RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 NYAP2Q9P242 653 aa10.35□□□□□ -0.75
CLPX-205ENST00000559218 ARPP21Q9UBL0 812 aaPredicted RBP10.35□□□□□ -0.75
CLPX-205ENST00000559218 CLIP2Q9UDT6 1046 aa10.35□□□□□ -0.75
CLPX-205ENST00000559218 TBX21Q9UL17 535 aa10.35□□□□□ -0.75
CLPX-205ENST00000559218 FAM184BQ9ULE4 1060 aa10.35□□□□□ -0.75
CLPX-205ENST00000559218 ZNFX1Q9P2E3 1918 aaKnown RBP10.35□□□□□ -0.75
CLPX-205ENST00000559218 NCOR1O75376 2440 aa10.34□□□□□ -0.75
CLPX-205ENST00000559218 TMEM265A0A087WTH1 108 aa10.34□□□□□ -0.75
CLPX-205ENST00000559218 IGKV6D-41A0A0C4DH26 115 aa10.34□□□□□ -0.75
CLPX-205ENST00000559218 MOXD2PA6NHM9 499 aa10.34□□□□□ -0.75
CLPX-205ENST00000559218 DUSP11O75319 330 aaKnown RBP10.34□□□□□ -0.75
CLPX-205ENST00000559218 PRDM1O75626 825 aa10.34□□□□□ -0.75
CLPX-205ENST00000559218 TIMP1P01033 207 aa10.34□□□□□ -0.75
CLPX-205ENST00000559218 DNAJB2P25686 324 aa10.34□□□□□ -0.75
CLPX-205ENST00000559218 ACVR2BQ13705 512 aa10.34□□□□□ -0.75
CLPX-205ENST00000559218 CCDC144BQ3MJ40 725 aa10.34□□□□□ -0.75
CLPX-205ENST00000559218 ZSCAN25Q6NSZ9 544 aa10.34□□□□□ -0.75
CLPX-205ENST00000559218 PRPF38AQ8NAV1 312 aaKnown RBP10.34□□□□□ -0.75
CLPX-205ENST00000559218 NUP133Q8WUM0 1156 aa10.34□□□□□ -0.75
CLPX-205ENST00000559218 OSBP2Q969R2 916 aa10.34□□□□□ -0.75
CLPX-205ENST00000559218 KIFC2Q96AC6 838 aa10.34□□□□□ -0.75
CLPX-205ENST00000559218 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.34□□□□□ -0.75
CLPX-205ENST00000559218 LRRCC1Q9C099 1032 aa10.34□□□□□ -0.75
CLPX-205ENST00000559218 MKNK2Q9HBH9 465 aa10.34□□□□□ -0.75
CLPX-205ENST00000559218 SLC38A10Q9HBR0 1119 aa10.34□□□□□ -0.75
CLPX-205ENST00000559218 EPB41L4AQ9HCS5 686 aaPredicted RBP10.34□□□□□ -0.75
CLPX-205ENST00000559218 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.34□□□□□ -0.75
CLPX-205ENST00000559218 MYH8P13535 1937 aa10.33□□□□□ -0.76
CLPX-205ENST00000559218 TRANK1O15050 2925 aa10.33□□□□□ -0.76
CLPX-205ENST00000559218 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.33□□□□□ -0.76
CLPX-205ENST00000559218 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.33□□□□□ -0.76
CLPX-205ENST00000559218 GRXCR1A8MXD5 290 aa10.33□□□□□ -0.76
CLPX-205ENST00000559218 ATP2A1O14983 1001 aa10.33□□□□□ -0.76
CLPX-205ENST00000559218 ZBED4O75132 1171 aa10.33□□□□□ -0.76
CLPX-205ENST00000559218 ASGR1P07306 291 aa10.33□□□□□ -0.76
CLPX-205ENST00000559218 C6orf222P0C671 652 aaPredicted RBP10.33□□□□□ -0.76
CLPX-205ENST00000559218 CST5P28325 142 aaPredicted RBP10.33□□□□□ -0.76
CLPX-205ENST00000559218 PBX2P40425 430 aa10.33□□□□□ -0.76
CLPX-205ENST00000559218 CDK7P50613 346 aa10.33□□□□□ -0.76
CLPX-205ENST00000559218 C20orf194Q5TEA3 1177 aa10.33□□□□□ -0.76
CLPX-205ENST00000559218 MFSD5Q6N075 450 aa10.33□□□□□ -0.76
CLPX-205ENST00000559218 ZNF467Q7Z7K2 595 aaPredicted RBP10.33□□□□□ -0.76
CLPX-205ENST00000559218 LRRC47Q8N1G4 583 aaKnown RBP10.33□□□□□ -0.76
CLPX-205ENST00000559218 TIFAQ96CG3 184 aa10.33□□□□□ -0.76
CLPX-205ENST00000559218 CEP95Q96GE4 821 aa10.33□□□□□ -0.76
CLPX-205ENST00000559218 UPF3AQ9H1J1 476 aaKnown RBP10.33□□□□□ -0.76
CLPX-205ENST00000559218 ZNF576Q9H609 170 aa10.33□□□□□ -0.76
CLPX-205ENST00000559218 HOMER2Q9NSB8 354 aa10.33□□□□□ -0.76
CLPX-205ENST00000559218 ECHDC1Q9NTX5 307 aa10.33□□□□□ -0.76
CLPX-205ENST00000559218 TRPC6Q9Y210 931 aa10.33□□□□□ -0.76
CLPX-205ENST00000559218 DDX49Q9Y6V7 483 aaKnown RBP10.33□□□□□ -0.76
CLPX-205ENST00000559218 REV3LO60673 3130 aa10.33□□□□□ -0.76
CLPX-205ENST00000559218 ELP1O95163 1332 aa10.33□□□□□ -0.76
CLPX-205ENST00000559218 PLXNA1Q9UIW2 1896 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 XIRP2A4UGR9 3374 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 M0R2C6 588 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 CTAGE5O15320 804 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 RNF113AO15541 343 aaKnown RBP10.32□□□□□ -0.76
CLPX-205ENST00000559218 ACRP10323 421 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 CSF2RAP15509 400 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 PTGS1P23219 599 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 GJA9P57773 515 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 CNTN2Q02246 1040 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 GNASQ5JWF2 1037 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 TMEM240Q5SV17 173 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 RASIP1Q5U651 963 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 GIMAP6Q6P9H5 292 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.32□□□□□ -0.76
CLPX-205ENST00000559218 ARMCX2Q7L311 632 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 CCDC144CPQ8IYA2 1237 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 ANKRD35Q8N283 1001 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 KBTBD3Q8NAB2 608 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 MKL1Q969V6 931 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 VTI1AQ96AJ9 217 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 CHMP4CQ96CF2 233 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 GLT1D1Q96MS3 346 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 KATNBL1Q9H079 304 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 ABHD16BQ9H3Z7 469 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 PRDM6Q9NQX0 595 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 MTMR4Q9NYA4 1195 aa10.32□□□□□ -0.76
CLPX-205ENST00000559218 CTDP1Q9Y5B0 961 aaPredicted RBP10.32□□□□□ -0.76
CLPX-205ENST00000559218 GREB1LQ9C091 1923 aaPredicted RBP10.32□□□□□ -0.76
CLPX-205ENST00000559218 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.31□□□□□ -0.76
CLPX-205ENST00000559218 ARVCFO00192 962 aa10.31□□□□□ -0.76
CLPX-205ENST00000559218 GPAA1O43292 621 aa10.31□□□□□ -0.76
CLPX-205ENST00000559218 CYP2C18P33260 490 aa10.31□□□□□ -0.76
CLPX-205ENST00000559218 TDO2P48775 406 aa10.31□□□□□ -0.76
CLPX-205ENST00000559218 BEX3Q00994 111 aa10.31□□□□□ -0.76
CLPX-205ENST00000559218 ZNF365Q70YC5 407 aa10.31□□□□□ -0.76
CLPX-205ENST00000559218 FAM126BQ8IXS8 530 aa10.31□□□□□ -0.76
CLPX-205ENST00000559218 ZNF444Q8N0Y2 327 aaPredicted RBP10.31□□□□□ -0.76
CLPX-205ENST00000559218 PCSK9Q8NBP7 692 aaKnown RBP10.31□□□□□ -0.76
CLPX-205ENST00000559218 CHST13Q8NET6 341 aa10.31□□□□□ -0.76
CLPX-205ENST00000559218 APPBP2Q92624 585 aa10.31□□□□□ -0.76
CLPX-205ENST00000559218 PBX4Q9BYU1 374 aa10.31□□□□□ -0.76
CLPX-205ENST00000559218 PPP1R12CQ9BZL4 782 aa10.31□□□□□ -0.76
CLPX-205ENST00000559218 FEM1BQ9UK73 627 aa10.31□□□□□ -0.76
CLPX-205ENST00000559218 ASTN1O14525 1302 aa10.31□□□□□ -0.76
CLPX-205ENST00000559218 A0A0U1RQG5 324 aaPredicted RBP10.3□□□□□ -0.76
CLPX-205ENST00000559218 SOWAHBA6NEL2 793 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms