RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 VAT1LQ9HCJ6 419 aa18.08■□□□□ 0.48
LYSMD2-204ENST00000560491 ZNF236Q9UL36 1845 aa18.07■□□□□ 0.48
LYSMD2-204ENST00000560491 DHX16O60231 1041 aaKnown RBP18.07■□□□□ 0.48
LYSMD2-204ENST00000560491 SLC25A27O95847 323 aa18.07■□□□□ 0.48
LYSMD2-204ENST00000560491 HOXD10P28358 340 aa18.07■□□□□ 0.48
LYSMD2-204ENST00000560491 FLT3LGP49771 235 aa18.07■□□□□ 0.48
LYSMD2-204ENST00000560491 OAZ1P54368 228 aa18.07■□□□□ 0.48
LYSMD2-204ENST00000560491 FBXO46Q6PJ61 603 aaPredicted RBP18.07■□□□□ 0.48
LYSMD2-204ENST00000560491 NBPF11Q86T75 865 aa18.07■□□□□ 0.48
LYSMD2-204ENST00000560491 CTCFLQ8NI51 663 aaPredicted RBP18.07■□□□□ 0.48
LYSMD2-204ENST00000560491 MROH8Q9H579 483 aa18.07■□□□□ 0.48
LYSMD2-204ENST00000560491 JMJD4Q9H9V9 463 aa18.07■□□□□ 0.48
LYSMD2-204ENST00000560491 HOMER2Q9NSB8 354 aa18.07■□□□□ 0.48
LYSMD2-204ENST00000560491 GJD2Q9UKL4 321 aa18.07■□□□□ 0.48
LYSMD2-204ENST00000560491 NAP1L2Q9ULW6 460 aaPredicted RBP18.07■□□□□ 0.48
LYSMD2-204ENST00000560491 BAZ2BQ9UIF8 2168 aaKnown RBP18.07■□□□□ 0.48
LYSMD2-204ENST00000560491 PLEKHA8P1O95397 391 aa18.06■□□□□ 0.48
LYSMD2-204ENST00000560491 PTPREP23469 700 aa18.06■□□□□ 0.48
LYSMD2-204ENST00000560491 TOB2Q14106 344 aaPredicted RBP18.06■□□□□ 0.48
LYSMD2-204ENST00000560491 PKN2Q16513 984 aaKnown RBP18.06■□□□□ 0.48
LYSMD2-204ENST00000560491 CDC37Q16543 378 aaPredicted RBP18.06■□□□□ 0.48
LYSMD2-204ENST00000560491 SYNE3Q6ZMZ3 975 aa18.06■□□□□ 0.48
LYSMD2-204ENST00000560491 IL17RAQ96F46 866 aa18.06■□□□□ 0.48
LYSMD2-204ENST00000560491 MAP3K14Q99558 947 aa18.06■□□□□ 0.48
LYSMD2-204ENST00000560491 AGXT2Q9BYV1 514 aa18.06■□□□□ 0.48
LYSMD2-204ENST00000560491 CCPG1Q9ULG6 757 aa18.06■□□□□ 0.48
LYSMD2-204ENST00000560491 IVNS1ABPQ9Y6Y0 642 aa18.06■□□□□ 0.48
LYSMD2-204ENST00000560491 PLXNA1Q9UIW2 1896 aa18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 ZBTB43O43298 467 aa18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 CYTH3O43739 400 aa18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 ICAM1P05362 532 aa18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 CALM1P0DP23 149 aa18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 CALM2P0DP24 149 aa18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 CALM3P0DP25 149 aa18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 ALAS1P13196 640 aa18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 KIF5BP33176 963 aa18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 PRMT2P55345 433 aa18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 GRB14Q14449 540 aa18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 MORN1Q5T089 497 aa18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 TNS4Q8IZW8 715 aa18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 CMTR1Q8N1G2 835 aaKnown RBP18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 FBXL16Q8N461 479 aa18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 RAET1EQ8TD07 263 aa18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 SOCS4Q8WXH5 440 aa18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 NUDT12Q9BQG2 462 aa18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 LARP6Q9BRS8 491 aaKnown RBP18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 C22orf23Q9BZE7 217 aa18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 PDRG1Q9NUG6 133 aa18.05■□□□□ 0.48
LYSMD2-204ENST00000560491 GOLGA8AA7E2F4 631 aa18.04■□□□□ 0.48
LYSMD2-204ENST00000560491 GOLGA8BA8MQT2 603 aa18.04■□□□□ 0.48
LYSMD2-204ENST00000560491 CYP2B6P20813 491 aa18.04■□□□□ 0.48
LYSMD2-204ENST00000560491 COPB2P35606 906 aa18.04■□□□□ 0.48
LYSMD2-204ENST00000560491 QRICH1Q2TAL8 776 aa18.04■□□□□ 0.48
LYSMD2-204ENST00000560491 HOMER1Q86YM7 354 aa18.04■□□□□ 0.48
LYSMD2-204ENST00000560491 FANCBQ8NB91 859 aa18.04■□□□□ 0.48
LYSMD2-204ENST00000560491 USP6NLQ92738 828 aa18.04■□□□□ 0.48
LYSMD2-204ENST00000560491 RNF146Q9NTX7 359 aa18.04■□□□□ 0.48
LYSMD2-204ENST00000560491 RBBP6Q7Z6E9 1792 aaKnown RBP18.04■□□□□ 0.48
LYSMD2-204ENST00000560491 CENPFP49454 3210 aa18.04■□□□□ 0.48
LYSMD2-204ENST00000560491 SLC15A5A6NIM6 579 aa18.03■□□□□ 0.48
LYSMD2-204ENST00000560491 ADORA2AP29274 412 aa18.03■□□□□ 0.48
LYSMD2-204ENST00000560491 RTN1Q16799 776 aa18.03■□□□□ 0.48
LYSMD2-204ENST00000560491 USH1GQ495M9 461 aa18.03■□□□□ 0.48
LYSMD2-204ENST00000560491 MUM1L1Q5H9M0 696 aa18.03■□□□□ 0.48
LYSMD2-204ENST00000560491 SRBD1Q8N5C6 995 aaKnown RBP18.03■□□□□ 0.48
LYSMD2-204ENST00000560491 PIBF1Q8WXW3 757 aa18.03■□□□□ 0.48
LYSMD2-204ENST00000560491 TRERF1Q96PN7 1200 aa18.03■□□□□ 0.48
LYSMD2-204ENST00000560491 PIGSQ96S52 555 aa18.03■□□□□ 0.48
LYSMD2-204ENST00000560491 MMP19Q99542 508 aa18.03■□□□□ 0.48
LYSMD2-204ENST00000560491 BACH2Q9BYV9 841 aa18.03■□□□□ 0.48
LYSMD2-204ENST00000560491 RIOX1Q9H6W3 641 aa18.03■□□□□ 0.48
LYSMD2-204ENST00000560491 HPS5Q9UPZ3 1129 aa18.03■□□□□ 0.48
LYSMD2-204ENST00000560491 LCTP09848 1927 aa18.02■□□□□ 0.48
LYSMD2-204ENST00000560491 FCER1AP12319 257 aa18.02■□□□□ 0.48
LYSMD2-204ENST00000560491 ELNP15502 786 aa18.02■□□□□ 0.48
LYSMD2-204ENST00000560491 RGS2P41220 211 aa18.02■□□□□ 0.48
LYSMD2-204ENST00000560491 RBM25P49756 843 aaKnown RBP18.02■□□□□ 0.48
LYSMD2-204ENST00000560491 MAP2K5Q13163 448 aa18.02■□□□□ 0.48
LYSMD2-204ENST00000560491 IRF5Q13568 498 aa18.02■□□□□ 0.48
LYSMD2-204ENST00000560491 TMTC3Q6ZXV5 915 aa18.02■□□□□ 0.48
LYSMD2-204ENST00000560491 CHST13Q8NET6 341 aa18.02■□□□□ 0.48
LYSMD2-204ENST00000560491 SH3TC2Q8TF17 1288 aa18.02■□□□□ 0.48
LYSMD2-204ENST00000560491 MTMR8Q96EF0 704 aa18.02■□□□□ 0.48
LYSMD2-204ENST00000560491 KIF2CQ99661 725 aa18.02■□□□□ 0.48
LYSMD2-204ENST00000560491 SPZ1Q9BXG8 430 aa18.02■□□□□ 0.48
LYSMD2-204ENST00000560491 ACAD9Q9H845 621 aa18.02■□□□□ 0.48
LYSMD2-204ENST00000560491 STRNO43815 780 aa18.01■□□□□ 0.47
LYSMD2-204ENST00000560491 ADCY3O60266 1144 aa18.01■□□□□ 0.47
LYSMD2-204ENST00000560491 PPP1R11O60927 126 aaPredicted RBP18.01■□□□□ 0.47
LYSMD2-204ENST00000560491 COBLO75128 1261 aa18.01■□□□□ 0.47
LYSMD2-204ENST00000560491 PGK2P07205 417 aa18.01■□□□□ 0.47
LYSMD2-204ENST00000560491 CDC27P30260 824 aa18.01■□□□□ 0.47
LYSMD2-204ENST00000560491 GNAQP50148 359 aa18.01■□□□□ 0.47
LYSMD2-204ENST00000560491 METAP2P50579 478 aaKnown RBP eCLIP18.01■□□□□ 0.47
LYSMD2-204ENST00000560491 KCTD2Q14681 263 aa18.01■□□□□ 0.47
LYSMD2-204ENST00000560491 CCL14Q16627 93 aa18.01■□□□□ 0.47
LYSMD2-204ENST00000560491 TKFCQ3LXA3 575 aa18.01■□□□□ 0.47
LYSMD2-204ENST00000560491 SLC9C1Q4G0N8 1177 aa18.01■□□□□ 0.47
LYSMD2-204ENST00000560491 CCDC82Q8N4S0 544 aa18.01■□□□□ 0.47
LYSMD2-204ENST00000560491 NPLOC4Q8TAT6 608 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms