□□□□□ -0.99
ZEB1-223ENST00000561304 KANSL2Q9H9L4 492 aa8.85□□□□□ -0.99
ZEB1-223ENST00000561304 HMX1Q9NP08 348 aaPredicted RBP8.85□□□□□ -0.99
ZEB1-223ENST00000561304 TSR3Q9UJK0 312 aaKnown RBP8.85□□□□□ -0.99
ZEB1-223ENST00000561304 TRIOBPQ9H2D6 2365 aa8.84□□□□□ -0.99
ZEB1-223ENST00000561304 A0A0D9SFI3 127 aa8.84□□□□□ -0.99
ZEB1-223ENST00000561304 SLC15A5A6NIM6 579 aa8.84□□□□□ -0.99
ZEB1-223ENST00000561304 PATL2C9JE40 543 aaKnown RBP8.84□□□□□ -0.99
ZEB1-223ENST00000561304 APPP05067 770 aa8.84□□□□□ -0.99
ZEB1-223ENST00000561304 ERCC3P19447 782 aa8.84□□□□□ -0.99
ZEB1-223ENST00000561304 CCNA1P78396 465 aa8.84□□□□□ -0.99
ZEB1-223ENST00000561304 TMEM132BQ14DG7 1078 aa8.84□□□□□ -0.99
ZEB1-223ENST00000561304 HABP4Q5JVS0 413 aaKnown RBP8.84□□□□□ -0.99
ZEB1-223ENST00000561304 CCAR1Q8IX12 1150 aaKnown RBP8.84□□□□□ -0.99
ZEB1-223ENST00000561304 SMC5Q8IY18 1101 aa8.84□□□□□ -0.99
ZEB1-223ENST00000561304 TRPV1Q8NER1 839 aa8.84□□□□□ -0.99
ZEB1-223ENST00000561304 REPS2Q8NFH8 660 aa8.84□□□□□ -0.99
ZEB1-223ENST00000561304 DPF3Q92784 378 aa8.84□□□□□ -0.99
ZEB1-223ENST00000561304 CEP95Q96GE4 821 aa8.84□□□□□ -0.99
ZEB1-223ENST00000561304 FAM227BQ96M60 508 aa8.84□□□□□ -0.99
ZEB1-223ENST00000561304 SH2D4AQ9H788 454 aa8.84□□□□□ -0.99
ZEB1-223ENST00000561304 INCENPQ9NQS7 918 aa8.84□□□□□ -0.99
ZEB1-223ENST00000561304 ADAMTS5Q9UNA0 930 aa8.84□□□□□ -0.99
ZEB1-223ENST00000561304 PFASO15067 1338 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 RAD21O60216 631 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 COBLO75128 1261 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 NDUFB10O96000 172 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 HOXC6P09630 235 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 GNAT2P19087 354 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 DNAJB2P25686 324 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 ADORA2AP29274 412 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 CYP2C19P33261 490 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 CTDSPL2Q05D32 466 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 PPARAQ07869 468 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 PLS1Q14651 629 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 FAM47AQ5JRC9 791 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 B4GALNT3Q6L9W6 998 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 RASGRP2Q7LDG7 609 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 LRRC47Q8N1G4 583 aaKnown RBP8.83□□□□□ -1
ZEB1-223ENST00000561304 NAPBQ9H115 298 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 MKNK2Q9HBH9 465 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 CWC22Q9HCG8 908 aaKnown RBP8.83□□□□□ -1
ZEB1-223ENST00000561304 GOPCQ9HD26 462 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 HOXC10Q9NYD6 342 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 OGDHLQ9ULD0 1010 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 PPP1R9AQ9ULJ8 1098 aa8.83□□□□□ -1
ZEB1-223ENST00000561304 COL6A3P12111 3177 aa8.82□□□□□ -1
ZEB1-223ENST00000561304 VWA5AO00534 786 aa8.82□□□□□ -1
ZEB1-223ENST00000561304 SLC4A3P48751 1232 aa8.82□□□□□ -1
ZEB1-223ENST00000561304 ZNF589Q86UQ0 364 aaPredicted RBP8.82□□□□□ -1
ZEB1-223ENST00000561304 NCAPG2Q86XI2 1143 aa8.82□□□□□ -1
ZEB1-223ENST00000561304 TRMT44Q8IYL2 757 aaKnown RBP8.82□□□□□ -1
ZEB1-223ENST00000561304 MB21D1Q8N884 522 aa8.82□□□□□ -1
ZEB1-223ENST00000561304 ANKLE1Q8NAG6 615 aa8.82□□□□□ -1
ZEB1-223ENST00000561304 SHCBP1Q8NEM2 672 aa8.82□□□□□ -1
ZEB1-223ENST00000561304 EVI5LQ96CN4 794 aa8.82□□□□□ -1
ZEB1-223ENST00000561304 HTATIP2Q9BUP3 242 aa8.82□□□□□ -1
ZEB1-223ENST00000561304 MTMR4Q9NYA4 1195 aa8.82□□□□□ -1
ZEB1-223ENST00000561304 NYAP2Q9P242 653 aa8.82□□□□□ -1
ZEB1-223ENST00000561304 CLIP2Q9UDT6 1046 aa8.82□□□□□ -1
ZEB1-223ENST00000561304 ZNF214Q9UL59 606 aaPredicted RBP8.82□□□□□ -1
ZEB1-223ENST00000561304 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.82□□□□□ -1
ZEB1-223ENST00000561304 IVNS1ABPQ9Y6Y0 642 aa8.82□□□□□ -1
ZEB1-223ENST00000561304 F5H6K3 240 aa8.81□□□□□ -1
ZEB1-223ENST00000561304 NMT2O60551 498 aa8.81□□□□□ -1
ZEB1-223ENST00000561304 PGK2P07205 417 aa8.81□□□□□ -1
ZEB1-223ENST00000561304 CYBAP13498 195 aa8.81□□□□□ -1
ZEB1-223ENST00000561304 NUCB1Q02818 461 aa8.81□□□□□ -1
ZEB1-223ENST00000561304 KLRC3Q07444 240 aa8.81□□□□□ -1
ZEB1-223ENST00000561304 NMIQ13287 307 aaPredicted RBP8.81□□□□□ -1
ZEB1-223ENST00000561304 LRRFIP1Q32MZ4 808 aaKnown RBP8.81□□□□□ -1
ZEB1-223ENST00000561304 NECAB2Q7Z6G3 386 aa8.81□□□□□ -1
ZEB1-223ENST00000561304 PLEKHM2Q8IWE5 1019 aa8.81□□□□□ -1
ZEB1-223ENST00000561304 NEDD1Q8NHV4 660 aa8.81□□□□□ -1
ZEB1-223ENST00000561304 CHMP4CQ96CF2 233 aa8.81□□□□□ -1
ZEB1-223ENST00000561304 PRO3102Q9H379 93 aa8.81□□□□□ -1
ZEB1-223ENST00000561304 RIPK3Q9Y572 518 aa8.81□□□□□ -1
ZEB1-223ENST00000561304 EYSQ5T1H1 3165 aa8.8□□□□□ -1
ZEB1-223ENST00000561304 COL6A1P12109 1028 aa8.8□□□□□ -1
ZEB1-223ENST00000561304 FECHP22830 423 aa8.8□□□□□ -1
ZEB1-223ENST00000561304 FXR1P51114 621 aaKnown RBP eCLIP8.8□□□□□ -1
ZEB1-223ENST00000561304 IRX6P78412 446 aaPredicted RBP8.8□□□□□ -1
ZEB1-223ENST00000561304 TFAP4Q01664 338 aa8.8□□□□□ -1
ZEB1-223ENST00000561304 PRAMEF19Q5SWL8 479 aa8.8□□□□□ -1
ZEB1-223ENST00000561304 SWT1Q5T5J6 900 aaKnown RBP8.8□□□□□ -1
ZEB1-223ENST00000561304 MFSD14CQ5VZR4 134 aa8.8□□□□□ -1
ZEB1-223ENST00000561304 ANO1Q5XXA6 986 aa8.8□□□□□ -1
ZEB1-223ENST00000561304 OLFML2BQ68BL8 750 aa8.8□□□□□ -1
ZEB1-223ENST00000561304 DPP9Q86TI2 863 aa8.8□□□□□ -1
ZEB1-223ENST00000561304 METTL3Q86U44 580 aaKnown RBP8.8□□□□□ -1
ZEB1-223ENST00000561304 CHD1LQ86WJ1 897 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms