RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CYP2B6P20813 491 aa12.4□□□□□ -0.42
TPM1-229ENST00000561242 SMARCA1P28370 1054 aa12.4□□□□□ -0.42
TPM1-229ENST00000561242 NOVP48745 357 aa12.4□□□□□ -0.42
TPM1-229ENST00000561242 MCM2P49736 904 aa12.4□□□□□ -0.42
TPM1-229ENST00000561242 RCAN1P53805 252 aa12.4□□□□□ -0.42
TPM1-229ENST00000561242 EXOSC10Q01780 885 aaKnown RBP12.4□□□□□ -0.42
TPM1-229ENST00000561242 APOBRQ0VD83 1088 aa12.4□□□□□ -0.42
TPM1-229ENST00000561242 TMEM132BQ14DG7 1078 aa12.4□□□□□ -0.42
TPM1-229ENST00000561242 RABEP1Q15276 862 aa12.4□□□□□ -0.42
TPM1-229ENST00000561242 CDC37Q16543 378 aaPredicted RBP12.4□□□□□ -0.42
TPM1-229ENST00000561242 USH1GQ495M9 461 aa12.4□□□□□ -0.42
TPM1-229ENST00000561242 TTBK2Q6IQ55 1244 aa12.4□□□□□ -0.42
TPM1-229ENST00000561242 BTNL9Q6UXG8 535 aa12.4□□□□□ -0.42
TPM1-229ENST00000561242 NSMFQ6X4W1 530 aa12.4□□□□□ -0.42
TPM1-229ENST00000561242 OTOP1Q7RTM1 612 aa12.4□□□□□ -0.42
TPM1-229ENST00000561242 SGMS1Q86VZ5 419 aa12.4□□□□□ -0.42
TPM1-229ENST00000561242 R3HDMLQ9H3Y0 253 aa12.4□□□□□ -0.42
TPM1-229ENST00000561242 EHMT1Q9H9B1 1298 aa12.4□□□□□ -0.42
TPM1-229ENST00000561242 ADD3Q9UEY8 706 aaKnown RBP12.4□□□□□ -0.42
TPM1-229ENST00000561242 KIF3AQ9Y496 699 aa12.4□□□□□ -0.42
TPM1-229ENST00000561242 ABCB11O95342 1321 aa12.39□□□□□ -0.43
TPM1-229ENST00000561242 PNMA6FA0A0J9YX94 578 aa12.39□□□□□ -0.43
TPM1-229ENST00000561242 POTEB2H3BUK9 544 aa12.39□□□□□ -0.43
TPM1-229ENST00000561242 ZBTB5O15062 677 aa12.39□□□□□ -0.43
TPM1-229ENST00000561242 ADCY3O60266 1144 aa12.39□□□□□ -0.43
TPM1-229ENST00000561242 FLT3LGP49771 235 aa12.39□□□□□ -0.43
TPM1-229ENST00000561242 ANTXR2P58335 489 aa12.39□□□□□ -0.43
TPM1-229ENST00000561242 SSRP1Q08945 709 aaKnown RBP12.39□□□□□ -0.43
TPM1-229ENST00000561242 Q3C1V9 767 aa12.39□□□□□ -0.43
TPM1-229ENST00000561242 C8orf34Q49A92 452 aa12.39□□□□□ -0.43
TPM1-229ENST00000561242 KIAA1755Q5JYT7 1200 aa12.39□□□□□ -0.43
TPM1-229ENST00000561242 APOA5Q6Q788 366 aa12.39□□□□□ -0.43
TPM1-229ENST00000561242 NOL8Q76FK4 1167 aaKnown RBP12.39□□□□□ -0.43
TPM1-229ENST00000561242 ABRAQ8N0Z2 381 aa12.39□□□□□ -0.43
TPM1-229ENST00000561242 SLAIN1Q8ND83 568 aa12.39□□□□□ -0.43
TPM1-229ENST00000561242 WASF1Q92558 559 aa12.39□□□□□ -0.43
TPM1-229ENST00000561242 ZNF274Q96GC6 653 aaPredicted RBP12.39□□□□□ -0.43
TPM1-229ENST00000561242 ZSCAN31Q96LW9 406 aaPredicted RBP12.39□□□□□ -0.43
TPM1-229ENST00000561242 MYL10Q9BUA6 226 aa12.39□□□□□ -0.43
TPM1-229ENST00000561242 GLT8D2Q9H1C3 349 aa12.39□□□□□ -0.43
TPM1-229ENST00000561242 RNF146Q9NTX7 359 aa12.39□□□□□ -0.43
TPM1-229ENST00000561242 BTBD7Q9P203 1132 aa12.39□□□□□ -0.43
TPM1-229ENST00000561242 PTPN22Q9Y2R2 807 aa12.39□□□□□ -0.43
TPM1-229ENST00000561242 PCDHA1Q9Y5I3 950 aa12.39□□□□□ -0.43
TPM1-229ENST00000561242 PFASO15067 1338 aa12.38□□□□□ -0.43
TPM1-229ENST00000561242 DOCK1Q14185 1865 aa12.38□□□□□ -0.43
TPM1-229ENST00000561242 PALM3A6NDB9 673 aaPredicted RBP12.38□□□□□ -0.43
TPM1-229ENST00000561242 ATP2A1O14983 1001 aa12.38□□□□□ -0.43
TPM1-229ENST00000561242 HSP90AA1P07900 732 aaKnown RBP12.38□□□□□ -0.43
TPM1-229ENST00000561242 SNHG28P0DPA3 235 aa12.38□□□□□ -0.43
TPM1-229ENST00000561242 CPA1P15085 419 aa12.38□□□□□ -0.43
TPM1-229ENST00000561242 RXRAP19793 462 aa12.38□□□□□ -0.43
TPM1-229ENST00000561242 PTPREP23469 700 aa12.38□□□□□ -0.43
TPM1-229ENST00000561242 GRK4P32298 578 aa12.38□□□□□ -0.43
TPM1-229ENST00000561242 SNAP25P60880 206 aa12.38□□□□□ -0.43
TPM1-229ENST00000561242 CCT2P78371 535 aaKnown RBP12.38□□□□□ -0.43
TPM1-229ENST00000561242 MAP2K5Q13163 448 aa12.38□□□□□ -0.43
TPM1-229ENST00000561242 STK3Q13188 491 aa12.38□□□□□ -0.43
TPM1-229ENST00000561242 TRIM29Q14134 588 aa12.38□□□□□ -0.43
TPM1-229ENST00000561242 RAB11FIP4Q86YS3 637 aa12.38□□□□□ -0.43
TPM1-229ENST00000561242 SMARCC2Q8TAQ2 1214 aa12.38□□□□□ -0.43
TPM1-229ENST00000561242 AGBL1Q96MI9 1066 aa12.38□□□□□ -0.43
TPM1-229ENST00000561242 RANBP17Q9H2T7 1088 aaKnown RBP12.38□□□□□ -0.43
TPM1-229ENST00000561242 TXNRD2Q9NNW7 524 aa12.38□□□□□ -0.43
TPM1-229ENST00000561242 CNPY2Q9Y2B0 182 aa12.38□□□□□ -0.43
TPM1-229ENST00000561242 TAF6LQ9Y6J9 622 aa12.38□□□□□ -0.43
TPM1-229ENST00000561242 ADORA2AP29274 412 aa12.37□□□□□ -0.43
TPM1-229ENST00000561242 CNGA1P29973 690 aa12.37□□□□□ -0.43
TPM1-229ENST00000561242 PRKCZQ05513 592 aa12.37□□□□□ -0.43
TPM1-229ENST00000561242 TROAPQ12815 778 aa12.37□□□□□ -0.43
TPM1-229ENST00000561242 RNF207Q6ZRF8 634 aa12.37□□□□□ -0.43
TPM1-229ENST00000561242 HEATR3Q7Z4Q2 680 aa12.37□□□□□ -0.43
TPM1-229ENST00000561242 SAMD3Q8N6K7 520 aa12.37□□□□□ -0.43
TPM1-229ENST00000561242 APBA2Q99767 749 aa12.37□□□□□ -0.43
TPM1-229ENST00000561242 SPZ1Q9BXG8 430 aa12.37□□□□□ -0.43
TPM1-229ENST00000561242 MAF1Q9H063 256 aa12.37□□□□□ -0.43
TPM1-229ENST00000561242 DAXXQ9UER7 740 aaPredicted RBP12.37□□□□□ -0.43
TPM1-229ENST00000561242 MAD2L2Q9UI95 211 aa12.37□□□□□ -0.43
TPM1-229ENST00000561242 ADAMTS5Q9UNA0 930 aa12.37□□□□□ -0.43
TPM1-229ENST00000561242 LIMCH1Q9UPQ0 1083 aa12.37□□□□□ -0.43
TPM1-229ENST00000561242 BAZ2AQ9UIF9 1905 aaKnown RBP12.37□□□□□ -0.43
TPM1-229ENST00000561242 ASB14A6NK59 587 aa12.36□□□□□ -0.43
TPM1-229ENST00000561242 CCDC85CA6NKD9 419 aa12.36□□□□□ -0.43
TPM1-229ENST00000561242 GCOM1H8Y6P7 765 aaPredicted RBP12.36□□□□□ -0.43
TPM1-229ENST00000561242 SEC24BO95487 1268 aa12.36□□□□□ -0.43
TPM1-229ENST00000561242 CFBP00751 764 aa12.36□□□□□ -0.43
TPM1-229ENST00000561242 POLR2MP0CAP2 368 aa12.36□□□□□ -0.43
TPM1-229ENST00000561242 CALML3P27482 149 aa12.36□□□□□ -0.43
TPM1-229ENST00000561242 IRF5Q13568 498 aa12.36□□□□□ -0.43
TPM1-229ENST00000561242 QRICH1Q2TAL8 776 aa12.36□□□□□ -0.43
TPM1-229ENST00000561242 STAG2Q8N3U4 1231 aa12.36□□□□□ -0.43
TPM1-229ENST00000561242 FAM184AQ8NB25 1140 aa12.36□□□□□ -0.43
TPM1-229ENST00000561242 BICD2Q8TD16 824 aa12.36□□□□□ -0.43
TPM1-229ENST00000561242 PIGSQ96S52 555 aa12.36□□□□□ -0.43
TPM1-229ENST00000561242 SLC26A6Q9BXS9 759 aa12.36□□□□□ -0.43
TPM1-229ENST00000561242 BACH2Q9BYV9 841 aa12.36□□□□□ -0.43
TPM1-229ENST00000561242 MCOLN1Q9GZU1 580 aa12.36□□□□□ -0.43
TPM1-229ENST00000561242 PORCNQ9H237 461 aa12.36□□□□□ -0.43
TPM1-229ENST00000561242 JMJD4Q9H9V9 463 aa12.36□□□□□ -0.43
TPM1-229ENST00000561242 BRMS1Q9HCU9 246 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms