RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 CCDC47Q96A33 483 aaKnown RBP9.14□□□□□ -0.95
SMAD3-212ENST00000559937 CCDC51Q96ER9 411 aa9.14□□□□□ -0.95
SMAD3-212ENST00000559937 CEP95Q96GE4 821 aa9.14□□□□□ -0.95
SMAD3-212ENST00000559937 ERO1AQ96HE7 468 aa9.14□□□□□ -0.95
SMAD3-212ENST00000559937 PANX2Q96RD6 677 aa9.14□□□□□ -0.95
SMAD3-212ENST00000559937 MRIQ9BWK5 157 aa9.14□□□□□ -0.95
SMAD3-212ENST00000559937 ZC3H12CQ9C0D7 883 aaKnown RBP9.14□□□□□ -0.95
SMAD3-212ENST00000559937 EHD4Q9H223 541 aa9.14□□□□□ -0.95
SMAD3-212ENST00000559937 L2HGDHQ9H9P8 463 aa9.14□□□□□ -0.95
SMAD3-212ENST00000559937 SAMSN1Q9NSI8 373 aaKnown RBP9.14□□□□□ -0.95
SMAD3-212ENST00000559937 TRMT1Q9NXH9 659 aaKnown RBP9.14□□□□□ -0.95
SMAD3-212ENST00000559937 ADD3Q9UEY8 706 aaKnown RBP9.14□□□□□ -0.95
SMAD3-212ENST00000559937 LRRC10BA6NIK2 292 aa9.13□□□□□ -0.95
SMAD3-212ENST00000559937 AKR1B15C9JRZ8 316 aaPredicted RBP9.13□□□□□ -0.95
SMAD3-212ENST00000559937 H7C1D1 291 aa9.13□□□□□ -0.95
SMAD3-212ENST00000559937 ADAMTS3O15072 1205 aa9.13□□□□□ -0.95
SMAD3-212ENST00000559937 NPM3O75607 178 aaKnown RBP9.13□□□□□ -0.95
SMAD3-212ENST00000559937 FECHP22830 423 aa9.13□□□□□ -0.95
SMAD3-212ENST00000559937 UBA7P41226 1012 aa9.13□□□□□ -0.95
SMAD3-212ENST00000559937 ETF1P62495 437 aaKnown RBP9.13□□□□□ -0.95
SMAD3-212ENST00000559937 GTF2IP78347 998 aa9.13□□□□□ -0.95
SMAD3-212ENST00000559937 HDLBPQ00341 1268 aaKnown RBP9.13□□□□□ -0.95
SMAD3-212ENST00000559937 PAK1Q13153 545 aa9.13□□□□□ -0.95
SMAD3-212ENST00000559937 STIM1Q13586 685 aa9.13□□□□□ -0.95
SMAD3-212ENST00000559937 INF2Q27J81 1249 aa9.13□□□□□ -0.95
SMAD3-212ENST00000559937 SLC4A8Q2Y0W8 1093 aa9.13□□□□□ -0.95
SMAD3-212ENST00000559937 COBLL1Q53SF7 1204 aa9.13□□□□□ -0.95
SMAD3-212ENST00000559937 RRAGBQ5VZM2 374 aa9.13□□□□□ -0.95
SMAD3-212ENST00000559937 REXO1L1PQ8IX06 675 aa9.13□□□□□ -0.95
SMAD3-212ENST00000559937 TC2NQ8N9U0 490 aa9.13□□□□□ -0.95
SMAD3-212ENST00000559937 NOC3LQ8WTT2 800 aaKnown RBP9.13□□□□□ -0.95
SMAD3-212ENST00000559937 AKT1S1Q96B36 256 aa9.13□□□□□ -0.95
SMAD3-212ENST00000559937 CCDC17Q96LX7 622 aa9.13□□□□□ -0.95
SMAD3-212ENST00000559937 BAG1Q99933 345 aaPredicted RBP9.13□□□□□ -0.95
SMAD3-212ENST00000559937 SRRTQ9BXP5 876 aaKnown RBP9.13□□□□□ -0.95
SMAD3-212ENST00000559937 TMX4Q9H1E5 349 aaPredicted RBP9.13□□□□□ -0.95
SMAD3-212ENST00000559937 KBTBD4Q9NVX7 518 aa9.13□□□□□ -0.95
SMAD3-212ENST00000559937 MTMR4Q9NYA4 1195 aa9.13□□□□□ -0.95
SMAD3-212ENST00000559937 SCN9AQ15858 1988 aa9.13□□□□□ -0.95
SMAD3-212ENST00000559937 COL2A1P02458 1487 aaPredicted RBP9.13□□□□□ -0.95
SMAD3-212ENST00000559937 SMCO2A6NFE2 343 aa9.12□□□□□ -0.95
SMAD3-212ENST00000559937 SLC26A4O43511 780 aa9.12□□□□□ -0.95
SMAD3-212ENST00000559937 RHOBTB3O94955 611 aa9.12□□□□□ -0.95
SMAD3-212ENST00000559937 SLU7O95391 586 aaKnown RBP9.12□□□□□ -0.95
SMAD3-212ENST00000559937 HLA-DOAP06340 250 aa9.12□□□□□ -0.95
SMAD3-212ENST00000559937 TPM1P09493 284 aa9.12□□□□□ -0.95
SMAD3-212ENST00000559937 PDHBP11177 359 aa9.12□□□□□ -0.95
SMAD3-212ENST00000559937 NCBP1Q09161 790 aaKnown RBP9.12□□□□□ -0.95
SMAD3-212ENST00000559937 NAALADL2Q58DX5 795 aa9.12□□□□□ -0.95
SMAD3-212ENST00000559937 GPATCH4Q5T3I0 446 aaKnown RBP9.12□□□□□ -0.95
SMAD3-212ENST00000559937 DPP8Q6V1X1 898 aaPredicted RBP9.12□□□□□ -0.95
SMAD3-212ENST00000559937 PPFIBP1Q86W92 1011 aa9.12□□□□□ -0.95
SMAD3-212ENST00000559937 REXO1Q8N1G1 1221 aaKnown RBP9.12□□□□□ -0.95
SMAD3-212ENST00000559937 PDCL2Q8N4E4 241 aa9.12□□□□□ -0.95
SMAD3-212ENST00000559937 RASGRP4Q8TDF6 673 aa9.12□□□□□ -0.95
SMAD3-212ENST00000559937 ZNF592Q92610 1267 aa9.12□□□□□ -0.95
SMAD3-212ENST00000559937 MASTLQ96GX5 879 aa9.12□□□□□ -0.95
SMAD3-212ENST00000559937 MTRQ99707 1265 aa9.12□□□□□ -0.95
SMAD3-212ENST00000559937 NAP1L4Q99733 375 aaKnown RBP9.12□□□□□ -0.95
SMAD3-212ENST00000559937 GLT8D2Q9H1C3 349 aa9.12□□□□□ -0.95
SMAD3-212ENST00000559937 TMEM60Q9H2L4 133 aa9.12□□□□□ -0.95
SMAD3-212ENST00000559937 CGNQ9P2M7 1197 aaKnown RBP9.12□□□□□ -0.95
SMAD3-212ENST00000559937 SERPINB13Q9UIV8 391 aa9.12□□□□□ -0.95
SMAD3-212ENST00000559937 CTNND2Q9UQB3 1225 aa9.12□□□□□ -0.95
SMAD3-212ENST00000559937 PPP2R2CQ9Y2T4 447 aa9.12□□□□□ -0.95
SMAD3-212ENST00000559937 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.12□□□□□ -0.95
SMAD3-212ENST00000559937 SLX4Q8IY92 1834 aa9.12□□□□□ -0.95
SMAD3-212ENST00000559937 KLRC4O43908 158 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 TTLL1O95922 423 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 EEF1GP26641 437 aaKnown RBP9.11□□□□□ -0.95
SMAD3-212ENST00000559937 ADCY7P51828 1080 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 AMPD3Q01432 767 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 KARSQ15046 597 aaKnown RBP9.11□□□□□ -0.95
SMAD3-212ENST00000559937 CCDC93Q567U6 631 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 STYK1Q6J9G0 422 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 KLHL10Q6JEL2 608 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 TRIM65Q6PJ69 517 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 USP17L2Q6R6M4 530 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 PODNQ7Z5L7 613 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 CABP7Q86V35 215 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 CNGA4Q8IV77 575 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 ADSSL1Q8N142 457 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 CERS5Q8N5B7 392 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 NELFBQ8WX92 580 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 TEKT1Q969V4 418 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 PIGSQ96S52 555 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 C7orf25Q9BPX7 421 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 CCDC94Q9BW85 323 aaPredicted RBP9.11□□□□□ -0.95
SMAD3-212ENST00000559937 DHX36Q9H2U1 1008 aaKnown RBP9.11□□□□□ -0.95
SMAD3-212ENST00000559937 THAP9Q9H5L6 903 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 SPON1Q9HCB6 807 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 USP40Q9NVE5 1235 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 STK17AQ9UEE5 414 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 TTF2Q9UNY4 1162 aaKnown RBP9.11□□□□□ -0.95
SMAD3-212ENST00000559937 UTRNP46939 3433 aa9.11□□□□□ -0.95
SMAD3-212ENST00000559937 ATAD5Q96QE3 1844 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 PNMA6FA0A0J9YX94 578 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 USP17L5A8MUK1 530 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 PSMA7O14818 248 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 MFAP3LO75121 409 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms