RNA–Protein interactions for RNA: ENST00000560997.1

SNX22-206, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 3,367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-206ENST00000560997 TMEM47Q9BQJ4 181 aa11.02□□□□□ -0.65
SNX22-206ENST00000560997 ROBO3Q96MS0 1386 aa11.01□□□□□ -0.65
SNX22-206ENST00000560997 PES1O00541 588 aaKnown RBP11.01□□□□□ -0.65
SNX22-206ENST00000560997 POLR3GO15318 223 aaPredicted RBP11.01□□□□□ -0.65
SNX22-206ENST00000560997 KIF4BQ2VIQ3 1234 aa11.01□□□□□ -0.65
SNX22-206ENST00000560997 ANKRD20A12PQ8NF67 263 aa11.01□□□□□ -0.65
SNX22-206ENST00000560997 BARHL2Q9NY43 387 aa11.01□□□□□ -0.65
SNX22-206ENST00000560997 CDC23Q9UJX2 597 aa11.01□□□□□ -0.65
SNX22-206ENST00000560997 TTF2Q9UNY4 1162 aaKnown RBP11.01□□□□□ -0.65
SNX22-206ENST00000560997 NAV1Q8NEY1 1877 aa11.01□□□□□ -0.65
SNX22-206ENST00000560997 TTC26A0AVF1 554 aa11.01□□□□□ -0.65
SNX22-206ENST00000560997 RASA1P20936 1047 aa11.01□□□□□ -0.65
SNX22-206ENST00000560997 UBA7P41226 1012 aa11.01□□□□□ -0.65
SNX22-206ENST00000560997 CYP26C1Q6V0L0 522 aa11.01□□□□□ -0.65
SNX22-206ENST00000560997 ARHGEF1Q92888 912 aaKnown RBP11.01□□□□□ -0.65
SNX22-206ENST00000560997 TRIM10Q9UDY6 481 aa11.01□□□□□ -0.65
SNX22-206ENST00000560997 ZNF444Q8N0Y2 327 aaPredicted RBP11□□□□□ -0.65
SNX22-206ENST00000560997 ANKZF1Q9H8Y5 726 aa11□□□□□ -0.65
SNX22-206ENST00000560997 REXO2Q9Y3B8 237 aaKnown RBP11□□□□□ -0.65
SNX22-206ENST00000560997 MYH1P12882 1939 aa11□□□□□ -0.65
SNX22-206ENST00000560997 CTAGE9A4FU28 777 aa11□□□□□ -0.65
SNX22-206ENST00000560997 PALM3A6NDB9 673 aaPredicted RBP11□□□□□ -0.65
SNX22-206ENST00000560997 ERICH4A6NGS2 130 aa11□□□□□ -0.65
SNX22-206ENST00000560997 H7C1D1 291 aa11□□□□□ -0.65
SNX22-206ENST00000560997 RC3H1Q5TC82 1133 aaKnown RBP11□□□□□ -0.65
SNX22-206ENST00000560997 DAGLBQ8NCG7 672 aa11□□□□□ -0.65
SNX22-206ENST00000560997 WDR66Q8TBY9 1149 aa11□□□□□ -0.65
SNX22-206ENST00000560997 ARFGAP3Q9NP61 516 aa11□□□□□ -0.65
SNX22-206ENST00000560997 ZCCHC17Q9NP64 241 aaKnown RBP11□□□□□ -0.65
SNX22-206ENST00000560997 KBTBD4Q9NVX7 518 aa11□□□□□ -0.65
SNX22-206ENST00000560997 GNAQP50148 359 aa11□□□□□ -0.65
SNX22-206ENST00000560997 TRIM14Q14142 442 aa11□□□□□ -0.65
SNX22-206ENST00000560997 MB21D1Q8N884 522 aa11□□□□□ -0.65
SNX22-206ENST00000560997 CCDC148Q8NFR7 591 aa11□□□□□ -0.65
SNX22-206ENST00000560997 TRIM47Q96LD4 638 aa11□□□□□ -0.65
SNX22-206ENST00000560997 UBXN6Q9BZV1 441 aa11□□□□□ -0.65
SNX22-206ENST00000560997 TFR2Q9UP52 801 aa11□□□□□ -0.65
SNX22-206ENST00000560997 FLT1P17948 1338 aa11□□□□□ -0.65
SNX22-206ENST00000560997 SNED1Q8TER0 1413 aa11□□□□□ -0.65
SNX22-206ENST00000560997 LGALS16A8MUM7 142 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 KLRF2D3W0D1 207 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 RGL2O15211 777 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 PLCG1P19174 1290 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 TXNRD1Q16881 649 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 ZBTB9Q96C00 473 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 PNKPQ96T60 521 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 FUT8Q9BYC5 575 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 CCSER1Q9C0I3 900 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 RTCBQ9Y3I0 505 aaKnown RBP10.99□□□□□ -0.65
SNX22-206ENST00000560997 RHOBTB3O94955 611 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 KCNB1Q14721 858 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 LONRF2Q1L5Z9 754 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 LETM2Q2VYF4 491 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 TTI2Q6NXR4 508 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 USP17L2Q6R6M4 530 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 ZNF507Q8TCN5 953 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 NAPGQ99747 312 aaPredicted RBP10.99□□□□□ -0.65
SNX22-206ENST00000560997 RTFDC1Q9BY42 306 aaPredicted RBP10.99□□□□□ -0.65
SNX22-206ENST00000560997 TCP11L1Q9NUJ3 509 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 CCNL1Q9UK58 526 aaPredicted RBP10.99□□□□□ -0.65
SNX22-206ENST00000560997 BTAF1O14981 1849 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 CDK5RAP2Q96SN8 1893 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 BAG3O95817 575 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 OAS2P29728 719 aaKnown RBP10.99□□□□□ -0.65
SNX22-206ENST00000560997 NAPAP54920 295 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 GRAPQ13588 217 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 AMOTL1Q8IY63 956 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 CEP112Q8N8E3 955 aa10.99□□□□□ -0.65
SNX22-206ENST00000560997 GIMAP8Q8ND71 665 aaPredicted RBP10.99□□□□□ -0.65
SNX22-206ENST00000560997 GRAPLQ8TC17 118 aaPredicted RBP10.99□□□□□ -0.65
SNX22-206ENST00000560997 ZNF219Q9P2Y4 722 aaPredicted RBP10.99□□□□□ -0.65
SNX22-206ENST00000560997 B4DLN1 442 aa10.98□□□□□ -0.65
SNX22-206ENST00000560997 NKRFO15226 690 aaKnown RBP eCLIP10.98□□□□□ -0.65
SNX22-206ENST00000560997 ATP8B1O43520 1251 aa10.98□□□□□ -0.65
SNX22-206ENST00000560997 CCNT1O60563 726 aaKnown RBP10.98□□□□□ -0.65
SNX22-206ENST00000560997 NDUFA10O95299 355 aa10.98□□□□□ -0.65
SNX22-206ENST00000560997 BTDP43251 543 aa10.98□□□□□ -0.65
SNX22-206ENST00000560997 KLK7P49862 253 aa10.98□□□□□ -0.65
SNX22-206ENST00000560997 PPP4CP60510 307 aa10.98□□□□□ -0.65
SNX22-206ENST00000560997 CABP7Q86V35 215 aa10.98□□□□□ -0.65
SNX22-206ENST00000560997 DUSP9Q99956 384 aaKnown RBP10.98□□□□□ -0.65
SNX22-206ENST00000560997 GUCA1BQ9UMX6 200 aa10.98□□□□□ -0.65
SNX22-206ENST00000560997 EPN1Q9Y6I3 576 aaPredicted RBP10.98□□□□□ -0.65
SNX22-206ENST00000560997 DDX60LQ5H9U9 1706 aaKnown RBP10.98□□□□□ -0.65
SNX22-206ENST00000560997 PSMA7O14818 248 aa10.98□□□□□ -0.65
SNX22-206ENST00000560997 CDK8P49336 464 aa10.98□□□□□ -0.65
SNX22-206ENST00000560997 SMC1AQ14683 1233 aaKnown RBP10.98□□□□□ -0.65
SNX22-206ENST00000560997 CCDC178Q5BJE1 867 aa10.98□□□□□ -0.65
SNX22-206ENST00000560997 WDR59Q6PJI9 974 aa10.98□□□□□ -0.65
SNX22-206ENST00000560997 ZMYND12Q9H0C1 365 aa10.98□□□□□ -0.65
SNX22-206ENST00000560997 VAT1LQ9HCJ6 419 aa10.98□□□□□ -0.65
SNX22-206ENST00000560997 CCDC151A5D8V7 595 aa10.97□□□□□ -0.65
SNX22-206ENST00000560997 OR52Z1P0C646 297 aa10.97□□□□□ -0.65
SNX22-206ENST00000560997 RHOXF2BP0C7M4 288 aa10.97□□□□□ -0.65
SNX22-206ENST00000560997 FCER1AP12319 257 aa10.97□□□□□ -0.65
SNX22-206ENST00000560997 GSTO1P78417 241 aa10.97□□□□□ -0.65
SNX22-206ENST00000560997 GALNT17Q6IS24 598 aa10.97□□□□□ -0.65
SNX22-206ENST00000560997 TMED8Q6PL24 325 aaPredicted RBP10.97□□□□□ -0.65
SNX22-206ENST00000560997 OR8K1Q8NGG5 319 aa10.97□□□□□ -0.65
SNX22-206ENST00000560997 HPS3Q969F9 1004 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms