RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 RPAP2Q8IXW5 612 aaPredicted RBP8.73□□□□□ -1.01
GABPB1-211ENST00000561010 TRPV1Q8NER1 839 aa8.73□□□□□ -1.01
GABPB1-211ENST00000561010 APBA2Q99767 749 aa8.73□□□□□ -1.01
GABPB1-211ENST00000561010 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.73□□□□□ -1.01
GABPB1-211ENST00000561010 C11orf49Q9H6J7 331 aa8.73□□□□□ -1.01
GABPB1-211ENST00000561010 OGDHLQ9ULD0 1010 aa8.73□□□□□ -1.01
GABPB1-211ENST00000561010 SLC27A5Q9Y2P5 690 aa8.73□□□□□ -1.01
GABPB1-211ENST00000561010 RABGAP1Q9Y3P9 1069 aa8.73□□□□□ -1.01
GABPB1-211ENST00000561010 USP17L12C9JPN9 530 aa8.72□□□□□ -1.01
GABPB1-211ENST00000561010 USP17L21D6R901 530 aa8.72□□□□□ -1.01
GABPB1-211ENST00000561010 HMMRO75330 724 aa8.72□□□□□ -1.01
GABPB1-211ENST00000561010 XRCC5P13010 732 aaKnown RBP8.72□□□□□ -1.01
GABPB1-211ENST00000561010 ATP5JP18859 108 aa8.72□□□□□ -1.01
GABPB1-211ENST00000561010 CNGA1P29973 690 aa8.72□□□□□ -1.01
GABPB1-211ENST00000561010 USP14P54578 494 aa8.72□□□□□ -1.01
GABPB1-211ENST00000561010 ATP2B2Q01814 1243 aa8.72□□□□□ -1.01
GABPB1-211ENST00000561010 PLS1Q14651 629 aa8.72□□□□□ -1.01
GABPB1-211ENST00000561010 LRRC26Q2I0M4 334 aa8.72□□□□□ -1.01
GABPB1-211ENST00000561010 ATG4CQ96DT6 458 aa8.72□□□□□ -1.01
GABPB1-211ENST00000561010 HAUS7Q99871 368 aa8.72□□□□□ -1.01
GABPB1-211ENST00000561010 MOV10L1Q9BXT6 1211 aaKnown RBP8.72□□□□□ -1.01
GABPB1-211ENST00000561010 PUS7LQ9H0K6 701 aaKnown RBP8.72□□□□□ -1.01
GABPB1-211ENST00000561010 PCDHGC3Q9UN70 934 aa8.72□□□□□ -1.01
GABPB1-211ENST00000561010 SLC15A5A6NIM6 579 aa8.71□□□□□ -1.02
GABPB1-211ENST00000561010 RAD21O60216 631 aa8.71□□□□□ -1.02
GABPB1-211ENST00000561010 RAB11FIP3O75154 756 aa8.71□□□□□ -1.02
GABPB1-211ENST00000561010 MAGEA10P43363 369 aaPredicted RBP8.71□□□□□ -1.02
GABPB1-211ENST00000561010 CDK8P49336 464 aa8.71□□□□□ -1.02
GABPB1-211ENST00000561010 GRB14Q14449 540 aa8.71□□□□□ -1.02
GABPB1-211ENST00000561010 PRAMEF19Q5SWL8 479 aa8.71□□□□□ -1.02
GABPB1-211ENST00000561010 CERS3Q8IU89 383 aa8.71□□□□□ -1.02
GABPB1-211ENST00000561010 SCUBE3Q8IX30 993 aa8.71□□□□□ -1.02
GABPB1-211ENST00000561010 ANKLE1Q8NAG6 615 aa8.71□□□□□ -1.02
GABPB1-211ENST00000561010 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.71□□□□□ -1.02
GABPB1-211ENST00000561010 GTF3C2Q8WUA4 911 aaPredicted RBP8.71□□□□□ -1.02
GABPB1-211ENST00000561010 MTRQ99707 1265 aa8.71□□□□□ -1.02
GABPB1-211ENST00000561010 GDF15Q99988 308 aa8.71□□□□□ -1.02
GABPB1-211ENST00000561010 PRKD2Q9BZL6 878 aa8.71□□□□□ -1.02
GABPB1-211ENST00000561010 FBXO28Q9NVF7 368 aa8.71□□□□□ -1.02
GABPB1-211ENST00000561010 PCDHB15Q9Y5E8 787 aa8.71□□□□□ -1.02
GABPB1-211ENST00000561010 SLC4A4Q9Y6R1 1079 aa8.71□□□□□ -1.02
GABPB1-211ENST00000561010 LRRC37A2A6NM11 1700 aa8.71□□□□□ -1.02
GABPB1-211ENST00000561010 IGSF3O75054 1194 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 COBLO75128 1261 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 FLOT1O75955 427 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 COL6A1P12109 1028 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 ERCC3P19447 782 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 ADORA2AP29274 412 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 CCNA1P78396 465 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 ICA1Q05084 483 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 COG2Q14746 738 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 GJC2Q5T442 439 aaPredicted RBP8.7□□□□□ -1.02
GABPB1-211ENST00000561010 C12orf60Q5U649 245 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 MFSD14CQ5VZR4 134 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 CTR9Q6PD62 1173 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 LBX2Q6XYB7 198 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 TMEM179Q6ZVK1 233 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 Q7L0L9 218 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 NCAPG2Q86XI2 1143 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 ZNF516Q92618 1163 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 NUP88Q99567 741 aaPredicted RBP8.7□□□□□ -1.02
GABPB1-211ENST00000561010 LRRCC1Q9C099 1032 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 SENP6Q9GZR1 1112 aaPredicted RBP8.7□□□□□ -1.02
GABPB1-211ENST00000561010 SPATC1LQ9H0A9 340 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 IVNS1ABPQ9Y6Y0 642 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 MYH7BA7E2Y1 1941 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 CUL9Q8IWT3 2517 aa8.7□□□□□ -1.02
GABPB1-211ENST00000561010 LILRB3O75022 631 aa8.69□□□□□ -1.02
GABPB1-211ENST00000561010 GLRX3O76003 335 aaKnown RBP8.69□□□□□ -1.02
GABPB1-211ENST00000561010 CYBAP13498 195 aa8.69□□□□□ -1.02
GABPB1-211ENST00000561010 EEF2P13639 858 aaKnown RBP8.69□□□□□ -1.02
GABPB1-211ENST00000561010 LAPTM4AQ15012 233 aa8.69□□□□□ -1.02
GABPB1-211ENST00000561010 QPCTQ16769 361 aa8.69□□□□□ -1.02
GABPB1-211ENST00000561010 FAM83BQ5T0W9 1011 aa8.69□□□□□ -1.02
GABPB1-211ENST00000561010 PPP1R18Q6NYC8 613 aa8.69□□□□□ -1.02
GABPB1-211ENST00000561010 C16orf86Q6ZW13 317 aa8.69□□□□□ -1.02
GABPB1-211ENST00000561010 DPP9Q86TI2 863 aa8.69□□□□□ -1.02
GABPB1-211ENST00000561010 TRMT44Q8IYL2 757 aaKnown RBP8.69□□□□□ -1.02
GABPB1-211ENST00000561010 OTUD7AQ8TE49 926 aaPredicted RBP8.69□□□□□ -1.02
GABPB1-211ENST00000561010 CHMP4CQ96CF2 233 aa8.69□□□□□ -1.02
GABPB1-211ENST00000561010 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.69□□□□□ -1.02
GABPB1-211ENST00000561010 VCPKMTQ9H867 229 aa8.69□□□□□ -1.02
GABPB1-211ENST00000561010 IL21Q9HBE4 155 aa8.69□□□□□ -1.02
GABPB1-211ENST00000561010 ARHGEF10LQ9HCE6 1279 aa8.69□□□□□ -1.02
GABPB1-211ENST00000561010 ATP8A2Q9NTI2 1148 aa8.69□□□□□ -1.02
GABPB1-211ENST00000561010 SWAP70Q9UH65 585 aa8.69□□□□□ -1.02
GABPB1-211ENST00000561010 DDX20Q9UHI6 824 aaKnown RBP8.69□□□□□ -1.02
GABPB1-211ENST00000561010 TMX2Q9Y320 296 aa8.69□□□□□ -1.02
GABPB1-211ENST00000561010 TRIP12Q14669 1992 aaPredicted RBP8.69□□□□□ -1.02
GABPB1-211ENST00000561010 GSG1L2A8MUP6 293 aa8.68□□□□□ -1.02
GABPB1-211ENST00000561010 MINDY4BA8MYZ0 360 aa8.68□□□□□ -1.02
GABPB1-211ENST00000561010 M0R2C6 588 aa8.68□□□□□ -1.02
GABPB1-211ENST00000561010 NRG2O14511 850 aaPredicted RBP8.68□□□□□ -1.02
GABPB1-211ENST00000561010 PGK2P07205 417 aa8.68□□□□□ -1.02
GABPB1-211ENST00000561010 TMEM132BQ14DG7 1078 aa8.68□□□□□ -1.02
GABPB1-211ENST00000561010 UBE3CQ15386 1083 aa8.68□□□□□ -1.02
GABPB1-211ENST00000561010 OSBP2Q969R2 916 aa8.68□□□□□ -1.02
GABPB1-211ENST00000561010 LENG1Q96BZ8 264 aaPredicted RBP8.68□□□□□ -1.02
GABPB1-211ENST00000561010 UBE2OQ9C0C9 1292 aaKnown RBP8.68□□□□□ -1.02
GABPB1-211ENST00000561010 EPB41L4AQ9HCS5 686 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms