RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 PARP1P09874 1014 aaKnown RBP5.11□□□□□ -1.59
SNX1-205ENST00000559339 ALAS1P13196 640 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 CYP2C19P33261 490 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 MCM5P33992 734 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 SLC16A2P36021 539 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 MRPL12P52815 198 aaKnown RBP5.11□□□□□ -1.59
SNX1-205ENST00000559339 PTH1RQ03431 593 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 ZNF543Q08ER8 600 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 TRAF1Q13077 416 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 KRT32Q14532 448 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 ASPRV1Q53RT3 343 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 SYDE2Q5VT97 1194 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 CCDC174Q6PII3 467 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 BTNL9Q6UXG8 535 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 NECAB2Q7Z6G3 386 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 CATIPQ7Z7H3 387 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 TMTC2Q8N394 836 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 ENAHQ8N8S7 591 aaPredicted RBP5.11□□□□□ -1.59
SNX1-205ENST00000559339 REPS2Q8NFH8 660 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 NPLOC4Q8TAT6 608 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 ANKS1AQ92625 1134 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 DPF3Q92784 378 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 MAML3Q96JK9 1138 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 TRERF1Q96PN7 1200 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 MPHOSPH6Q99547 160 aaKnown RBP5.11□□□□□ -1.59
SNX1-205ENST00000559339 TINF2Q9BSI4 451 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 ESYT1Q9BSJ8 1104 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 CRISPLD2Q9H0B8 497 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 IL25Q9H293 177 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 GPCPD1Q9NPB8 672 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 DDX20Q9UHI6 824 aaKnown RBP5.11□□□□□ -1.59
SNX1-205ENST00000559339 NRBP1Q9UHY1 535 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 RBM8AQ9Y5S9 174 aaKnown RBP5.11□□□□□ -1.59
SNX1-205ENST00000559339 TACC3Q9Y6A5 838 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 PFASO15067 1338 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 PTPDC1A2A3K4 754 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 POTEB2H3BUK9 544 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 SEPT4O43236 478 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 EVI5O60447 810 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 EIF5BO60841 1220 aaKnown RBP5.1□□□□□ -1.59
SNX1-205ENST00000559339 HMGB1P09429 215 aaKnown RBP5.1□□□□□ -1.59
SNX1-205ENST00000559339 GOLGA8HP0CJ92 632 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 SNHG28P0DPA3 235 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 RARBP10826 455 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 CCND3P30281 292 aaPredicted RBP5.1□□□□□ -1.59
SNX1-205ENST00000559339 KIF5BP33176 963 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 FGD1P98174 961 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 TRIM32Q13049 653 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 WTAPQ15007 396 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 ZNF792Q3KQV3 632 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 TMEM67Q5HYA8 995 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 PRPF38BQ5VTL8 546 aaKnown RBP5.1□□□□□ -1.59
SNX1-205ENST00000559339 TTBK2Q6IQ55 1244 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 NSMFQ6X4W1 530 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 SYNE3Q6ZMZ3 975 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 NFXL1Q6ZNB6 911 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 ZNF467Q7Z7K2 595 aaPredicted RBP5.1□□□□□ -1.59
SNX1-205ENST00000559339 MCF2L2Q86YR7 1114 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 IFNLR1Q8IU57 520 aaPredicted RBP5.1□□□□□ -1.59
SNX1-205ENST00000559339 ARRDC4Q8NCT1 418 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 TMEM87BQ96K49 555 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 AGBL1Q96MI9 1066 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 SYNGAP1Q96PV0 1343 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 MTA3Q9BTC8 594 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 LSG1Q9H089 658 aaKnown RBP5.1□□□□□ -1.59
SNX1-205ENST00000559339 RANBP17Q9H2T7 1088 aaKnown RBP5.1□□□□□ -1.59
SNX1-205ENST00000559339 ABHD16BQ9H3Z7 469 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 SPC25Q9HBM1 224 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 RNF146Q9NTX7 359 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 FLRT1Q9NZU1 646 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 ADD3Q9UEY8 706 aaKnown RBP5.1□□□□□ -1.59
SNX1-205ENST00000559339 OGDHLQ9ULD0 1010 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 RIPK3Q9Y572 518 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 NR2E3Q9Y5X4 410 aa5.1□□□□□ -1.59
SNX1-205ENST00000559339 MYH8P13535 1937 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 ZNF536O15090 1300 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 WDR19Q8NEZ3 1342 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 DNAJC25-GNG10A0A024R161 153 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 CCDC69A6NI79 296 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 ASB14A6NK59 587 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 KBTBD13C9JR72 458 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 KLRF2D3W0D1 207 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 DNM1LO00429 736 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 SLC27A2O14975 620 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 CALM1P0DP23 149 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 CALM2P0DP24 149 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 CALM3P0DP25 149 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 CYBAP13498 195 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 AKR1A1P14550 325 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 GNAQP50148 359 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 SNAP25P60880 206 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 NECTIN1Q15223 517 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 CDC37Q16543 378 aaPredicted RBP5.09□□□□□ -1.59
SNX1-205ENST00000559339 USH1GQ495M9 461 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 CREB3L3Q68CJ9 461 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 LHX8Q68G74 356 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 MAMDC4Q6UXC1 1216 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 RNF207Q6ZRF8 634 aa5.09□□□□□ -1.59
SNX1-205ENST00000559339 NOL8Q76FK4 1167 aaKnown RBP5.09□□□□□ -1.59
SNX1-205ENST00000559339 CYB5R4Q7L1T6 521 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms