RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 BEX3Q00994 111 aa11.96□□□□□ -0.49
TPM1-225ENST00000560679 GNASQ5JWF2 1037 aa11.96□□□□□ -0.49
TPM1-225ENST00000560679 C16orf86Q6ZW13 317 aa11.96□□□□□ -0.49
TPM1-225ENST00000560679 KHSRPQ92945 711 aaKnown RBP eCLIP11.96□□□□□ -0.49
TPM1-225ENST00000560679 CCDC17Q96LX7 622 aa11.96□□□□□ -0.49
TPM1-225ENST00000560679 SLF1Q9BQI6 1058 aa11.96□□□□□ -0.49
TPM1-225ENST00000560679 NOC4LQ9BVI4 516 aaKnown RBP11.96□□□□□ -0.49
TPM1-225ENST00000560679 HIPK3Q9H422 1215 aa11.96□□□□□ -0.49
TPM1-225ENST00000560679 C11orf16Q9NQ32 467 aa11.96□□□□□ -0.49
TPM1-225ENST00000560679 MUC6Q6W4X9 2439 aa11.96□□□□□ -0.5
TPM1-225ENST00000560679 ZBED9Q6R2W3 1325 aa11.95□□□□□ -0.5
TPM1-225ENST00000560679 GOLIM4O00461 696 aa11.95□□□□□ -0.5
TPM1-225ENST00000560679 MBD4O95243 580 aa11.95□□□□□ -0.5
TPM1-225ENST00000560679 FGBP02675 491 aa11.95□□□□□ -0.5
TPM1-225ENST00000560679 CHGBP05060 677 aa11.95□□□□□ -0.5
TPM1-225ENST00000560679 CCL23P55773 120 aa11.95□□□□□ -0.5
TPM1-225ENST00000560679 C12orf60Q5U649 245 aa11.95□□□□□ -0.5
TPM1-225ENST00000560679 KRT40Q6A162 431 aa11.95□□□□□ -0.5
TPM1-225ENST00000560679 ARMCX2Q7L311 632 aa11.95□□□□□ -0.5
TPM1-225ENST00000560679 VTI1AQ96AJ9 217 aa11.95□□□□□ -0.5
TPM1-225ENST00000560679 DDX11Q96FC9 970 aa11.95□□□□□ -0.5
TPM1-225ENST00000560679 TSPYL2Q9H2G4 693 aaPredicted RBP11.95□□□□□ -0.5
TPM1-225ENST00000560679 MTIF3Q9H2K0 278 aaKnown RBP11.95□□□□□ -0.5
TPM1-225ENST00000560679 ABHD16BQ9H3Z7 469 aa11.95□□□□□ -0.5
TPM1-225ENST00000560679 KANSL2Q9H9L4 492 aa11.95□□□□□ -0.5
TPM1-225ENST00000560679 GOPCQ9HD26 462 aa11.95□□□□□ -0.5
TPM1-225ENST00000560679 EXOC6BQ9Y2D4 811 aa11.95□□□□□ -0.5
TPM1-225ENST00000560679 MTCH2Q9Y6C9 303 aa11.95□□□□□ -0.5
TPM1-225ENST00000560679 LCTP09848 1927 aa11.94□□□□□ -0.5
TPM1-225ENST00000560679 MYH7P12883 1935 aa11.94□□□□□ -0.5
TPM1-225ENST00000560679 RFXAPO00287 272 aa11.94□□□□□ -0.5
TPM1-225ENST00000560679 ATP2A1O14983 1001 aa11.94□□□□□ -0.5
TPM1-225ENST00000560679 B4GALT4O60513 344 aa11.94□□□□□ -0.5
TPM1-225ENST00000560679 TTF1Q15361 905 aaPredicted RBP11.94□□□□□ -0.5
TPM1-225ENST00000560679 CEP85Q6P2H3 762 aa11.94□□□□□ -0.5
TPM1-225ENST00000560679 CXCL17Q6UXB2 119 aa11.94□□□□□ -0.5
TPM1-225ENST00000560679 CCDC144CPQ8IYA2 1237 aa11.94□□□□□ -0.5
TPM1-225ENST00000560679 TRPV6Q9H1D0 765 aa11.94□□□□□ -0.5
TPM1-225ENST00000560679 SPC25Q9HBM1 224 aa11.94□□□□□ -0.5
TPM1-225ENST00000560679 HCN4Q9Y3Q4 1203 aa11.94□□□□□ -0.5
TPM1-225ENST00000560679 PCDHA11Q9Y5I1 949 aa11.94□□□□□ -0.5
TPM1-225ENST00000560679 SCN5AQ14524 2016 aa11.94□□□□□ -0.5
TPM1-225ENST00000560679 TANC1Q9C0D5 1861 aa11.93□□□□□ -0.5
TPM1-225ENST00000560679 USP17L12C9JPN9 530 aa11.93□□□□□ -0.5
TPM1-225ENST00000560679 USP17L21D6R901 530 aa11.93□□□□□ -0.5
TPM1-225ENST00000560679 RAD21O60216 631 aa11.93□□□□□ -0.5
TPM1-225ENST00000560679 ARHGEF15O94989 841 aa11.93□□□□□ -0.5
TPM1-225ENST00000560679 NDUFB10O96000 172 aa11.93□□□□□ -0.5
TPM1-225ENST00000560679 CA3P07451 260 aa11.93□□□□□ -0.5
TPM1-225ENST00000560679 RLBP1P12271 317 aa11.93□□□□□ -0.5
TPM1-225ENST00000560679 POU3F3P20264 500 aaPredicted RBP11.93□□□□□ -0.5
TPM1-225ENST00000560679 ADD2P35612 726 aa11.93□□□□□ -0.5
TPM1-225ENST00000560679 CNTN2Q02246 1040 aa11.93□□□□□ -0.5
TPM1-225ENST00000560679 SKIV2LQ15477 1246 aaKnown RBP11.93□□□□□ -0.5
TPM1-225ENST00000560679 AAK1Q2M2I8 961 aa11.93□□□□□ -0.5
TPM1-225ENST00000560679 SCLYQ96I15 445 aa11.93□□□□□ -0.5
TPM1-225ENST00000560679 AGBL1Q96MI9 1066 aa11.93□□□□□ -0.5
TPM1-225ENST00000560679 DNAJC2Q99543 621 aaKnown RBP11.93□□□□□ -0.5
TPM1-225ENST00000560679 IL1RAPL2Q9NP60 686 aa11.93□□□□□ -0.5
TPM1-225ENST00000560679 ATP8A2Q9NTI2 1148 aa11.93□□□□□ -0.5
TPM1-225ENST00000560679 GNEQ9Y223 722 aaKnown RBP11.93□□□□□ -0.5
TPM1-225ENST00000560679 SLC4A7Q9Y6M7 1214 aa11.93□□□□□ -0.5
TPM1-225ENST00000560679 PTPRSQ13332 1948 aa11.93□□□□□ -0.5
TPM1-225ENST00000560679 MYH4Q9Y623 1939 aa11.93□□□□□ -0.5
TPM1-225ENST00000560679 BRWD1Q9NSI6 2320 aa11.92□□□□□ -0.5
TPM1-225ENST00000560679 FAM86C2PA6NEL3 165 aa11.92□□□□□ -0.5
TPM1-225ENST00000560679 TLL1O43897 1013 aa11.92□□□□□ -0.5
TPM1-225ENST00000560679 ATP2A2P16615 1042 aaKnown RBP11.92□□□□□ -0.5
TPM1-225ENST00000560679 ITGA7Q13683 1181 aa11.92□□□□□ -0.5
TPM1-225ENST00000560679 TTLL4Q14679 1199 aa11.92□□□□□ -0.5
TPM1-225ENST00000560679 TMEM31Q5JXX7 168 aa11.92□□□□□ -0.5
TPM1-225ENST00000560679 ZKSCAN2Q63HK3 967 aa11.92□□□□□ -0.5
TPM1-225ENST00000560679 TLK2Q86UE8 772 aa11.92□□□□□ -0.5
TPM1-225ENST00000560679 CPXCR1Q8N123 301 aa11.92□□□□□ -0.5
TPM1-225ENST00000560679 CERS4Q9HA82 394 aa11.92□□□□□ -0.5
TPM1-225ENST00000560679 SLC38A10Q9HBR0 1119 aa11.92□□□□□ -0.5
TPM1-225ENST00000560679 RAVER2Q9HCJ3 691 aaKnown RBP11.92□□□□□ -0.5
TPM1-225ENST00000560679 DDX49Q9Y6V7 483 aaKnown RBP11.92□□□□□ -0.5
TPM1-225ENST00000560679 ZBBXA8MT70 800 aa11.91□□□□□ -0.5
TPM1-225ENST00000560679 F5H6K3 240 aa11.91□□□□□ -0.5
TPM1-225ENST00000560679 SLC4A3P48751 1232 aa11.91□□□□□ -0.5
TPM1-225ENST00000560679 PSMC6P62333 389 aa11.91□□□□□ -0.5
TPM1-225ENST00000560679 TNFAIP2Q03169 654 aa11.91□□□□□ -0.5
TPM1-225ENST00000560679 KLRC3Q07444 240 aa11.91□□□□□ -0.5
TPM1-225ENST00000560679 FSCN1Q16658 493 aaKnown RBP11.91□□□□□ -0.5
TPM1-225ENST00000560679 TMEM63BQ5T3F8 832 aa11.91□□□□□ -0.5
TPM1-225ENST00000560679 CTR9Q6PD62 1173 aa11.91□□□□□ -0.5
TPM1-225ENST00000560679 SPRED2Q7Z698 418 aa11.91□□□□□ -0.5
TPM1-225ENST00000560679 ERC1Q8IUD2 1116 aa11.91□□□□□ -0.5
TPM1-225ENST00000560679 ANKRD35Q8N283 1001 aa11.91□□□□□ -0.5
TPM1-225ENST00000560679 FAM133AQ8N9E0 248 aa11.91□□□□□ -0.5
TPM1-225ENST00000560679 PRPF38AQ8NAV1 312 aaKnown RBP11.91□□□□□ -0.5
TPM1-225ENST00000560679 RHPN1Q8TCX5 695 aa11.91□□□□□ -0.5
TPM1-225ENST00000560679 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.91□□□□□ -0.5
TPM1-225ENST00000560679 WDFY4Q6ZS81 3184 aa11.9□□□□□ -0.5
TPM1-225ENST00000560679 IGKV6D-41A0A0C4DH26 115 aa11.9□□□□□ -0.5
TPM1-225ENST00000560679 SOWAHBA6NEL2 793 aa11.9□□□□□ -0.5
TPM1-225ENST00000560679 CABYRO75952 493 aa11.9□□□□□ -0.5
TPM1-225ENST00000560679 SMPD1P17405 629 aa11.9□□□□□ -0.5
TPM1-225ENST00000560679 RASA1P20936 1047 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms