RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 SKIV2LQ15477 1246 aaKnown RBP15.46■□□□□ 0.07
RABGGTA-213ENST00000560127 SNRNP48Q6IEG0 339 aaKnown RBP15.46■□□□□ 0.07
RABGGTA-213ENST00000560127 FRAT1Q92837 279 aaPredicted RBP15.46■□□□□ 0.07
RABGGTA-213ENST00000560127 ABHD16BQ9H3Z7 469 aa15.46■□□□□ 0.07
RABGGTA-213ENST00000560127 KANSL2Q9H9L4 492 aa15.46■□□□□ 0.07
RABGGTA-213ENST00000560127 GOPCQ9HD26 462 aa15.46■□□□□ 0.07
RABGGTA-213ENST00000560127 PCDHA11Q9Y5I1 949 aa15.46■□□□□ 0.07
RABGGTA-213ENST00000560127 RFXAPO00287 272 aa15.45■□□□□ 0.06
RABGGTA-213ENST00000560127 POU3F3P20264 500 aaPredicted RBP15.45■□□□□ 0.06
RABGGTA-213ENST00000560127 CCL23P55773 120 aa15.45■□□□□ 0.06
RABGGTA-213ENST00000560127 BEX3Q00994 111 aa15.45■□□□□ 0.06
RABGGTA-213ENST00000560127 TTF1Q15361 905 aaPredicted RBP15.45■□□□□ 0.06
RABGGTA-213ENST00000560127 TMEM31Q5JXX7 168 aa15.45■□□□□ 0.06
RABGGTA-213ENST00000560127 C12orf60Q5U649 245 aa15.45■□□□□ 0.06
RABGGTA-213ENST00000560127 AACSQ86V21 672 aa15.45■□□□□ 0.06
RABGGTA-213ENST00000560127 NUP88Q99567 741 aaPredicted RBP15.45■□□□□ 0.06
RABGGTA-213ENST00000560127 NOC4LQ9BVI4 516 aaKnown RBP15.45■□□□□ 0.06
RABGGTA-213ENST00000560127 KATNBL1Q9H079 304 aa15.45■□□□□ 0.06
RABGGTA-213ENST00000560127 WNT8AQ9H1J5 351 aa15.45■□□□□ 0.06
RABGGTA-213ENST00000560127 ARMT1Q9H993 441 aa15.45■□□□□ 0.06
RABGGTA-213ENST00000560127 C11orf16Q9NQ32 467 aa15.45■□□□□ 0.06
RABGGTA-213ENST00000560127 MTCH2Q9Y6C9 303 aa15.45■□□□□ 0.06
RABGGTA-213ENST00000560127 SLC4A7Q9Y6M7 1214 aa15.45■□□□□ 0.06
RABGGTA-213ENST00000560127 PTPRSQ13332 1948 aa15.45■□□□□ 0.06
RABGGTA-213ENST00000560127 ASTN1O14525 1302 aa15.44■□□□□ 0.06
RABGGTA-213ENST00000560127 GRIN2DO15399 1336 aa15.44■□□□□ 0.06
RABGGTA-213ENST00000560127 TRIOO75962 3097 aa15.44■□□□□ 0.06
RABGGTA-213ENST00000560127 TLL1O43897 1013 aa15.44■□□□□ 0.06
RABGGTA-213ENST00000560127 RAD21O60216 631 aa15.44■□□□□ 0.06
RABGGTA-213ENST00000560127 CXCL17Q6UXB2 119 aa15.44■□□□□ 0.06
RABGGTA-213ENST00000560127 C16orf86Q6ZW13 317 aa15.44■□□□□ 0.06
RABGGTA-213ENST00000560127 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.44■□□□□ 0.06
RABGGTA-213ENST00000560127 ARMCX2Q7L311 632 aa15.44■□□□□ 0.06
RABGGTA-213ENST00000560127 KHSRPQ92945 711 aaKnown RBP eCLIP15.44■□□□□ 0.06
RABGGTA-213ENST00000560127 SLF1Q9BQI6 1058 aa15.44■□□□□ 0.06
RABGGTA-213ENST00000560127 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.44■□□□□ 0.06
RABGGTA-213ENST00000560127 LCTP09848 1927 aa15.43■□□□□ 0.06
RABGGTA-213ENST00000560127 SLFNL1Q499Z3 407 aa15.43■□□□□ 0.06
RABGGTA-213ENST00000560127 KRT40Q6A162 431 aa15.43■□□□□ 0.06
RABGGTA-213ENST00000560127 TRPV6Q9H1D0 765 aa15.43■□□□□ 0.06
RABGGTA-213ENST00000560127 ATP8A2Q9NTI2 1148 aa15.43■□□□□ 0.06
RABGGTA-213ENST00000560127 COL4A4P53420 1690 aaPredicted RBP15.42■□□□□ 0.06
RABGGTA-213ENST00000560127 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.42■□□□□ 0.06
RABGGTA-213ENST00000560127 EPOPA6NHQ4 379 aa15.42■□□□□ 0.06
RABGGTA-213ENST00000560127 USP17L12C9JPN9 530 aa15.42■□□□□ 0.06
RABGGTA-213ENST00000560127 USP17L21D6R901 530 aa15.42■□□□□ 0.06
RABGGTA-213ENST00000560127 GOLIM4O00461 696 aa15.42■□□□□ 0.06
RABGGTA-213ENST00000560127 ATP2A1O14983 1001 aa15.42■□□□□ 0.06
RABGGTA-213ENST00000560127 GPR37L1O60883 481 aa15.42■□□□□ 0.06
RABGGTA-213ENST00000560127 MBD4O95243 580 aa15.42■□□□□ 0.06
RABGGTA-213ENST00000560127 ATP2A2P16615 1042 aaKnown RBP15.42■□□□□ 0.06
RABGGTA-213ENST00000560127 SLC4A3P48751 1232 aa15.42■□□□□ 0.06
RABGGTA-213ENST00000560127 ITGA7Q13683 1181 aa15.42■□□□□ 0.06
RABGGTA-213ENST00000560127 CCDC144CPQ8IYA2 1237 aa15.42■□□□□ 0.06
RABGGTA-213ENST00000560127 RPUSD2Q8IZ73 545 aaKnown RBP15.42■□□□□ 0.06
RABGGTA-213ENST00000560127 CPXCR1Q8N123 301 aa15.42■□□□□ 0.06
RABGGTA-213ENST00000560127 COG5Q9UP83 839 aa15.42■□□□□ 0.06
RABGGTA-213ENST00000560127 ZBBXA8MT70 800 aa15.41■□□□□ 0.06
RABGGTA-213ENST00000560127 GTPBP6O43824 516 aaPredicted RBP15.41■□□□□ 0.06
RABGGTA-213ENST00000560127 B4GALT4O60513 344 aa15.41■□□□□ 0.06
RABGGTA-213ENST00000560127 CABYRO75952 493 aa15.41■□□□□ 0.06
RABGGTA-213ENST00000560127 CA3P07451 260 aa15.41■□□□□ 0.06
RABGGTA-213ENST00000560127 PTGS1P23219 599 aa15.41■□□□□ 0.06
RABGGTA-213ENST00000560127 TTLL4Q14679 1199 aa15.41■□□□□ 0.06
RABGGTA-213ENST00000560127 ANKRD35Q8N283 1001 aa15.41■□□□□ 0.06
RABGGTA-213ENST00000560127 PRPF38AQ8NAV1 312 aaKnown RBP15.41■□□□□ 0.06
RABGGTA-213ENST00000560127 SCLYQ96I15 445 aa15.41■□□□□ 0.06
RABGGTA-213ENST00000560127 AGBL1Q96MI9 1066 aa15.41■□□□□ 0.06
RABGGTA-213ENST00000560127 CERS4Q9HA82 394 aa15.41■□□□□ 0.06
RABGGTA-213ENST00000560127 RAVER2Q9HCJ3 691 aaKnown RBP15.41■□□□□ 0.06
RABGGTA-213ENST00000560127 GNEQ9Y223 722 aaKnown RBP15.41■□□□□ 0.06
RABGGTA-213ENST00000560127 EXOC6BQ9Y2D4 811 aa15.41■□□□□ 0.06
RABGGTA-213ENST00000560127 TANC1Q9C0D5 1861 aa15.41■□□□□ 0.06
RABGGTA-213ENST00000560127 SCN10AQ9Y5Y9 1956 aa15.4■□□□□ 0.06
RABGGTA-213ENST00000560127 FAM86C2PA6NEL3 165 aa15.4■□□□□ 0.06
RABGGTA-213ENST00000560127 NDUFB10O96000 172 aa15.4■□□□□ 0.06
RABGGTA-213ENST00000560127 TNFAIP2Q03169 654 aa15.4■□□□□ 0.06
RABGGTA-213ENST00000560127 FSCN1Q16658 493 aaKnown RBP15.4■□□□□ 0.06
RABGGTA-213ENST00000560127 TMEM67Q5HYA8 995 aa15.4■□□□□ 0.06
RABGGTA-213ENST00000560127 DNAJC2Q99543 621 aaKnown RBP15.4■□□□□ 0.06
RABGGTA-213ENST00000560127 IL1RAPL2Q9NP60 686 aa15.4■□□□□ 0.06
RABGGTA-213ENST00000560127 ZNF318Q5VUA4 2279 aa15.4■□□□□ 0.06
RABGGTA-213ENST00000560127 F5H6K3 240 aa15.39■□□□□ 0.05
RABGGTA-213ENST00000560127 ZBED4O75132 1171 aa15.39■□□□□ 0.05
RABGGTA-213ENST00000560127 ARHGEF15O94989 841 aa15.39■□□□□ 0.05
RABGGTA-213ENST00000560127 ADD2P35612 726 aa15.39■□□□□ 0.05
RABGGTA-213ENST00000560127 CNTN2Q02246 1040 aa15.39■□□□□ 0.05
RABGGTA-213ENST00000560127 KLRC3Q07444 240 aa15.39■□□□□ 0.05
RABGGTA-213ENST00000560127 ZKSCAN2Q63HK3 967 aa15.39■□□□□ 0.05
RABGGTA-213ENST00000560127 NOL8Q76FK4 1167 aaKnown RBP15.39■□□□□ 0.05
RABGGTA-213ENST00000560127 TLK2Q86UE8 772 aa15.39■□□□□ 0.05
RABGGTA-213ENST00000560127 ERC1Q8IUD2 1116 aa15.39■□□□□ 0.05
RABGGTA-213ENST00000560127 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.39■□□□□ 0.05
RABGGTA-213ENST00000560127 SEZ6LQ9BYH1 1024 aa15.39■□□□□ 0.05
RABGGTA-213ENST00000560127 SLC38A10Q9HBR0 1119 aa15.39■□□□□ 0.05
RABGGTA-213ENST00000560127 ZBED9Q6R2W3 1325 aa15.39■□□□□ 0.05
RABGGTA-213ENST00000560127 CHGBP05060 677 aa15.38■□□□□ 0.05
RABGGTA-213ENST00000560127 PSMC6P62333 389 aa15.38■□□□□ 0.05
RABGGTA-213ENST00000560127 CEP85Q6P2H3 762 aa15.38■□□□□ 0.05
RABGGTA-213ENST00000560127 CTR9Q6PD62 1173 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms