RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 HPSEQ9Y251 543 aa21.28■■□□□ 1
SEMA4B-215ENST00000560089 GMNCA6NCL1 334 aa21.28■■□□□ 1
SEMA4B-215ENST00000560089 ZNF185O15231 689 aa21.28■■□□□ 1
SEMA4B-215ENST00000560089 TAF5LO75529 589 aa21.28■■□□□ 1
SEMA4B-215ENST00000560089 CLTAP09496 248 aa21.28■■□□□ 1
SEMA4B-215ENST00000560089 CCDC102BQ68D86 513 aa21.28■■□□□ 1
SEMA4B-215ENST00000560089 MTHFD1LQ6UB35 978 aa21.28■■□□□ 1
SEMA4B-215ENST00000560089 CACNA2D3Q8IZS8 1091 aa21.28■■□□□ 1
SEMA4B-215ENST00000560089 SEC16BQ96JE7 1060 aa21.28■■□□□ 1
SEMA4B-215ENST00000560089 PLEKHG4BQ96PX9 1271 aa21.28■■□□□ 1
SEMA4B-215ENST00000560089 SLC4A9Q96Q91 983 aa21.28■■□□□ 1
SEMA4B-215ENST00000560089 ZCWPW1Q9H0M4 648 aa21.28■■□□□ 1
SEMA4B-215ENST00000560089 LEMD3Q9Y2U8 911 aa21.28■■□□□ 1
SEMA4B-215ENST00000560089 GLI3P10071 1580 aa21.28■■□□□ 1
SEMA4B-215ENST00000560089 GYPCP04921 128 aa21.28■■□□□ 1
SEMA4B-215ENST00000560089 LRRC23Q53EV4 343 aaPredicted RBP21.28■■□□□ 1
SEMA4B-215ENST00000560089 CFAP58Q5T655 872 aa21.28■■□□□ 1
SEMA4B-215ENST00000560089 PNMA8AQ86V59 439 aaPredicted RBP21.28■■□□□ 1
SEMA4B-215ENST00000560089 SLC5A4Q9NY91 659 aa21.28■■□□□ 1
SEMA4B-215ENST00000560089 ZSCAN9O15535 394 aaPredicted RBP21.27■■□□□ 1
SEMA4B-215ENST00000560089 FECHP22830 423 aa21.27■■□□□ 1
SEMA4B-215ENST00000560089 FAM167BQ9BTA0 163 aa21.27■■□□□ 1
SEMA4B-215ENST00000560089 C9orf78Q9NZ63 289 aaPredicted RBP21.27■■□□□ 1
SEMA4B-215ENST00000560089 BLOC1S6Q9UL45 172 aa21.27■■□□□ 1
SEMA4B-215ENST00000560089 THRAP3Q9Y2W1 955 aaKnown RBP21.27■■□□□ 1
SEMA4B-215ENST00000560089 QPCTQ16769 361 aa21.27■□□□□ 0.99
SEMA4B-215ENST00000560089 PPP4R3AQ6IN85 833 aa21.27■□□□□ 0.99
SEMA4B-215ENST00000560089 SHC4Q6S5L8 630 aa21.27■□□□□ 0.99
SEMA4B-215ENST00000560089 ANKRD13DQ6ZTN6 518 aa21.27■□□□□ 0.99
SEMA4B-215ENST00000560089 P3H4Q92791 437 aa21.27■□□□□ 0.99
SEMA4B-215ENST00000560089 L3MBTL3Q96JM7 780 aaPredicted RBP21.27■□□□□ 0.99
SEMA4B-215ENST00000560089 GORASP1Q9BQQ3 440 aa21.27■□□□□ 0.99
SEMA4B-215ENST00000560089 LRRC1Q9BTT6 524 aa21.27■□□□□ 0.99
SEMA4B-215ENST00000560089 MAN1B1Q9UKM7 699 aa21.27■□□□□ 0.99
SEMA4B-215ENST00000560089 LUC7L3O95232 432 aaKnown RBP21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 DDX58O95786 925 aaKnown RBP21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 IGKV5-2P06315 115 aa21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 MYBL1P10243 752 aa21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 USPL1Q5W0Q7 1092 aa21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 AACSQ86V21 672 aa21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 GALNT15Q8N3T1 639 aa21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 MLKLQ8NB16 471 aa21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 C8orf76Q96K31 380 aa21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 CCDC43Q96MW1 224 aaKnown RBP21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 KDM4CQ9H3R0 1056 aa21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 ZBTB3Q9H5J0 574 aa21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 ITGB4P16144 1822 aa21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 ZNF233A6NK53 670 aa21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 MRPS25P82663 173 aaKnown RBP21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 ZNF827Q17R98 1081 aa21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 PTF1AQ7RTS3 328 aa21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 MYLK4Q86YV6 388 aaPredicted RBP21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 RUBCNQ92622 972 aa21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 CAVIN3Q969G5 261 aa21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 OSBPL1AQ9BXW6 950 aa21.26■□□□□ 0.99
SEMA4B-215ENST00000560089 FOXN1O15353 648 aa21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 GHRP10912 638 aa21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 HPDP32754 393 aaPredicted RBP21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 SLC7A5Q01650 507 aa21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 RIPK1Q13546 671 aa21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 SLC9C2Q5TAH2 1124 aa21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 CCDC170Q8IYT3 715 aa21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 AGAP11Q8TF27 550 aa21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 RBM41Q96IZ5 413 aaKnown RBP21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 HAUS4Q9H6D7 363 aa21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 PRDM16Q9HAZ2 1276 aa21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 UPP2O95045 317 aa21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 TPP2P29144 1249 aaPredicted RBP21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 PBX1P40424 430 aa21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 SLC39A14Q15043 492 aa21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 GLE1Q53GS7 698 aaKnown RBP21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 CCDC63Q8NA47 563 aa21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 ATP6V1G3Q96LB4 118 aa21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 ABHD10Q9NUJ1 306 aa21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 U3KPZ7 1027 aaPredicted RBP21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 MYH8P13535 1937 aa21.25■□□□□ 0.99
SEMA4B-215ENST00000560089 FDPSP14324 419 aaKnown RBP21.24■□□□□ 0.99
SEMA4B-215ENST00000560089 FNBP4Q8N3X1 1017 aaPredicted RBP21.24■□□□□ 0.99
SEMA4B-215ENST00000560089 BCL9O00512 1426 aa21.24■□□□□ 0.99
SEMA4B-215ENST00000560089 A0A1B0GVG6 124 aa21.24■□□□□ 0.99
SEMA4B-215ENST00000560089 KCNQ4P56696 695 aa21.24■□□□□ 0.99
SEMA4B-215ENST00000560089 VPS72Q15906 364 aa21.24■□□□□ 0.99
SEMA4B-215ENST00000560089 MMGT1Q8N4V1 131 aa21.24■□□□□ 0.99
SEMA4B-215ENST00000560089 ZFAND2BQ8WV99 257 aa21.24■□□□□ 0.99
SEMA4B-215ENST00000560089 CCT6BQ92526 530 aa21.24■□□□□ 0.99
SEMA4B-215ENST00000560089 CNKSR1Q969H4 720 aa21.24■□□□□ 0.99
SEMA4B-215ENST00000560089 SPATA31A6Q5VVP1 1343 aa21.24■□□□□ 0.99
SEMA4B-215ENST00000560089 EIF4E1BA6NMX2 242 aaKnown RBP21.24■□□□□ 0.99
SEMA4B-215ENST00000560089 PPARDQ03181 441 aa21.24■□□□□ 0.99
SEMA4B-215ENST00000560089 ITGB3BPQ13352 177 aaPredicted RBP21.24■□□□□ 0.99
SEMA4B-215ENST00000560089 RRP12Q5JTH9 1297 aaKnown RBP21.24■□□□□ 0.99
SEMA4B-215ENST00000560089 CCDC122Q5T0U0 273 aa21.24■□□□□ 0.99
SEMA4B-215ENST00000560089 MMTAG2Q9BU76 263 aaKnown RBP21.24■□□□□ 0.99
SEMA4B-215ENST00000560089 JADE2Q9NQC1 790 aa21.24■□□□□ 0.99
SEMA4B-215ENST00000560089 CYP21A2P08686 494 aa21.23■□□□□ 0.99
SEMA4B-215ENST00000560089 ABL2P42684 1182 aa21.23■□□□□ 0.99
SEMA4B-215ENST00000560089 CUL3Q13618 768 aa21.23■□□□□ 0.99
SEMA4B-215ENST00000560089 BARGINQ6ZT62 677 aa21.23■□□□□ 0.99
SEMA4B-215ENST00000560089 APTXQ7Z2E3 356 aaKnown RBP21.23■□□□□ 0.99
SEMA4B-215ENST00000560089 MED15Q96RN5 788 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms