RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 MSCO60682 206 aa15.51■□□□□ 0.07
SMAD3-213ENST00000560175 FARP2O94887 1054 aaPredicted RBP15.51■□□□□ 0.07
SMAD3-213ENST00000560175 ICAM1P05362 532 aa15.51■□□□□ 0.07
SMAD3-213ENST00000560175 PGK2P07205 417 aa15.51■□□□□ 0.07
SMAD3-213ENST00000560175 NECTIN1Q15223 517 aa15.51■□□□□ 0.07
SMAD3-213ENST00000560175 SYDE2Q5VT97 1194 aa15.51■□□□□ 0.07
SMAD3-213ENST00000560175 PRPF38BQ5VTL8 546 aaKnown RBP15.51■□□□□ 0.07
SMAD3-213ENST00000560175 STOX1Q6ZVD7 989 aa15.51■□□□□ 0.07
SMAD3-213ENST00000560175 FGD4Q96M96 766 aa15.51■□□□□ 0.07
SMAD3-213ENST00000560175 CTDP1Q9Y5B0 961 aaPredicted RBP15.51■□□□□ 0.07
SMAD3-213ENST00000560175 RBM8AQ9Y5S9 174 aaKnown RBP15.51■□□□□ 0.07
SMAD3-213ENST00000560175 COL6A1P12109 1028 aa15.5■□□□□ 0.07
SMAD3-213ENST00000560175 SLC16A2P36021 539 aa15.5■□□□□ 0.07
SMAD3-213ENST00000560175 CCDC96Q2M329 555 aa15.5■□□□□ 0.07
SMAD3-213ENST00000560175 FAM133AQ8N9E0 248 aa15.5■□□□□ 0.07
SMAD3-213ENST00000560175 MTA3Q9BTC8 594 aa15.5■□□□□ 0.07
SMAD3-213ENST00000560175 DDX20Q9UHI6 824 aaKnown RBP15.5■□□□□ 0.07
SMAD3-213ENST00000560175 ALPK3Q96L96 1907 aa15.5■□□□□ 0.07
SMAD3-213ENST00000560175 MCM3APO60318 1980 aa15.49■□□□□ 0.07
SMAD3-213ENST00000560175 SYNGAP1Q96PV0 1343 aa15.49■□□□□ 0.07
SMAD3-213ENST00000560175 CEP290O15078 2479 aa15.49■□□□□ 0.07
SMAD3-213ENST00000560175 SEPT4O43236 478 aa15.49■□□□□ 0.07
SMAD3-213ENST00000560175 TRDNQ13061 729 aa15.49■□□□□ 0.07
SMAD3-213ENST00000560175 IKQ13123 557 aaPredicted RBP15.49■□□□□ 0.07
SMAD3-213ENST00000560175 NECAB2Q7Z6G3 386 aa15.49■□□□□ 0.07
SMAD3-213ENST00000560175 NCOA7Q8NI08 942 aa15.49■□□□□ 0.07
SMAD3-213ENST00000560175 CHMP4CQ96CF2 233 aa15.49■□□□□ 0.07
SMAD3-213ENST00000560175 DDX11Q96FC9 970 aa15.49■□□□□ 0.07
SMAD3-213ENST00000560175 PAWRQ96IZ0 340 aaKnown RBP15.49■□□□□ 0.07
SMAD3-213ENST00000560175 TRERF1Q96PN7 1200 aa15.49■□□□□ 0.07
SMAD3-213ENST00000560175 ACAD9Q9H845 621 aa15.49■□□□□ 0.07
SMAD3-213ENST00000560175 KAT14Q9H8E8 782 aa15.49■□□□□ 0.07
SMAD3-213ENST00000560175 GPCPD1Q9NPB8 672 aa15.49■□□□□ 0.07
SMAD3-213ENST00000560175 PNMA2Q9UL42 364 aa15.49■□□□□ 0.07
SMAD3-213ENST00000560175 LCTP09848 1927 aa15.49■□□□□ 0.07
SMAD3-213ENST00000560175 FRMPD2Q68DX3 1309 aaPredicted RBP15.48■□□□□ 0.07
SMAD3-213ENST00000560175 WDR19Q8NEZ3 1342 aa15.48■□□□□ 0.07
SMAD3-213ENST00000560175 SNAI1O95863 264 aaPredicted RBP15.48■□□□□ 0.07
SMAD3-213ENST00000560175 ZNF865P0CJ78 1059 aaPredicted RBP15.48■□□□□ 0.07
SMAD3-213ENST00000560175 SNAP25P60880 206 aa15.48■□□□□ 0.07
SMAD3-213ENST00000560175 ASPRV1Q53RT3 343 aa15.48■□□□□ 0.07
SMAD3-213ENST00000560175 PRAMEF19Q5SWL8 479 aa15.48■□□□□ 0.07
SMAD3-213ENST00000560175 KIAA1211Q6ZU35 1233 aa15.48■□□□□ 0.07
SMAD3-213ENST00000560175 MB21D2Q8IYB1 491 aaPredicted RBP15.48■□□□□ 0.07
SMAD3-213ENST00000560175 ANKRD35Q8N283 1001 aa15.48■□□□□ 0.07
SMAD3-213ENST00000560175 IGDCC4Q8TDY8 1250 aa15.48■□□□□ 0.07
SMAD3-213ENST00000560175 UBAC1Q9BSL1 405 aa15.48■□□□□ 0.07
SMAD3-213ENST00000560175 HTATIP2Q9BUP3 242 aa15.48■□□□□ 0.07
SMAD3-213ENST00000560175 MAF1Q9H063 256 aa15.48■□□□□ 0.07
SMAD3-213ENST00000560175 A1CFQ9NQ94 594 aaKnown RBP15.48■□□□□ 0.07
SMAD3-213ENST00000560175 RNF146Q9NTX7 359 aa15.48■□□□□ 0.07
SMAD3-213ENST00000560175 MTMR7Q9Y216 660 aa15.48■□□□□ 0.07
SMAD3-213ENST00000560175 ANTXR2P58335 489 aa15.47■□□□□ 0.07
SMAD3-213ENST00000560175 TSGA10IPQ3SY00 556 aa15.47■□□□□ 0.07
SMAD3-213ENST00000560175 MUM1L1Q5H9M0 696 aa15.47■□□□□ 0.07
SMAD3-213ENST00000560175 IFIT1BQ5T764 474 aaKnown RBP15.47■□□□□ 0.07
SMAD3-213ENST00000560175 CCDC174Q6PII3 467 aa15.47■□□□□ 0.07
SMAD3-213ENST00000560175 DIS3LQ8TF46 1054 aaKnown RBP15.47■□□□□ 0.07
SMAD3-213ENST00000560175 CCPG1Q9ULG6 757 aa15.47■□□□□ 0.07
SMAD3-213ENST00000560175 MYH6P13533 1939 aa15.47■□□□□ 0.07
SMAD3-213ENST00000560175 PFASO15067 1338 aa15.46■□□□□ 0.07
SMAD3-213ENST00000560175 PALM3A6NDB9 673 aaPredicted RBP15.46■□□□□ 0.07
SMAD3-213ENST00000560175 SLC27A2O14975 620 aa15.46■□□□□ 0.07
SMAD3-213ENST00000560175 CDC45O75419 566 aa15.46■□□□□ 0.07
SMAD3-213ENST00000560175 NEFLP07196 543 aa15.46■□□□□ 0.07
SMAD3-213ENST00000560175 GOLGA8HP0CJ92 632 aa15.46■□□□□ 0.07
SMAD3-213ENST00000560175 ALAS1P13196 640 aa15.46■□□□□ 0.07
SMAD3-213ENST00000560175 TROAPQ12815 778 aa15.46■□□□□ 0.07
SMAD3-213ENST00000560175 MORC4Q8TE76 937 aa15.46■□□□□ 0.07
SMAD3-213ENST00000560175 CLEC4DQ8WXI8 215 aa15.46■□□□□ 0.07
SMAD3-213ENST00000560175 MTMR8Q96EF0 704 aa15.46■□□□□ 0.07
SMAD3-213ENST00000560175 KATNBL1Q9H079 304 aa15.46■□□□□ 0.07
SMAD3-213ENST00000560175 CYP39A1Q9NYL5 469 aa15.46■□□□□ 0.07
SMAD3-213ENST00000560175 ISY1Q9ULR0 285 aaKnown RBP15.46■□□□□ 0.07
SMAD3-213ENST00000560175 DNAH12Q6ZR08 3092 aa15.46■□□□□ 0.07
SMAD3-213ENST00000560175 ASTN1O14525 1302 aa15.45■□□□□ 0.06
SMAD3-213ENST00000560175 SOWAHBA6NEL2 793 aa15.45■□□□□ 0.06
SMAD3-213ENST00000560175 PARP1P09874 1014 aaKnown RBP15.45■□□□□ 0.06
SMAD3-213ENST00000560175 TAL1P17542 331 aaPredicted RBP15.45■□□□□ 0.06
SMAD3-213ENST00000560175 CNGA1P29973 690 aa15.45■□□□□ 0.06
SMAD3-213ENST00000560175 SLC4A3P48751 1232 aa15.45■□□□□ 0.06
SMAD3-213ENST00000560175 CNTN2Q02246 1040 aa15.45■□□□□ 0.06
SMAD3-213ENST00000560175 CREB3L3Q68CJ9 461 aa15.45■□□□□ 0.06
SMAD3-213ENST00000560175 RALYLQ86SE5 291 aaKnown RBP15.45■□□□□ 0.06
SMAD3-213ENST00000560175 ADGRF4Q8IZF3 695 aa15.45■□□□□ 0.06
SMAD3-213ENST00000560175 STAG2Q8N3U4 1231 aa15.45■□□□□ 0.06
SMAD3-213ENST00000560175 RGS22Q8NE09 1264 aa15.45■□□□□ 0.06
SMAD3-213ENST00000560175 MAP3K14Q99558 947 aa15.45■□□□□ 0.06
SMAD3-213ENST00000560175 UBA5Q9GZZ9 404 aa15.45■□□□□ 0.06
SMAD3-213ENST00000560175 SENP2Q9HC62 589 aa15.45■□□□□ 0.06
SMAD3-213ENST00000560175 HOMER2Q9NSB8 354 aa15.45■□□□□ 0.06
SMAD3-213ENST00000560175 PPP4R2Q9NY27 417 aa15.45■□□□□ 0.06
SMAD3-213ENST00000560175 MAD2L2Q9UI95 211 aa15.45■□□□□ 0.06
SMAD3-213ENST00000560175 LOC102724159A0A0B4J2E5 919 aa15.44■□□□□ 0.06
SMAD3-213ENST00000560175 POTEB2H3BUK9 544 aa15.44■□□□□ 0.06
SMAD3-213ENST00000560175 DNM1LO00429 736 aa15.44■□□□□ 0.06
SMAD3-213ENST00000560175 IFIT3O14879 490 aaKnown RBP15.44■□□□□ 0.06
SMAD3-213ENST00000560175 COL9A3Q14050 684 aaPredicted RBP15.44■□□□□ 0.06
SMAD3-213ENST00000560175 PWP2Q15269 919 aaKnown RBP15.44■□□□□ 0.06
SMAD3-213ENST00000560175 ARRDC4Q8NCT1 418 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms