RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 PRKAG3Q9UGI9 489 aa11.61□□□□□ -0.55
HERC1-210ENST00000560897 MTUS1Q9ULD2 1270 aa11.61□□□□□ -0.55
HERC1-210ENST00000560897 CFAP54Q96N23 3096 aa11.61□□□□□ -0.55
HERC1-210ENST00000560897 MCM3APO60318 1980 aa11.61□□□□□ -0.55
HERC1-210ENST00000560897 PTPRZ1P23471 2315 aaPredicted RBP11.6□□□□□ -0.55
HERC1-210ENST00000560897 RAD21O60216 631 aa11.6□□□□□ -0.55
HERC1-210ENST00000560897 ARHGEF15O94989 841 aa11.6□□□□□ -0.55
HERC1-210ENST00000560897 ICA1Q05084 483 aa11.6□□□□□ -0.55
HERC1-210ENST00000560897 EP400NLQ6ZTU2 488 aa11.6□□□□□ -0.55
HERC1-210ENST00000560897 TMEM179Q6ZVK1 233 aa11.6□□□□□ -0.55
HERC1-210ENST00000560897 ERMP1Q7Z2K6 904 aa11.6□□□□□ -0.55
HERC1-210ENST00000560897 ZNF467Q7Z7K2 595 aaPredicted RBP11.6□□□□□ -0.55
HERC1-210ENST00000560897 MIGA1Q8NAN2 632 aa11.6□□□□□ -0.55
HERC1-210ENST00000560897 AP5M1Q9H0R1 490 aa11.6□□□□□ -0.55
HERC1-210ENST00000560897 IRF2BPLQ9H1B7 796 aa11.6□□□□□ -0.55
HERC1-210ENST00000560897 VCPKMTQ9H867 229 aa11.6□□□□□ -0.55
HERC1-210ENST00000560897 CTDP1Q9Y5B0 961 aaPredicted RBP11.6□□□□□ -0.55
HERC1-210ENST00000560897 SCN5AQ14524 2016 aa11.6□□□□□ -0.55
HERC1-210ENST00000560897 MYH8P13535 1937 aa11.6□□□□□ -0.55
HERC1-210ENST00000560897 VWA5AO00534 786 aa11.59□□□□□ -0.55
HERC1-210ENST00000560897 ADCY6O43306 1168 aa11.59□□□□□ -0.55
HERC1-210ENST00000560897 SLC4A3P48751 1232 aa11.59□□□□□ -0.55
HERC1-210ENST00000560897 TNFAIP2Q03169 654 aa11.59□□□□□ -0.55
HERC1-210ENST00000560897 ZP2Q05996 745 aa11.59□□□□□ -0.55
HERC1-210ENST00000560897 FSCN1Q16658 493 aaKnown RBP11.59□□□□□ -0.55
HERC1-210ENST00000560897 CCDC158Q5M9N0 1113 aa11.59□□□□□ -0.55
HERC1-210ENST00000560897 ARMCX2Q7L311 632 aa11.59□□□□□ -0.55
HERC1-210ENST00000560897 TLK2Q86UE8 772 aa11.59□□□□□ -0.55
HERC1-210ENST00000560897 RETREG2Q8NC44 543 aa11.59□□□□□ -0.55
HERC1-210ENST00000560897 ANKS1AQ92625 1134 aa11.59□□□□□ -0.55
HERC1-210ENST00000560897 AGBL1Q96MI9 1066 aa11.59□□□□□ -0.55
HERC1-210ENST00000560897 POP1Q99575 1024 aaKnown RBP11.59□□□□□ -0.55
HERC1-210ENST00000560897 TEX13BQ9BXU2 312 aa11.59□□□□□ -0.55
HERC1-210ENST00000560897 NAV1Q8NEY1 1877 aa11.58□□□□□ -0.56
HERC1-210ENST00000560897 H3BQ06 376 aaPredicted RBP11.58□□□□□ -0.56
HERC1-210ENST00000560897 SRGAP3O43295 1099 aa11.58□□□□□ -0.56
HERC1-210ENST00000560897 BAIAP3O94812 1187 aa11.58□□□□□ -0.56
HERC1-210ENST00000560897 PLCD1P51178 756 aa11.58□□□□□ -0.56
HERC1-210ENST00000560897 KIAA1755Q5JYT7 1200 aa11.58□□□□□ -0.56
HERC1-210ENST00000560897 SNRNP48Q6IEG0 339 aaKnown RBP11.58□□□□□ -0.56
HERC1-210ENST00000560897 ADHFE1Q8IWW8 467 aa11.58□□□□□ -0.56
HERC1-210ENST00000560897 ANKRD35Q8N283 1001 aa11.58□□□□□ -0.56
HERC1-210ENST00000560897 MAGEB6Q8N7X4 407 aa11.58□□□□□ -0.56
HERC1-210ENST00000560897 TGS1Q96RS0 853 aaKnown RBP11.58□□□□□ -0.56
HERC1-210ENST00000560897 ALDH8A1Q9H2A2 487 aaPredicted RBP11.58□□□□□ -0.56
HERC1-210ENST00000560897 CTNNA3Q9UI47 895 aa11.58□□□□□ -0.56
HERC1-210ENST00000560897 PPP1R9AQ9ULJ8 1098 aa11.58□□□□□ -0.56
HERC1-210ENST00000560897 ADAMTS5Q9UNA0 930 aa11.58□□□□□ -0.56
HERC1-210ENST00000560897 TMX2Q9Y320 296 aa11.58□□□□□ -0.56
HERC1-210ENST00000560897 SPTBN4Q9H254 2564 aa11.58□□□□□ -0.56
HERC1-210ENST00000560897 MYO5AQ9Y4I1 1855 aaKnown RBP11.57□□□□□ -0.56
HERC1-210ENST00000560897 CTAGE5O15320 804 aa11.57□□□□□ -0.56
HERC1-210ENST00000560897 IDH1O75874 414 aaKnown RBP11.57□□□□□ -0.56
HERC1-210ENST00000560897 CYP2C9P11712 490 aa11.57□□□□□ -0.56
HERC1-210ENST00000560897 PSMC6P62333 389 aa11.57□□□□□ -0.56
HERC1-210ENST00000560897 NKX3-2P78367 333 aa11.57□□□□□ -0.56
HERC1-210ENST00000560897 PTPROQ16827 1216 aa11.57□□□□□ -0.56
HERC1-210ENST00000560897 TIGD5Q53EQ6 642 aa11.57□□□□□ -0.56
HERC1-210ENST00000560897 SPRED2Q7Z698 418 aa11.57□□□□□ -0.56
HERC1-210ENST00000560897 NEK9Q8TD19 979 aa11.57□□□□□ -0.56
HERC1-210ENST00000560897 ATOH1Q92858 354 aaPredicted RBP11.57□□□□□ -0.56
HERC1-210ENST00000560897 PBXIP1Q96AQ6 731 aa11.57□□□□□ -0.56
HERC1-210ENST00000560897 SUGCTQ9HAC7 445 aa11.57□□□□□ -0.56
HERC1-210ENST00000560897 GOPCQ9HD26 462 aa11.57□□□□□ -0.56
HERC1-210ENST00000560897 TRMT13Q9NUP7 481 aaKnown RBP11.57□□□□□ -0.56
HERC1-210ENST00000560897 FBXO28Q9NVF7 368 aa11.57□□□□□ -0.56
HERC1-210ENST00000560897 FAM86C1Q9NVL1 165 aa11.57□□□□□ -0.56
HERC1-210ENST00000560897 MUTYHQ9UIF7 546 aa11.57□□□□□ -0.56
HERC1-210ENST00000560897 ZNF214Q9UL59 606 aaPredicted RBP11.57□□□□□ -0.56
HERC1-210ENST00000560897 TNKSO95271 1327 aa11.57□□□□□ -0.56
HERC1-210ENST00000560897 SIP14410 1827 aa11.56□□□□□ -0.56
HERC1-210ENST00000560897 LCHNA4D1U4 455 aa11.56□□□□□ -0.56
HERC1-210ENST00000560897 CYP2E1P05181 493 aaPredicted RBP11.56□□□□□ -0.56
HERC1-210ENST00000560897 TCF15Q12870 199 aa11.56□□□□□ -0.56
HERC1-210ENST00000560897 G3BP1Q13283 466 aaKnown RBP eCLIP11.56□□□□□ -0.56
HERC1-210ENST00000560897 CCDC144CPQ8IYA2 1237 aa11.56□□□□□ -0.56
HERC1-210ENST00000560897 VWCEQ96DN2 955 aa11.56□□□□□ -0.56
HERC1-210ENST00000560897 GRIN2DO15399 1336 aa11.56□□□□□ -0.56
HERC1-210ENST00000560897 CACNA1BQ00975 2339 aa11.55□□□□□ -0.56
HERC1-210ENST00000560897 TECTAO75443 2155 aa11.55□□□□□ -0.56
HERC1-210ENST00000560897 TANC1Q9C0D5 1861 aa11.55□□□□□ -0.56
HERC1-210ENST00000560897 DNAJC25-GNG10A0A024R161 153 aa11.55□□□□□ -0.56
HERC1-210ENST00000560897 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.55□□□□□ -0.56
HERC1-210ENST00000560897 C19orf67A6NJJ6 358 aa11.55□□□□□ -0.56
HERC1-210ENST00000560897 DYNC1LI2O43237 492 aaPredicted RBP11.55□□□□□ -0.56
HERC1-210ENST00000560897 IRS1P35568 1242 aa11.55□□□□□ -0.56
HERC1-210ENST00000560897 ERVK-21P61565 698 aa11.55□□□□□ -0.56
HERC1-210ENST00000560897 GABPAQ06546 454 aa11.55□□□□□ -0.56
HERC1-210ENST00000560897 BFSP2Q13515 415 aa11.55□□□□□ -0.56
HERC1-210ENST00000560897 HERC4Q5GLZ8 1057 aaPredicted RBP11.55□□□□□ -0.56
HERC1-210ENST00000560897 FAM47CQ5HY64 1035 aa11.55□□□□□ -0.56
HERC1-210ENST00000560897 IER5LQ5T953 404 aa11.55□□□□□ -0.56
HERC1-210ENST00000560897 BMP8AQ7Z5Y6 402 aa11.55□□□□□ -0.56
HERC1-210ENST00000560897 SLF1Q9BQI6 1058 aa11.55□□□□□ -0.56
HERC1-210ENST00000560897 MCM9Q9NXL9 1143 aa11.55□□□□□ -0.56
HERC1-210ENST00000560897 SWAP70Q9UH65 585 aa11.55□□□□□ -0.56
HERC1-210ENST00000560897 FBXO40Q9UH90 709 aa11.55□□□□□ -0.56
HERC1-210ENST00000560897 NOD1Q9Y239 953 aa11.55□□□□□ -0.56
HERC1-210ENST00000560897 ZFHX2Q9C0A1 2572 aaPredicted RBP11.55□□□□□ -0.56
HERC1-210ENST00000560897 TMEM221A6NGB7 291 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms