RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 CENPFP49454 3210 aa22.78■■□□□ 1.24
SHF-205ENST00000559566 MTFR1Q15390 333 aa22.78■■□□□ 1.24
SHF-205ENST00000559566 NBPF11Q86T75 865 aa22.78■■□□□ 1.24
SHF-205ENST00000559566 ZNF654Q8IZM8 581 aa22.78■■□□□ 1.24
SHF-205ENST00000559566 SLAIN1Q8ND83 568 aa22.78■■□□□ 1.24
SHF-205ENST00000559566 PXYLP1Q8TE99 480 aa22.78■■□□□ 1.24
SHF-205ENST00000559566 HOMER2Q9NSB8 354 aa22.78■■□□□ 1.24
SHF-205ENST00000559566 IVNS1ABPQ9Y6Y0 642 aa22.78■■□□□ 1.24
SHF-205ENST00000559566 RGS2P41220 211 aa22.77■■□□□ 1.24
SHF-205ENST00000559566 LIFRP42702 1097 aa22.77■■□□□ 1.24
SHF-205ENST00000559566 MUM1L1Q5H9M0 696 aa22.77■■□□□ 1.24
SHF-205ENST00000559566 ADGRF4Q8IZF3 695 aa22.77■■□□□ 1.24
SHF-205ENST00000559566 NUP133Q8WUM0 1156 aa22.77■■□□□ 1.24
SHF-205ENST00000559566 MMP19Q99542 508 aa22.77■■□□□ 1.24
SHF-205ENST00000559566 APBA2Q99767 749 aa22.77■■□□□ 1.24
SHF-205ENST00000559566 WDR19Q8NEZ3 1342 aa22.77■■□□□ 1.24
SHF-205ENST00000559566 KLRF2D3W0D1 207 aa22.76■■□□□ 1.23
SHF-205ENST00000559566 INHAP05111 366 aa22.76■■□□□ 1.23
SHF-205ENST00000559566 ICAM1P05362 532 aa22.76■■□□□ 1.23
SHF-205ENST00000559566 PGK2P07205 417 aa22.76■■□□□ 1.23
SHF-205ENST00000559566 HOXC6P09630 235 aa22.76■■□□□ 1.23
SHF-205ENST00000559566 XRCC5P13010 732 aaKnown RBP22.76■■□□□ 1.23
SHF-205ENST00000559566 CATIPQ7Z7H3 387 aa22.76■■□□□ 1.23
SHF-205ENST00000559566 JMJD4Q9H9V9 463 aa22.76■■□□□ 1.23
SHF-205ENST00000559566 RNF146Q9NTX7 359 aa22.76■■□□□ 1.23
SHF-205ENST00000559566 BRPF3Q9ULD4 1205 aa22.76■■□□□ 1.23
SHF-205ENST00000559566 ZNF236Q9UL36 1845 aa22.75■■□□□ 1.23
SHF-205ENST00000559566 CYTH3O43739 400 aa22.75■■□□□ 1.23
SHF-205ENST00000559566 STRNO43815 780 aa22.75■■□□□ 1.23
SHF-205ENST00000559566 IGHA2P01877 340 aa22.75■■□□□ 1.23
SHF-205ENST00000559566 FCER1AP12319 257 aa22.75■■□□□ 1.23
SHF-205ENST00000559566 ALAS1P13196 640 aa22.75■■□□□ 1.23
SHF-205ENST00000559566 COPB2P35606 906 aa22.75■■□□□ 1.23
SHF-205ENST00000559566 SOX10P56693 466 aa22.75■■□□□ 1.23
SHF-205ENST00000559566 NFXL1Q6ZNB6 911 aa22.75■■□□□ 1.23
SHF-205ENST00000559566 SGMS1Q86VZ5 419 aa22.75■■□□□ 1.23
SHF-205ENST00000559566 ABRAQ8N0Z2 381 aa22.75■■□□□ 1.23
SHF-205ENST00000559566 VAT1LQ9HCJ6 419 aa22.75■■□□□ 1.23
SHF-205ENST00000559566 CCPG1Q9ULG6 757 aa22.75■■□□□ 1.23
SHF-205ENST00000559566 CCDC69A6NI79 296 aa22.74■■□□□ 1.23
SHF-205ENST00000559566 DDAH1O94760 285 aa22.74■■□□□ 1.23
SHF-205ENST00000559566 CASTP20810 708 aaKnown RBP22.74■■□□□ 1.23
SHF-205ENST00000559566 RPS6KB1P23443 525 aa22.74■■□□□ 1.23
SHF-205ENST00000559566 CDC37Q16543 378 aaPredicted RBP22.74■■□□□ 1.23
SHF-205ENST00000559566 BLOC1S2Q6QNY1 142 aa22.74■■□□□ 1.23
SHF-205ENST00000559566 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.74■■□□□ 1.23
SHF-205ENST00000559566 POTEFA5A3E0 1075 aa22.73■■□□□ 1.23
SHF-205ENST00000559566 DPP9Q86TI2 863 aa22.73■■□□□ 1.23
SHF-205ENST00000559566 CCDC144CPQ8IYA2 1237 aa22.73■■□□□ 1.23
SHF-205ENST00000559566 CHST13Q8NET6 341 aa22.73■■□□□ 1.23
SHF-205ENST00000559566 MTMR8Q96EF0 704 aa22.73■■□□□ 1.23
SHF-205ENST00000559566 TRERF1Q96PN7 1200 aa22.73■■□□□ 1.23
SHF-205ENST00000559566 UNC93B1Q9H1C4 597 aa22.73■■□□□ 1.23
SHF-205ENST00000559566 BIN2Q9UBW5 565 aaPredicted RBP22.73■■□□□ 1.23
SHF-205ENST00000559566 DNAJC25-GNG10A0A024R161 153 aa22.72■■□□□ 1.23
SHF-205ENST00000559566 PPP1R11O60927 126 aaPredicted RBP22.72■■□□□ 1.23
SHF-205ENST00000559566 PLEKHA8P1O95397 391 aa22.72■■□□□ 1.23
SHF-205ENST00000559566 HMGCRP04035 888 aa22.72■■□□□ 1.23
SHF-205ENST00000559566 HMGB1P09429 215 aaKnown RBP22.72■■□□□ 1.23
SHF-205ENST00000559566 KCTD2Q14681 263 aa22.72■■□□□ 1.23
SHF-205ENST00000559566 QRICH1Q2TAL8 776 aa22.72■■□□□ 1.23
SHF-205ENST00000559566 ZNF792Q3KQV3 632 aa22.72■■□□□ 1.23
SHF-205ENST00000559566 IFFO2Q5TF58 517 aa22.72■■□□□ 1.23
SHF-205ENST00000559566 APOA5Q6Q788 366 aa22.72■■□□□ 1.23
SHF-205ENST00000559566 Q6ZUG5 572 aa22.72■■□□□ 1.23
SHF-205ENST00000559566 TMTC2Q8N394 836 aa22.72■■□□□ 1.23
SHF-205ENST00000559566 CLEC4DQ8WXI8 215 aa22.72■■□□□ 1.23
SHF-205ENST00000559566 FGD4Q96M96 766 aa22.72■■□□□ 1.23
SHF-205ENST00000559566 ACAD9Q9H845 621 aa22.72■■□□□ 1.23
SHF-205ENST00000559566 ZSWIM6Q9HCJ5 1215 aa22.72■■□□□ 1.23
SHF-205ENST00000559566 A1CFQ9NQ94 594 aaKnown RBP22.72■■□□□ 1.23
SHF-205ENST00000559566 SLC12A7Q9Y666 1083 aa22.72■■□□□ 1.23
SHF-205ENST00000559566 NFIBO00712 420 aa22.71■■□□□ 1.23
SHF-205ENST00000559566 DHX16O60231 1041 aaKnown RBP22.71■■□□□ 1.23
SHF-205ENST00000559566 CCL5P13501 91 aa22.71■■□□□ 1.23
SHF-205ENST00000559566 TKFCQ3LXA3 575 aa22.71■■□□□ 1.23
SHF-205ENST00000559566 MAP3K21Q5TCX8 1036 aa22.71■■□□□ 1.23
SHF-205ENST00000559566 MICU3Q86XE3 530 aa22.71■■□□□ 1.23
SHF-205ENST00000559566 CMTR1Q8N1G2 835 aaKnown RBP22.71■■□□□ 1.23
SHF-205ENST00000559566 MAP3K14Q99558 947 aa22.71■■□□□ 1.23
SHF-205ENST00000559566 UPF3BQ9BZI7 483 aaKnown RBP22.71■■□□□ 1.23
SHF-205ENST00000559566 RIOX1Q9H6W3 641 aa22.71■■□□□ 1.23
SHF-205ENST00000559566 CYP2C19P33261 490 aa22.7■■□□□ 1.22
SHF-205ENST00000559566 CACNB2Q08289 660 aaPredicted RBP22.7■■□□□ 1.22
SHF-205ENST00000559566 APOBRQ0VD83 1088 aa22.7■■□□□ 1.22
SHF-205ENST00000559566 USH1GQ495M9 461 aa22.7■■□□□ 1.22
SHF-205ENST00000559566 SRBD1Q8N5C6 995 aaKnown RBP22.7■■□□□ 1.22
SHF-205ENST00000559566 MAML3Q96JK9 1138 aa22.7■■□□□ 1.22
SHF-205ENST00000559566 PURBQ96QR8 312 aaKnown RBP22.7■■□□□ 1.22
SHF-205ENST00000559566 PIGSQ96S52 555 aa22.7■■□□□ 1.22
SHF-205ENST00000559566 AGXT2Q9BYV1 514 aa22.7■■□□□ 1.22
SHF-205ENST00000559566 FBXO40Q9UH90 709 aa22.7■■□□□ 1.22
SHF-205ENST00000559566 KLF18A0A0U1RQI7 1052 aa22.69■■□□□ 1.22
SHF-205ENST00000559566 PSMA5P28066 241 aa22.69■■□□□ 1.22
SHF-205ENST00000559566 UBXN2AP68543 259 aa22.69■■□□□ 1.22
SHF-205ENST00000559566 CNTN2Q02246 1040 aa22.69■■□□□ 1.22
SHF-205ENST00000559566 RUFY3Q7L099 469 aa22.69■■□□□ 1.22
SHF-205ENST00000559566 BRF1Q92994 677 aa22.69■■□□□ 1.22
SHF-205ENST00000559566 TM6SF1Q9BZW5 370 aa22.69■■□□□ 1.22
SHF-205ENST00000559566 BRCA2P51587 3418 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms