RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 CDK8P49336 464 aa10.82□□□□□ -0.68
RABGGTA-217ENST00000560521 NKX3-2P78367 333 aa10.82□□□□□ -0.68
RABGGTA-217ENST00000560521 FAM83BQ5T0W9 1011 aa10.82□□□□□ -0.68
RABGGTA-217ENST00000560521 SNRNP48Q6IEG0 339 aaKnown RBP10.82□□□□□ -0.68
RABGGTA-217ENST00000560521 ZNF467Q7Z7K2 595 aaPredicted RBP10.82□□□□□ -0.68
RABGGTA-217ENST00000560521 LCORLQ8N3X6 602 aa10.82□□□□□ -0.68
RABGGTA-217ENST00000560521 NOC4LQ9BVI4 516 aaKnown RBP10.82□□□□□ -0.68
RABGGTA-217ENST00000560521 KATNBL1Q9H079 304 aa10.82□□□□□ -0.68
RABGGTA-217ENST00000560521 CERS4Q9HA82 394 aa10.82□□□□□ -0.68
RABGGTA-217ENST00000560521 SPC25Q9HBM1 224 aa10.82□□□□□ -0.68
RABGGTA-217ENST00000560521 COG5Q9UP83 839 aa10.82□□□□□ -0.68
RABGGTA-217ENST00000560521 ASTN1O14525 1302 aa10.82□□□□□ -0.68
RABGGTA-217ENST00000560521 SCN10AQ9Y5Y9 1956 aa10.81□□□□□ -0.68
RABGGTA-217ENST00000560521 CYP2D7A0A087X1C5 515 aa10.81□□□□□ -0.68
RABGGTA-217ENST00000560521 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.81□□□□□ -0.68
RABGGTA-217ENST00000560521 TCRBV5S4A2TA0A5A2 114 aa10.81□□□□□ -0.68
RABGGTA-217ENST00000560521 FAM86C2PA6NEL3 165 aa10.81□□□□□ -0.68
RABGGTA-217ENST00000560521 PRKAB2O43741 272 aa10.81□□□□□ -0.68
RABGGTA-217ENST00000560521 PDE6AP16499 860 aa10.81□□□□□ -0.68
RABGGTA-217ENST00000560521 SLC9C2Q5TAH2 1124 aa10.81□□□□□ -0.68
RABGGTA-217ENST00000560521 CXCL17Q6UXB2 119 aa10.81□□□□□ -0.68
RABGGTA-217ENST00000560521 ARMCX2Q7L311 632 aa10.81□□□□□ -0.68
RABGGTA-217ENST00000560521 RPUSD2Q8IZ73 545 aaKnown RBP10.81□□□□□ -0.68
RABGGTA-217ENST00000560521 SCLYQ96I15 445 aa10.81□□□□□ -0.68
RABGGTA-217ENST00000560521 CCDC17Q96LX7 622 aa10.81□□□□□ -0.68
RABGGTA-217ENST00000560521 AGBL1Q96MI9 1066 aa10.81□□□□□ -0.68
RABGGTA-217ENST00000560521 TEX13BQ9BXU2 312 aa10.81□□□□□ -0.68
RABGGTA-217ENST00000560521 CD320Q9NPF0 282 aa10.81□□□□□ -0.68
RABGGTA-217ENST00000560521 ZNF532Q9HCE3 1301 aa10.81□□□□□ -0.68
RABGGTA-217ENST00000560521 PIEZO1Q92508 2521 aa10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 ZBBXA8MT70 800 aa10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 PI4K2BG5E9Z4 385 aa10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 GTPBP6O43824 516 aaPredicted RBP10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 RAD21O60216 631 aa10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 B4GALT4O60513 344 aa10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 CA3P07451 260 aa10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 ATP2A2P16615 1042 aaKnown RBP10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 SLC4A3P48751 1232 aa10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 ITGA7Q13683 1181 aa10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 TMEM67Q5HYA8 995 aa10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 C12orf60Q5U649 245 aa10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 CCDC144CPQ8IYA2 1237 aa10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 CLUAP1Q96AJ1 413 aa10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 SLF1Q9BQI6 1058 aa10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 TRPV6Q9H1D0 765 aa10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 C1orf115Q9H7X2 142 aa10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 ARMT1Q9H993 441 aa10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 KANSL2Q9H9L4 492 aa10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 GOPCQ9HD26 462 aa10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 MYH7BA7E2Y1 1941 aa10.8□□□□□ -0.68
RABGGTA-217ENST00000560521 ATP2A1O14983 1001 aa10.79□□□□□ -0.68
RABGGTA-217ENST00000560521 ARHGEF15O94989 841 aa10.79□□□□□ -0.68
RABGGTA-217ENST00000560521 PTGS1P23219 599 aa10.79□□□□□ -0.68
RABGGTA-217ENST00000560521 TTLL4Q14679 1199 aa10.79□□□□□ -0.68
RABGGTA-217ENST00000560521 SLFNL1Q499Z3 407 aa10.79□□□□□ -0.68
RABGGTA-217ENST00000560521 C16orf86Q6ZW13 317 aa10.79□□□□□ -0.68
RABGGTA-217ENST00000560521 CPXCR1Q8N123 301 aa10.79□□□□□ -0.68
RABGGTA-217ENST00000560521 TMEM57Q8N5G2 664 aa10.79□□□□□ -0.68
RABGGTA-217ENST00000560521 HLA-CQ95604 372 aa10.79□□□□□ -0.68
RABGGTA-217ENST00000560521 NUP88Q99567 741 aaPredicted RBP10.79□□□□□ -0.68
RABGGTA-217ENST00000560521 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.79□□□□□ -0.68
RABGGTA-217ENST00000560521 GNEQ9Y223 722 aaKnown RBP10.79□□□□□ -0.68
RABGGTA-217ENST00000560521 NLRC5Q86WI3 1866 aa10.78□□□□□ -0.68
RABGGTA-217ENST00000560521 ATG2AQ2TAZ0 1938 aa10.78□□□□□ -0.68
RABGGTA-217ENST00000560521 USP17L12C9JPN9 530 aa10.78□□□□□ -0.68
RABGGTA-217ENST00000560521 USP17L21D6R901 530 aa10.78□□□□□ -0.68
RABGGTA-217ENST00000560521 IPO8O15397 1037 aaKnown RBP10.78□□□□□ -0.68
RABGGTA-217ENST00000560521 CABYRO75952 493 aa10.78□□□□□ -0.68
RABGGTA-217ENST00000560521 TNFAIP2Q03169 654 aa10.78□□□□□ -0.68
RABGGTA-217ENST00000560521 TTF1Q15361 905 aaPredicted RBP10.78□□□□□ -0.68
RABGGTA-217ENST00000560521 ANKRD35Q8N283 1001 aa10.78□□□□□ -0.68
RABGGTA-217ENST00000560521 PRPF38AQ8NAV1 312 aaKnown RBP10.78□□□□□ -0.68
RABGGTA-217ENST00000560521 FRAT1Q92837 279 aaPredicted RBP10.78□□□□□ -0.68
RABGGTA-217ENST00000560521 RAVER2Q9HCJ3 691 aaKnown RBP10.78□□□□□ -0.68
RABGGTA-217ENST00000560521 ATP8A2Q9NTI2 1148 aa10.78□□□□□ -0.68
RABGGTA-217ENST00000560521 ZNF318Q5VUA4 2279 aa10.78□□□□□ -0.68
RABGGTA-217ENST00000560521 WDFY4Q6ZS81 3184 aa10.77□□□□□ -0.68
RABGGTA-217ENST00000560521 LPXNO60711 386 aa10.77□□□□□ -0.69
RABGGTA-217ENST00000560521 SMPD1P17405 629 aa10.77□□□□□ -0.69
RABGGTA-217ENST00000560521 PSMC6P62333 389 aa10.77□□□□□ -0.69
RABGGTA-217ENST00000560521 CNTN2Q02246 1040 aa10.77□□□□□ -0.69
RABGGTA-217ENST00000560521 TAP1Q03518 808 aa10.77□□□□□ -0.69
RABGGTA-217ENST00000560521 FSCN1Q16658 493 aaKnown RBP10.77□□□□□ -0.69
RABGGTA-217ENST00000560521 TMEM63BQ5T3F8 832 aa10.77□□□□□ -0.69
RABGGTA-217ENST00000560521 SPRED2Q7Z698 418 aa10.77□□□□□ -0.69
RABGGTA-217ENST00000560521 DEFB128Q7Z7B8 93 aa10.77□□□□□ -0.69
RABGGTA-217ENST00000560521 AACSQ86V21 672 aa10.77□□□□□ -0.69
RABGGTA-217ENST00000560521 PIAS4Q8N2W9 510 aaPredicted RBP10.77□□□□□ -0.69
RABGGTA-217ENST00000560521 ARNTL2Q8WYA1 636 aa10.77□□□□□ -0.69
RABGGTA-217ENST00000560521 SEZ6LQ9BYH1 1024 aa10.77□□□□□ -0.69
RABGGTA-217ENST00000560521 PRR33A8MZF0 331 aa10.76□□□□□ -0.69
RABGGTA-217ENST00000560521 F5H6K3 240 aa10.76□□□□□ -0.69
RABGGTA-217ENST00000560521 GOLIM4O00461 696 aa10.76□□□□□ -0.69
RABGGTA-217ENST00000560521 DYNC1LI2O43237 492 aaPredicted RBP10.76□□□□□ -0.69
RABGGTA-217ENST00000560521 ZBED4O75132 1171 aa10.76□□□□□ -0.69
RABGGTA-217ENST00000560521 MBD4O95243 580 aa10.76□□□□□ -0.69
RABGGTA-217ENST00000560521 MRE11P49959 708 aa10.76□□□□□ -0.69
RABGGTA-217ENST00000560521 KLRC3Q07444 240 aa10.76□□□□□ -0.69
RABGGTA-217ENST00000560521 GRB10Q13322 594 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms