RNA–Protein interactions for RNA: ENST00000561239.6

SHF-210, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3

Gene SHF, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-210ENST00000561239 NPLOC4Q8TAT6 608 aa15.86■□□□□ 0.13
SHF-210ENST00000561239 HTATIP2Q9BUP3 242 aa15.86■□□□□ 0.13
SHF-210ENST00000561239 PNMA2Q9UL42 364 aa15.86■□□□□ 0.13
SHF-210ENST00000561239 SNX14Q9Y5W7 946 aa15.86■□□□□ 0.13
SHF-210ENST00000561239 COBLO75128 1261 aa15.85■□□□□ 0.13
SHF-210ENST00000561239 MCM5P33992 734 aa15.85■□□□□ 0.13
SHF-210ENST00000561239 TKFCQ3LXA3 575 aa15.85■□□□□ 0.13
SHF-210ENST00000561239 PRPF38BQ5VTL8 546 aaKnown RBP15.85■□□□□ 0.13
SHF-210ENST00000561239 KCTD1Q719H9 257 aa15.85■□□□□ 0.13
SHF-210ENST00000561239 PNMA1Q8ND90 353 aa15.85■□□□□ 0.13
SHF-210ENST00000561239 IL17RAQ96F46 866 aa15.85■□□□□ 0.13
SHF-210ENST00000561239 DDX11Q96FC9 970 aa15.85■□□□□ 0.13
SHF-210ENST00000561239 NEK1Q96PY6 1258 aa15.85■□□□□ 0.13
SHF-210ENST00000561239 SENP2Q9HC62 589 aa15.85■□□□□ 0.13
SHF-210ENST00000561239 RAVER2Q9HCJ3 691 aaKnown RBP15.85■□□□□ 0.13
SHF-210ENST00000561239 MTMR7Q9Y216 660 aa15.85■□□□□ 0.13
SHF-210ENST00000561239 SH2B2O14492 632 aaPredicted RBP15.84■□□□□ 0.13
SHF-210ENST00000561239 IFIT3O14879 490 aaKnown RBP15.84■□□□□ 0.13
SHF-210ENST00000561239 PRC1O43663 620 aa15.84■□□□□ 0.13
SHF-210ENST00000561239 SEC24BO95487 1268 aa15.84■□□□□ 0.13
SHF-210ENST00000561239 SLC4A3P48751 1232 aa15.84■□□□□ 0.13
SHF-210ENST00000561239 ZNF543Q08ER8 600 aa15.84■□□□□ 0.13
SHF-210ENST00000561239 IFIT1BQ5T764 474 aaKnown RBP15.84■□□□□ 0.13
SHF-210ENST00000561239 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.84■□□□□ 0.13
SHF-210ENST00000561239 CHST3Q7LGC8 479 aa15.84■□□□□ 0.13
SHF-210ENST00000561239 MSL3Q8N5Y2 521 aaKnown RBP15.84■□□□□ 0.13
SHF-210ENST00000561239 TMEM87BQ96K49 555 aa15.84■□□□□ 0.13
SHF-210ENST00000561239 KAT14Q9H8E8 782 aa15.84■□□□□ 0.13
SHF-210ENST00000561239 LY9Q9HBG7 655 aa15.84■□□□□ 0.13
SHF-210ENST00000561239 FLRT1Q9NZU1 646 aa15.84■□□□□ 0.13
SHF-210ENST00000561239 NRBP1Q9UHY1 535 aa15.84■□□□□ 0.13
SHF-210ENST00000561239 OGDHLQ9ULD0 1010 aa15.84■□□□□ 0.13
SHF-210ENST00000561239 COL11A1P12107 1806 aaPredicted RBP15.84■□□□□ 0.13
SHF-210ENST00000561239 EIF5BO60841 1220 aaKnown RBP15.83■□□□□ 0.12
SHF-210ENST00000561239 CNGA1P29973 690 aa15.83■□□□□ 0.12
SHF-210ENST00000561239 LIFRP42702 1097 aa15.83■□□□□ 0.12
SHF-210ENST00000561239 GPATCH4Q5T3I0 446 aaKnown RBP15.83■□□□□ 0.12
SHF-210ENST00000561239 DHX32Q7L7V1 743 aaKnown RBP15.83■□□□□ 0.12
SHF-210ENST00000561239 NECAB2Q7Z6G3 386 aa15.83■□□□□ 0.12
SHF-210ENST00000561239 UBE2Q1Q7Z7E8 422 aa15.83■□□□□ 0.12
SHF-210ENST00000561239 ANKRD35Q8N283 1001 aa15.83■□□□□ 0.12
SHF-210ENST00000561239 MAML3Q96JK9 1138 aa15.83■□□□□ 0.12
SHF-210ENST00000561239 GPHNQ9NQX3 736 aaPredicted RBP15.83■□□□□ 0.12
SHF-210ENST00000561239 PRR12Q9ULL5 1215 aa15.83■□□□□ 0.12
SHF-210ENST00000561239 IGHA2P01877 340 aa15.82■□□□□ 0.12
SHF-210ENST00000561239 HMGB1P09429 215 aaKnown RBP15.82■□□□□ 0.12
SHF-210ENST00000561239 CCND3P30281 292 aaPredicted RBP15.82■□□□□ 0.12
SHF-210ENST00000561239 CYP2C19P33261 490 aa15.82■□□□□ 0.12
SHF-210ENST00000561239 TROAPQ12815 778 aa15.82■□□□□ 0.12
SHF-210ENST00000561239 WTAPQ15007 396 aa15.82■□□□□ 0.12
SHF-210ENST00000561239 SART3Q15020 963 aaKnown RBP15.82■□□□□ 0.12
SHF-210ENST00000561239 TMEM67Q5HYA8 995 aa15.82■□□□□ 0.12
SHF-210ENST00000561239 SGMS1Q86VZ5 419 aa15.82■□□□□ 0.12
SHF-210ENST00000561239 FBXL16Q8N461 479 aa15.82■□□□□ 0.12
SHF-210ENST00000561239 CHMP4CQ96CF2 233 aa15.82■□□□□ 0.12
SHF-210ENST00000561239 ACAD9Q9H845 621 aa15.82■□□□□ 0.12
SHF-210ENST00000561239 DDX20Q9UHI6 824 aaKnown RBP15.82■□□□□ 0.12
SHF-210ENST00000561239 RIPK3Q9Y572 518 aa15.82■□□□□ 0.12
SHF-210ENST00000561239 TNRC18O15417 2968 aaPredicted RBP15.82■□□□□ 0.12
SHF-210ENST00000561239 ERICH2A1L162 156 aa15.81■□□□□ 0.12
SHF-210ENST00000561239 ZNF792Q3KQV3 632 aa15.81■□□□□ 0.12
SHF-210ENST00000561239 SYDE2Q5VT97 1194 aa15.81■□□□□ 0.12
SHF-210ENST00000561239 TTBK2Q6IQ55 1244 aa15.81■□□□□ 0.12
SHF-210ENST00000561239 ZNF467Q7Z7K2 595 aaPredicted RBP15.81■□□□□ 0.12
SHF-210ENST00000561239 DPF3Q92784 378 aa15.81■□□□□ 0.12
SHF-210ENST00000561239 TINF2Q9BSI4 451 aa15.81■□□□□ 0.12
SHF-210ENST00000561239 TM6SF1Q9BZW5 370 aa15.81■□□□□ 0.12
SHF-210ENST00000561239 RANBP17Q9H2T7 1088 aaKnown RBP15.81■□□□□ 0.12
SHF-210ENST00000561239 MKI67P46013 3256 aaKnown RBP15.81■□□□□ 0.12
SHF-210ENST00000561239 PFASO15067 1338 aa15.8■□□□□ 0.12
SHF-210ENST00000561239 ZNF536O15090 1300 aa15.8■□□□□ 0.12
SHF-210ENST00000561239 FRMPD2Q68DX3 1309 aaPredicted RBP15.8■□□□□ 0.12
SHF-210ENST00000561239 ICAM1P05362 532 aa15.8■□□□□ 0.12
SHF-210ENST00000561239 PGK2P07205 417 aa15.8■□□□□ 0.12
SHF-210ENST00000561239 CYBAP13498 195 aa15.8■□□□□ 0.12
SHF-210ENST00000561239 ANAPC15P60006 121 aa15.8■□□□□ 0.12
SHF-210ENST00000561239 ASPRV1Q53RT3 343 aa15.8■□□□□ 0.12
SHF-210ENST00000561239 LHX8Q68G74 356 aa15.8■□□□□ 0.12
SHF-210ENST00000561239 CCDC174Q6PII3 467 aa15.8■□□□□ 0.12
SHF-210ENST00000561239 TMTC2Q8N394 836 aa15.8■□□□□ 0.12
SHF-210ENST00000561239 PAWRQ96IZ0 340 aaKnown RBP15.8■□□□□ 0.12
SHF-210ENST00000561239 JAKMIP1Q96N16 626 aaKnown RBP15.8■□□□□ 0.12
SHF-210ENST00000561239 TRERF1Q96PN7 1200 aa15.8■□□□□ 0.12
SHF-210ENST00000561239 MAP3K14Q99558 947 aa15.8■□□□□ 0.12
SHF-210ENST00000561239 AGXT2Q9BYV1 514 aa15.8■□□□□ 0.12
SHF-210ENST00000561239 ZSWIM6Q9HCJ5 1215 aa15.8■□□□□ 0.12
SHF-210ENST00000561239 GPCPD1Q9NPB8 672 aa15.8■□□□□ 0.12
SHF-210ENST00000561239 HOMER2Q9NSB8 354 aa15.8■□□□□ 0.12
SHF-210ENST00000561239 CNPY2Q9Y2B0 182 aa15.8■□□□□ 0.12
SHF-210ENST00000561239 SYNGAP1Q96PV0 1343 aa15.79■□□□□ 0.12
SHF-210ENST00000561239 DNAJC25-GNG10A0A024R161 153 aa15.79■□□□□ 0.12
SHF-210ENST00000561239 PALM3A6NDB9 673 aaPredicted RBP15.79■□□□□ 0.12
SHF-210ENST00000561239 SEPT4O43236 478 aa15.79■□□□□ 0.12
SHF-210ENST00000561239 ALAS1P13196 640 aa15.79■□□□□ 0.12
SHF-210ENST00000561239 SLC16A2P36021 539 aa15.79■□□□□ 0.12
SHF-210ENST00000561239 GRM4Q14833 912 aa15.79■□□□□ 0.12
SHF-210ENST00000561239 ARRDC4Q8NCT1 418 aa15.79■□□□□ 0.12
SHF-210ENST00000561239 AGBL1Q96MI9 1066 aa15.79■□□□□ 0.12
SHF-210ENST00000561239 C11orf49Q9H6J7 331 aa15.79■□□□□ 0.12
SHF-210ENST00000561239 RNF146Q9NTX7 359 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms