RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 PI4KBQ9UBF8 816 aa16■□□□□ 0.15
CARMIL3-203ENST00000560349 C10orf71Q711Q0 1435 aa15.99■□□□□ 0.15
CARMIL3-203ENST00000560349 SLFN14P0C7P3 912 aa15.99■□□□□ 0.15
CARMIL3-203ENST00000560349 TRAPPC10P48553 1259 aa15.99■□□□□ 0.15
CARMIL3-203ENST00000560349 REXO1Q8N1G1 1221 aaKnown RBP15.99■□□□□ 0.15
CARMIL3-203ENST00000560349 GJA10Q969M2 543 aa15.99■□□□□ 0.15
CARMIL3-203ENST00000560349 MTRQ99707 1265 aa15.99■□□□□ 0.15
CARMIL3-203ENST00000560349 C6orf50Q9HD87 102 aa15.99■□□□□ 0.15
CARMIL3-203ENST00000560349 SIPA1L1O43166 1804 aa15.99■□□□□ 0.15
CARMIL3-203ENST00000560349 RGPD3A6NKT7 1758 aaPredicted RBP15.99■□□□□ 0.15
CARMIL3-203ENST00000560349 RGPD4Q7Z3J3 1758 aa15.99■□□□□ 0.15
CARMIL3-203ENST00000560349 BMP15O95972 392 aa15.99■□□□□ 0.15
CARMIL3-203ENST00000560349 SNHG28P0DPA3 235 aa15.99■□□□□ 0.15
CARMIL3-203ENST00000560349 NT5C2P49902 561 aa15.99■□□□□ 0.15
CARMIL3-203ENST00000560349 MYL5Q02045 173 aa15.99■□□□□ 0.15
CARMIL3-203ENST00000560349 ASPRV1Q53RT3 343 aa15.99■□□□□ 0.15
CARMIL3-203ENST00000560349 ARID3AQ99856 593 aa15.99■□□□□ 0.15
CARMIL3-203ENST00000560349 IDI2Q9BXS1 227 aa15.99■□□□□ 0.15
CARMIL3-203ENST00000560349 HOOK1Q9UJC3 728 aaKnown RBP15.99■□□□□ 0.15
CARMIL3-203ENST00000560349 GH2P01242 217 aa15.98■□□□□ 0.15
CARMIL3-203ENST00000560349 GTF2F1P35269 517 aaKnown RBP eCLIP15.98■□□□□ 0.15
CARMIL3-203ENST00000560349 ICA1Q05084 483 aa15.98■□□□□ 0.15
CARMIL3-203ENST00000560349 MRFAP1L1Q96HT8 127 aa15.98■□□□□ 0.15
CARMIL3-203ENST00000560349 MED15Q96RN5 788 aa15.98■□□□□ 0.15
CARMIL3-203ENST00000560349 BPIFA3Q9BQP9 254 aa15.98■□□□□ 0.15
CARMIL3-203ENST00000560349 CD44P16070 742 aaKnown RBP15.98■□□□□ 0.15
CARMIL3-203ENST00000560349 TNNI2P48788 182 aa15.98■□□□□ 0.15
CARMIL3-203ENST00000560349 FANCCQ00597 558 aa15.98■□□□□ 0.15
CARMIL3-203ENST00000560349 CUL4BQ13620 913 aa15.98■□□□□ 0.15
CARMIL3-203ENST00000560349 NONOQ15233 471 aaKnown RBP eCLIP15.98■□□□□ 0.15
CARMIL3-203ENST00000560349 SAMD1Q6SPF0 538 aaPredicted RBP15.98■□□□□ 0.15
CARMIL3-203ENST00000560349 TMC6Q7Z403 805 aa15.98■□□□□ 0.15
CARMIL3-203ENST00000560349 POTEDQ86YR6 584 aa15.98■□□□□ 0.15
CARMIL3-203ENST00000560349 SIAH1Q8IUQ4 282 aa15.98■□□□□ 0.15
CARMIL3-203ENST00000560349 ZNF710Q8N1W2 664 aa15.98■□□□□ 0.15
CARMIL3-203ENST00000560349 DAGLBQ8NCG7 672 aa15.98■□□□□ 0.15
CARMIL3-203ENST00000560349 ZNF646O15015 1829 aaPredicted RBP15.97■□□□□ 0.15
CARMIL3-203ENST00000560349 SLC1A4P43007 532 aa15.97■□□□□ 0.15
CARMIL3-203ENST00000560349 SARSP49591 514 aaKnown RBP15.97■□□□□ 0.15
CARMIL3-203ENST00000560349 GOLGA8FQ08AF8 430 aa15.97■□□□□ 0.15
CARMIL3-203ENST00000560349 GOLGA8DPQ0D2H9 430 aa15.97■□□□□ 0.15
CARMIL3-203ENST00000560349 MORC3Q14149 939 aa15.97■□□□□ 0.15
CARMIL3-203ENST00000560349 E2F4Q16254 413 aa15.97■□□□□ 0.15
CARMIL3-203ENST00000560349 DTHD1Q6ZMT9 781 aa15.97■□□□□ 0.15
CARMIL3-203ENST00000560349 MTERF4Q7Z6M4 381 aaKnown RBP15.97■□□□□ 0.15
CARMIL3-203ENST00000560349 LRRC15Q8TF66 581 aa15.97■□□□□ 0.15
CARMIL3-203ENST00000560349 EHD4Q9H223 541 aa15.97■□□□□ 0.15
CARMIL3-203ENST00000560349 DHX36Q9H2U1 1008 aaKnown RBP15.97■□□□□ 0.15
CARMIL3-203ENST00000560349 MAPK8IP1Q9UQF2 711 aa15.97■□□□□ 0.15
CARMIL3-203ENST00000560349 MYH4Q9Y623 1939 aa15.97■□□□□ 0.15
CARMIL3-203ENST00000560349 TDP2O95551 362 aa15.97■□□□□ 0.15
CARMIL3-203ENST00000560349 SERPINC1P01008 464 aa15.97■□□□□ 0.15
CARMIL3-203ENST00000560349 TPM3P06753 285 aa15.97■□□□□ 0.15
CARMIL3-203ENST00000560349 RSBN1LQ6PCB5 846 aaPredicted RBP15.97■□□□□ 0.15
CARMIL3-203ENST00000560349 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.97■□□□□ 0.15
CARMIL3-203ENST00000560349 NFE2L3Q9Y4A8 694 aa15.97■□□□□ 0.15
CARMIL3-203ENST00000560349 TMEM232C9JQI7 657 aa15.96■□□□□ 0.15
CARMIL3-203ENST00000560349 GNA11P29992 359 aa15.96■□□□□ 0.15
CARMIL3-203ENST00000560349 IKQ13123 557 aaPredicted RBP15.96■□□□□ 0.15
CARMIL3-203ENST00000560349 ABCB5Q2M3G0 1257 aa15.96■□□□□ 0.15
CARMIL3-203ENST00000560349 MIGA2Q7L4E1 593 aa15.96■□□□□ 0.15
CARMIL3-203ENST00000560349 CCDC84Q86UT8 332 aaPredicted RBP15.96■□□□□ 0.15
CARMIL3-203ENST00000560349 SUPT20HQ8NEM7 779 aa15.96■□□□□ 0.15
CARMIL3-203ENST00000560349 CCDC12Q8WUD4 166 aaPredicted RBP15.96■□□□□ 0.15
CARMIL3-203ENST00000560349 SPDYE2BA6NHP3 402 aa15.96■□□□□ 0.15
CARMIL3-203ENST00000560349 SMTNL1A8MU46 457 aa15.96■□□□□ 0.15
CARMIL3-203ENST00000560349 SPDYE6P0CI01 402 aa15.96■□□□□ 0.15
CARMIL3-203ENST00000560349 TECP42680 631 aa15.96■□□□□ 0.15
CARMIL3-203ENST00000560349 ADCY7P51828 1080 aa15.96■□□□□ 0.15
CARMIL3-203ENST00000560349 SLFN13Q68D06 897 aa15.96■□□□□ 0.15
CARMIL3-203ENST00000560349 PDXDC2PQ6P474 469 aa15.96■□□□□ 0.15
CARMIL3-203ENST00000560349 SAMSN1Q9NSI8 373 aaKnown RBP15.96■□□□□ 0.15
CARMIL3-203ENST00000560349 SLC37A4O43826 429 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 NEMFO60524 1076 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 STAT6P42226 847 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 ECE1P42892 770 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 FKBP1AP62942 108 aaKnown RBP15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 HDLBPQ00341 1268 aaKnown RBP15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 DPYDQ12882 1025 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 DHX8Q14562 1220 aaKnown RBP15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 ZYXQ15942 572 aaKnown RBP15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 NT5DC1Q5TFE4 455 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 CC2D2BQ6DHV5 1058 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 NEK8Q86SG6 692 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 TMEM39BQ9GZU3 492 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 USP17L15C9J2P7 530 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 USP17L13C9JLJ4 530 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 USP17L11C9JVI0 530 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 USP17L18D6R9N7 530 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 USP17L22D6RA61 530 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 USP17L17D6RBQ6 530 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 USP17L19D6RCP7 530 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 USP17L20D6RJB6 530 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 IKBKBO14920 756 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 TPM4P67936 248 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 USP17L24Q0WX57 530 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 USP17L6PQ6QN14 398 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 KRT25Q7Z3Z0 450 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 SH3RF1Q7Z6J0 888 aa15.95■□□□□ 0.14
CARMIL3-203ENST00000560349 IQUBQ8NA54 791 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms