RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 UNC80Q8N2C7 3258 aa13.25□□□□□ -0.29
GABPB1-210ENST00000560825 MYADML2A6NDP7 307 aa13.25□□□□□ -0.29
GABPB1-210ENST00000560825 ATP2A1O14983 1001 aa13.25□□□□□ -0.29
GABPB1-210ENST00000560825 ORC4O43929 436 aa13.25□□□□□ -0.29
GABPB1-210ENST00000560825 PGK1P00558 417 aa13.25□□□□□ -0.29
GABPB1-210ENST00000560825 SLC16A2P36021 539 aa13.25□□□□□ -0.29
GABPB1-210ENST00000560825 KCTD2Q14681 263 aa13.25□□□□□ -0.29
GABPB1-210ENST00000560825 LRRC41Q15345 812 aa13.25□□□□□ -0.29
GABPB1-210ENST00000560825 MUM1L1Q5H9M0 696 aa13.25□□□□□ -0.29
GABPB1-210ENST00000560825 GMCL1Q96IK5 515 aa13.25□□□□□ -0.29
GABPB1-210ENST00000560825 ZBTB47Q9UFB7 747 aaPredicted RBP13.25□□□□□ -0.29
GABPB1-210ENST00000560825 FEM1BQ9UK73 627 aa13.25□□□□□ -0.29
GABPB1-210ENST00000560825 MYH6P13533 1939 aa13.25□□□□□ -0.29
GABPB1-210ENST00000560825 FRMPD2Q68DX3 1309 aaPredicted RBP13.25□□□□□ -0.29
GABPB1-210ENST00000560825 RBAK-RBAKDNI3L0D1 243 aa13.24□□□□□ -0.29
GABPB1-210ENST00000560825 DNM1LO00429 736 aa13.24□□□□□ -0.29
GABPB1-210ENST00000560825 MDM2Q00987 491 aaPredicted RBP13.24□□□□□ -0.29
GABPB1-210ENST00000560825 CCDC174Q6PII3 467 aa13.24□□□□□ -0.29
GABPB1-210ENST00000560825 TMEM47Q9BQJ4 181 aa13.24□□□□□ -0.29
GABPB1-210ENST00000560825 CPVLQ9H3G5 476 aa13.24□□□□□ -0.29
GABPB1-210ENST00000560825 PRR12Q9ULL5 1215 aa13.24□□□□□ -0.29
GABPB1-210ENST00000560825 SOWAHBA6NEL2 793 aa13.23□□□□□ -0.29
GABPB1-210ENST00000560825 ADCYAP1R1P41586 468 aa13.23□□□□□ -0.29
GABPB1-210ENST00000560825 SLC1A4P43007 532 aa13.23□□□□□ -0.29
GABPB1-210ENST00000560825 SH3RF1Q7Z6J0 888 aa13.23□□□□□ -0.29
GABPB1-210ENST00000560825 KATNBL1Q9H079 304 aa13.23□□□□□ -0.29
GABPB1-210ENST00000560825 ZNF287Q9HBT7 754 aa13.23□□□□□ -0.29
GABPB1-210ENST00000560825 TOMM22Q9NS69 142 aa13.23□□□□□ -0.29
GABPB1-210ENST00000560825 ISY1Q9ULR0 285 aaKnown RBP13.23□□□□□ -0.29
GABPB1-210ENST00000560825 TAF6LQ9Y6J9 622 aa13.23□□□□□ -0.29
GABPB1-210ENST00000560825 ZMYM6O95789 1325 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.22□□□□□ -0.29
GABPB1-210ENST00000560825 ZBED4O75132 1171 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 ADAMTS4O75173 837 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 SLC3A2P08195 630 aaKnown RBP13.22□□□□□ -0.29
GABPB1-210ENST00000560825 ITGB8P26012 769 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 STAT2P52630 851 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 RTP1P59025 263 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 SLC39A5Q6ZMH5 540 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 STAG1Q8WVM7 1258 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 GPCPD1Q9NPB8 672 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 A1CFQ9NQ94 594 aaKnown RBP13.22□□□□□ -0.29
GABPB1-210ENST00000560825 REV3LO60673 3130 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 SYNRGQ9UMZ2 1314 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 ALAS1P13196 640 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 CAPN2P17655 700 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 AAMPQ13685 434 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 TRIM60Q495X7 471 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 AKNAD1Q5T1N1 836 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 MAMDC4Q6UXC1 1216 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.22□□□□□ -0.29
GABPB1-210ENST00000560825 CCDC144CPQ8IYA2 1237 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 ANKRD35Q8N283 1001 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 DDX11Q96FC9 970 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 XPNPEP3Q9NQH7 507 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 RNF146Q9NTX7 359 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 SYNPO2Q9UMS6 1093 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 ATP11BQ9Y2G3 1177 aa13.22□□□□□ -0.29
GABPB1-210ENST00000560825 DIS3Q9Y2L1 958 aaKnown RBP13.22□□□□□ -0.29
GABPB1-210ENST00000560825 CHD9Q3L8U1 2897 aa13.21□□□□□ -0.29
GABPB1-210ENST00000560825 CTAGE5O15320 804 aa13.21□□□□□ -0.3
GABPB1-210ENST00000560825 MSCO60682 206 aa13.21□□□□□ -0.3
GABPB1-210ENST00000560825 GOLGA8HP0CJ92 632 aa13.21□□□□□ -0.3
GABPB1-210ENST00000560825 PDHBP11177 359 aa13.21□□□□□ -0.3
GABPB1-210ENST00000560825 IKQ13123 557 aaPredicted RBP13.21□□□□□ -0.3
GABPB1-210ENST00000560825 COL9A3Q14050 684 aaPredicted RBP13.21□□□□□ -0.3
GABPB1-210ENST00000560825 CCDC96Q2M329 555 aa13.21□□□□□ -0.3
GABPB1-210ENST00000560825 FAM133AQ8N9E0 248 aa13.21□□□□□ -0.3
GABPB1-210ENST00000560825 TRERF1Q96PN7 1200 aa13.21□□□□□ -0.3
GABPB1-210ENST00000560825 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.21□□□□□ -0.3
GABPB1-210ENST00000560825 ZHX1Q9UKY1 873 aaPredicted RBP13.21□□□□□ -0.3
GABPB1-210ENST00000560825 TRIM43BA6NCK2 446 aa13.2□□□□□ -0.3
GABPB1-210ENST00000560825 B4E1Z4 1266 aa13.2□□□□□ -0.3
GABPB1-210ENST00000560825 NFIBO00712 420 aa13.2□□□□□ -0.3
GABPB1-210ENST00000560825 BMP8BP34820 402 aa13.2□□□□□ -0.3
GABPB1-210ENST00000560825 SNX17Q15036 470 aa13.2□□□□□ -0.3
GABPB1-210ENST00000560825 TTC22Q5TAA0 569 aa13.2□□□□□ -0.3
GABPB1-210ENST00000560825 CCSAPQ6IQ19 270 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-210ENST00000560825 ARMCX2Q7L311 632 aa13.2□□□□□ -0.3
GABPB1-210ENST00000560825 TRIM43Q96BQ3 446 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-210ENST00000560825 RANBP17Q9H2T7 1088 aaKnown RBP13.2□□□□□ -0.3
GABPB1-210ENST00000560825 PDGFCQ9NRA1 345 aa13.2□□□□□ -0.3
GABPB1-210ENST00000560825 TCP11L1Q9NUJ3 509 aa13.2□□□□□ -0.3
GABPB1-210ENST00000560825 SLC5A4Q9NY91 659 aa13.2□□□□□ -0.3
GABPB1-210ENST00000560825 PRUNE2Q8WUY3 3088 aa13.2□□□□□ -0.3
GABPB1-210ENST00000560825 SYNGAP1Q96PV0 1343 aa13.19□□□□□ -0.3
GABPB1-210ENST00000560825 A0A1W2PQ45 241 aaPredicted RBP13.19□□□□□ -0.3
GABPB1-210ENST00000560825 A0A1W2PQY0 241 aa13.19□□□□□ -0.3
GABPB1-210ENST00000560825 PLA2G6O60733 806 aa13.19□□□□□ -0.3
GABPB1-210ENST00000560825 KDM4AO75164 1064 aa13.19□□□□□ -0.3
GABPB1-210ENST00000560825 TOP1P11387 765 aaKnown RBP13.19□□□□□ -0.3
GABPB1-210ENST00000560825 OAZ1P54368 228 aa13.19□□□□□ -0.3
GABPB1-210ENST00000560825 PTH1RQ03431 593 aa13.19□□□□□ -0.3
GABPB1-210ENST00000560825 ACVR2BQ13705 512 aa13.19□□□□□ -0.3
GABPB1-210ENST00000560825 CCDC144BQ3MJ40 725 aa13.19□□□□□ -0.3
GABPB1-210ENST00000560825 BTNL9Q6UXG8 535 aa13.19□□□□□ -0.3
GABPB1-210ENST00000560825 MFSD6Q6ZSS7 791 aa13.19□□□□□ -0.3
GABPB1-210ENST00000560825 Q7L0L9 218 aa13.19□□□□□ -0.3
GABPB1-210ENST00000560825 FAM160B2Q86V87 743 aa13.19□□□□□ -0.3
GABPB1-210ENST00000560825 CHST13Q8NET6 341 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms