RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 NEDD1Q8NHV4 660 aa15.6■□□□□ 0.09
TPM1-220ENST00000559556 PI4K2BQ8TCG2 481 aa15.6■□□□□ 0.09
TPM1-220ENST00000559556 ABHD16BQ9H3Z7 469 aa15.6■□□□□ 0.09
TPM1-220ENST00000559556 RAVER2Q9HCJ3 691 aaKnown RBP15.6■□□□□ 0.09
TPM1-220ENST00000559556 STARD7Q9NQZ5 370 aa15.6■□□□□ 0.09
TPM1-220ENST00000559556 ZHX1Q9UKY1 873 aaPredicted RBP15.6■□□□□ 0.09
TPM1-220ENST00000559556 TMEM265A0A087WTH1 108 aa15.59■□□□□ 0.09
TPM1-220ENST00000559556 MYADML2A6NDP7 307 aa15.59■□□□□ 0.09
TPM1-220ENST00000559556 FDX1P10109 184 aa15.59■□□□□ 0.09
TPM1-220ENST00000559556 RAG1P15918 1043 aa15.59■□□□□ 0.09
TPM1-220ENST00000559556 FPGSQ05932 587 aa15.59■□□□□ 0.09
TPM1-220ENST00000559556 PDE4BQ07343 736 aa15.59■□□□□ 0.09
TPM1-220ENST00000559556 FAAP100Q0VG06 881 aa15.59■□□□□ 0.09
TPM1-220ENST00000559556 ACVR2BQ13705 512 aa15.59■□□□□ 0.09
TPM1-220ENST00000559556 KCNA10Q16322 511 aa15.59■□□□□ 0.09
TPM1-220ENST00000559556 SEC62Q99442 399 aaKnown RBP15.59■□□□□ 0.09
TPM1-220ENST00000559556 CDX2Q99626 313 aaPredicted RBP15.59■□□□□ 0.09
TPM1-220ENST00000559556 NACAP1Q9BZK3 213 aa15.59■□□□□ 0.09
TPM1-220ENST00000559556 UPF3AQ9H1J1 476 aaKnown RBP15.59■□□□□ 0.09
TPM1-220ENST00000559556 TTYH1Q9H313 450 aaPredicted RBP15.59■□□□□ 0.09
TPM1-220ENST00000559556 SEMA6BQ9H3T3 888 aa15.59■□□□□ 0.09
TPM1-220ENST00000559556 TMEM39AQ9NV64 488 aa15.59■□□□□ 0.09
TPM1-220ENST00000559556 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.59■□□□□ 0.09
TPM1-220ENST00000559556 CTDP1Q9Y5B0 961 aaPredicted RBP15.59■□□□□ 0.09
TPM1-220ENST00000559556 MROH7Q68CQ1 1323 aa15.59■□□□□ 0.09
TPM1-220ENST00000559556 DCDC2CA8MYV0 355 aa15.58■□□□□ 0.08
TPM1-220ENST00000559556 ERC2O15083 957 aa15.58■□□□□ 0.08
TPM1-220ENST00000559556 TSPY3P0CV98 308 aa15.58■□□□□ 0.08
TPM1-220ENST00000559556 TSPY8P0CW00 308 aa15.58■□□□□ 0.08
TPM1-220ENST00000559556 BMP3P12645 472 aa15.58■□□□□ 0.08
TPM1-220ENST00000559556 STAT2P52630 851 aa15.58■□□□□ 0.08
TPM1-220ENST00000559556 EPHB4P54760 987 aa15.58■□□□□ 0.08
TPM1-220ENST00000559556 CCDC144BQ3MJ40 725 aa15.58■□□□□ 0.08
TPM1-220ENST00000559556 ZMYM1Q5SVZ6 1142 aa15.58■□□□□ 0.08
TPM1-220ENST00000559556 ARMCX2Q7L311 632 aa15.58■□□□□ 0.08
TPM1-220ENST00000559556 ANKRD35Q8N283 1001 aa15.58■□□□□ 0.08
TPM1-220ENST00000559556 RNPC3Q96LT9 517 aaKnown RBP15.58■□□□□ 0.08
TPM1-220ENST00000559556 KATNBL1Q9H079 304 aa15.58■□□□□ 0.08
TPM1-220ENST00000559556 NAPBQ9H115 298 aa15.58■□□□□ 0.08
TPM1-220ENST00000559556 TBX21Q9UL17 535 aa15.58■□□□□ 0.08
TPM1-220ENST00000559556 ELP1O95163 1332 aa15.58■□□□□ 0.08
TPM1-220ENST00000559556 TCF20Q9UGU0 1960 aaKnown RBP15.57■□□□□ 0.08
TPM1-220ENST00000559556 SLC4A3P48751 1232 aa15.57■□□□□ 0.08
TPM1-220ENST00000559556 GJA9P57773 515 aa15.57■□□□□ 0.08
TPM1-220ENST00000559556 PPARAQ07869 468 aa15.57■□□□□ 0.08
TPM1-220ENST00000559556 SLFN13Q68D06 897 aa15.57■□□□□ 0.08
TPM1-220ENST00000559556 FAM133AQ8N9E0 248 aa15.57■□□□□ 0.08
TPM1-220ENST00000559556 PCSK9Q8NBP7 692 aaKnown RBP15.57■□□□□ 0.08
TPM1-220ENST00000559556 GMCL1Q96IK5 515 aa15.57■□□□□ 0.08
TPM1-220ENST00000559556 GLT1D1Q96MS3 346 aa15.57■□□□□ 0.08
TPM1-220ENST00000559556 COL25A1Q9BXS0 654 aaPredicted RBP15.57■□□□□ 0.08
TPM1-220ENST00000559556 ACAD9Q9H845 621 aa15.57■□□□□ 0.08
TPM1-220ENST00000559556 BAZ2BQ9UIF8 2168 aaKnown RBP15.56■□□□□ 0.08
TPM1-220ENST00000559556 TMEM232C9JQI7 657 aa15.56■□□□□ 0.08
TPM1-220ENST00000559556 FOXP2O15409 715 aa15.56■□□□□ 0.08
TPM1-220ENST00000559556 ASGR1P07306 291 aa15.56■□□□□ 0.08
TPM1-220ENST00000559556 SLC3A2P08195 630 aaKnown RBP15.56■□□□□ 0.08
TPM1-220ENST00000559556 C6orf222P0C671 652 aaPredicted RBP15.56■□□□□ 0.08
TPM1-220ENST00000559556 CDK7P50613 346 aa15.56■□□□□ 0.08
TPM1-220ENST00000559556 NKX3-2P78367 333 aa15.56■□□□□ 0.08
TPM1-220ENST00000559556 IRX5P78411 483 aaPredicted RBP15.56■□□□□ 0.08
TPM1-220ENST00000559556 FAM160B2Q86V87 743 aa15.56■□□□□ 0.08
TPM1-220ENST00000559556 CCDC144CPQ8IYA2 1237 aa15.56■□□□□ 0.08
TPM1-220ENST00000559556 MAFAQ8NHW3 353 aaPredicted RBP15.56■□□□□ 0.08
TPM1-220ENST00000559556 OTUD7AQ8TE49 926 aaPredicted RBP15.56■□□□□ 0.08
TPM1-220ENST00000559556 FSD1Q9BTV5 496 aa15.56■□□□□ 0.08
TPM1-220ENST00000559556 SPC25Q9HBM1 224 aa15.56■□□□□ 0.08
TPM1-220ENST00000559556 HOMER2Q9NSB8 354 aa15.56■□□□□ 0.08
TPM1-220ENST00000559556 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.56■□□□□ 0.08
TPM1-220ENST00000559556 ZNF536O15090 1300 aa15.56■□□□□ 0.08
TPM1-220ENST00000559556 SALL3Q9BXA9 1300 aa15.56■□□□□ 0.08
TPM1-220ENST00000559556 KAT6AQ92794 2004 aa15.56■□□□□ 0.08
TPM1-220ENST00000559556 PRRC2BQ5JSZ5 2229 aaKnown RBP15.56■□□□□ 0.08
TPM1-220ENST00000559556 XIRP2A4UGR9 3374 aa15.55■□□□□ 0.08
TPM1-220ENST00000559556 PLA2G6O60733 806 aa15.55■□□□□ 0.08
TPM1-220ENST00000559556 TIMP1P01033 207 aa15.55■□□□□ 0.08
TPM1-220ENST00000559556 TFAP4Q01664 338 aa15.55■□□□□ 0.08
TPM1-220ENST00000559556 CNTN2Q02246 1040 aa15.55■□□□□ 0.08
TPM1-220ENST00000559556 PPP4R3BQ5MIZ7 849 aa15.55■□□□□ 0.08
TPM1-220ENST00000559556 CHURC1Q8WUH1 139 aa15.55■□□□□ 0.08
TPM1-220ENST00000559556 MYLIPQ8WY64 445 aa15.55■□□□□ 0.08
TPM1-220ENST00000559556 A1CFQ9NQ94 594 aaKnown RBP15.55■□□□□ 0.08
TPM1-220ENST00000559556 RNF146Q9NTX7 359 aa15.55■□□□□ 0.08
TPM1-220ENST00000559556 PCDHB15Q9Y5E8 787 aa15.55■□□□□ 0.08
TPM1-220ENST00000559556 A0A0U1RQG5 324 aaPredicted RBP15.54■□□□□ 0.08
TPM1-220ENST00000559556 CTAGE5O15320 804 aa15.54■□□□□ 0.08
TPM1-220ENST00000559556 MX1P20591 662 aa15.54■□□□□ 0.08
TPM1-220ENST00000559556 SLC1A4P43007 532 aa15.54■□□□□ 0.08
TPM1-220ENST00000559556 TKFCQ3LXA3 575 aa15.54■□□□□ 0.08
TPM1-220ENST00000559556 MFSD5Q6N075 450 aa15.54■□□□□ 0.08
TPM1-220ENST00000559556 STAG1Q8WVM7 1258 aa15.54■□□□□ 0.08
TPM1-220ENST00000559556 DOCK5Q9H7D0 1870 aa15.54■□□□□ 0.08
TPM1-220ENST00000559556 ASTN1O14525 1302 aa15.53■□□□□ 0.08
TPM1-220ENST00000559556 FOSL2P15408 326 aa15.53■□□□□ 0.08
TPM1-220ENST00000559556 DNAJB2P25686 324 aa15.53■□□□□ 0.08
TPM1-220ENST00000559556 IKQ13123 557 aaPredicted RBP15.53■□□□□ 0.08
TPM1-220ENST00000559556 GNASQ5JWF2 1037 aa15.53■□□□□ 0.08
TPM1-220ENST00000559556 FAM126BQ8IXS8 530 aa15.53■□□□□ 0.08
TPM1-220ENST00000559556 AGBL1Q96MI9 1066 aa15.53■□□□□ 0.08
TPM1-220ENST00000559556 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.53■□□□□ 0.088e-7■■■□□ 15.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms