RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 CNGA1P29973 690 aa14.18□□□□□ -0.14
TPM1-216ENST00000558910 MAP2K5Q13163 448 aa14.18□□□□□ -0.14
TPM1-216ENST00000558910 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.18□□□□□ -0.14
TPM1-216ENST00000558910 RAVER2Q9HCJ3 691 aaKnown RBP14.18□□□□□ -0.14
TPM1-216ENST00000558910 HOMER2Q9NSB8 354 aa14.18□□□□□ -0.14
TPM1-216ENST00000558910 ANAPC4Q9UJX5 808 aa14.18□□□□□ -0.14
TPM1-216ENST00000558910 FRMPD2Q68DX3 1309 aaPredicted RBP14.17□□□□□ -0.14
TPM1-216ENST00000558910 SLC15A5A6NIM6 579 aa14.17□□□□□ -0.14
TPM1-216ENST00000558910 ZBED4O75132 1171 aa14.17□□□□□ -0.14
TPM1-216ENST00000558910 PGK2P07205 417 aa14.17□□□□□ -0.14
TPM1-216ENST00000558910 GJB1P08034 283 aa14.17□□□□□ -0.14
TPM1-216ENST00000558910 TAL1P17542 331 aaPredicted RBP14.17□□□□□ -0.14
TPM1-216ENST00000558910 CCND3P30281 292 aaPredicted RBP14.17□□□□□ -0.14
TPM1-216ENST00000558910 CYP2C19P33261 490 aa14.17□□□□□ -0.14
TPM1-216ENST00000558910 STAT3P40763 770 aa14.17□□□□□ -0.14
TPM1-216ENST00000558910 SLC1A4P43007 532 aa14.17□□□□□ -0.14
TPM1-216ENST00000558910 CACNB2Q08289 660 aaPredicted RBP14.17□□□□□ -0.14
TPM1-216ENST00000558910 AKNAD1Q5T1N1 836 aa14.17□□□□□ -0.14
TPM1-216ENST00000558910 SNRNP48Q6IEG0 339 aaKnown RBP14.17□□□□□ -0.14
TPM1-216ENST00000558910 CCDC174Q6PII3 467 aa14.17□□□□□ -0.14
TPM1-216ENST00000558910 KCNK17Q96T54 332 aa14.17□□□□□ -0.14
TPM1-216ENST00000558910 APBA2Q99767 749 aa14.17□□□□□ -0.14
TPM1-216ENST00000558910 HMX1Q9NP08 348 aaPredicted RBP14.17□□□□□ -0.14
TPM1-216ENST00000558910 GPCPD1Q9NPB8 672 aa14.17□□□□□ -0.14
TPM1-216ENST00000558910 WDR70Q9NW82 654 aa14.17□□□□□ -0.14
TPM1-216ENST00000558910 ORC4O43929 436 aa14.16□□□□□ -0.14
TPM1-216ENST00000558910 COBLO75128 1261 aa14.16□□□□□ -0.14
TPM1-216ENST00000558910 NEFLP07196 543 aa14.16□□□□□ -0.14
TPM1-216ENST00000558910 CHMLP26374 656 aa14.16□□□□□ -0.14
TPM1-216ENST00000558910 SLC16A2P36021 539 aa14.16□□□□□ -0.14
TPM1-216ENST00000558910 ANO1Q5XXA6 986 aa14.16□□□□□ -0.14
TPM1-216ENST00000558910 MB21D1Q8N884 522 aa14.16□□□□□ -0.14
TPM1-216ENST00000558910 CCDC136Q96JN2 1154 aa14.16□□□□□ -0.14
TPM1-216ENST00000558910 MMP19Q99542 508 aa14.16□□□□□ -0.14
TPM1-216ENST00000558910 MYH4Q9Y623 1939 aa14.15□□□□□ -0.14
TPM1-216ENST00000558910 B4E1Z4 1266 aa14.15□□□□□ -0.14
TPM1-216ENST00000558910 KDM4AO75164 1064 aa14.15□□□□□ -0.14
TPM1-216ENST00000558910 FARP2O94887 1054 aaPredicted RBP14.15□□□□□ -0.14
TPM1-216ENST00000558910 SGPL1O95470 568 aa14.15□□□□□ -0.14
TPM1-216ENST00000558910 FCER1AP12319 257 aa14.15□□□□□ -0.14
TPM1-216ENST00000558910 GJA8P48165 433 aa14.15□□□□□ -0.14
TPM1-216ENST00000558910 PTH1RQ03431 593 aa14.15□□□□□ -0.14
TPM1-216ENST00000558910 GRB14Q14449 540 aa14.15□□□□□ -0.14
TPM1-216ENST00000558910 E2F4Q16254 413 aa14.15□□□□□ -0.14
TPM1-216ENST00000558910 IMMTQ16891 758 aaKnown RBP14.15□□□□□ -0.14
TPM1-216ENST00000558910 PRAMEF19Q5SWL8 479 aa14.15□□□□□ -0.14
TPM1-216ENST00000558910 MFSD14CQ5VZR4 134 aa14.15□□□□□ -0.14
TPM1-216ENST00000558910 TTBK2Q6IQ55 1244 aa14.15□□□□□ -0.14
TPM1-216ENST00000558910 PRPF38AQ8NAV1 312 aaKnown RBP14.15□□□□□ -0.14
TPM1-216ENST00000558910 DIS3LQ8TF46 1054 aaKnown RBP14.15□□□□□ -0.14
TPM1-216ENST00000558910 USP6NLQ92738 828 aa14.15□□□□□ -0.14
TPM1-216ENST00000558910 DPF3Q92784 378 aa14.15□□□□□ -0.14
TPM1-216ENST00000558910 MKL1Q969V6 931 aa14.15□□□□□ -0.14
TPM1-216ENST00000558910 TMEM47Q9BQJ4 181 aa14.15□□□□□ -0.14
TPM1-216ENST00000558910 FEM1BQ9UK73 627 aa14.15□□□□□ -0.14
TPM1-216ENST00000558910 RIPK3Q9Y572 518 aa14.15□□□□□ -0.14
TPM1-216ENST00000558910 PDE4DIPQ5VU43 2346 aa14.15□□□□□ -0.14
TPM1-216ENST00000558910 PLXNB2O15031 1838 aa14.15□□□□□ -0.14
TPM1-216ENST00000558910 RPTORQ8N122 1335 aa14.15□□□□□ -0.15
TPM1-216ENST00000558910 PLIN4Q96Q06 1357 aa14.14□□□□□ -0.15
TPM1-216ENST00000558910 GREB1LQ9C091 1923 aaPredicted RBP14.14□□□□□ -0.15
TPM1-216ENST00000558910 KCTD2Q14681 263 aa14.14□□□□□ -0.15
TPM1-216ENST00000558910 CENPQQ7L2Z9 268 aaPredicted RBP14.14□□□□□ -0.15
TPM1-216ENST00000558910 GMCL1P1Q8NEA9 526 aa14.14□□□□□ -0.15
TPM1-216ENST00000558910 STAG1Q8WVM7 1258 aa14.14□□□□□ -0.15
TPM1-216ENST00000558910 RUFY2Q8WXA3 655 aa14.14□□□□□ -0.15
TPM1-216ENST00000558910 ESR2Q92731 530 aa14.14□□□□□ -0.15
TPM1-216ENST00000558910 DSCC1Q9BVC3 393 aa14.14□□□□□ -0.15
TPM1-216ENST00000558910 RNF41Q9H4P4 317 aaPredicted RBP14.14□□□□□ -0.15
TPM1-216ENST00000558910 MROH8Q9H579 483 aa14.14□□□□□ -0.15
TPM1-216ENST00000558910 SLC25A27O95847 323 aa14.13□□□□□ -0.15
TPM1-216ENST00000558910 GOLGA8HP0CJ92 632 aa14.13□□□□□ -0.15
TPM1-216ENST00000558910 XRCC5P13010 732 aaKnown RBP14.13□□□□□ -0.15
TPM1-216ENST00000558910 STAT2P52630 851 aa14.13□□□□□ -0.15
TPM1-216ENST00000558910 ADGRD1Q6QNK2 874 aa14.13□□□□□ -0.15
TPM1-216ENST00000558910 RIOX2Q8IUF8 465 aa14.13□□□□□ -0.15
TPM1-216ENST00000558910 SHCBP1Q8NEM2 672 aa14.13□□□□□ -0.15
TPM1-216ENST00000558910 REPS2Q8NFH8 660 aa14.13□□□□□ -0.15
TPM1-216ENST00000558910 ZDHHC16Q969W1 377 aa14.13□□□□□ -0.15
TPM1-216ENST00000558910 RNF166Q96A37 237 aaPredicted RBP14.13□□□□□ -0.15
TPM1-216ENST00000558910 DDX11Q96FC9 970 aa14.13□□□□□ -0.15
TPM1-216ENST00000558910 PAWRQ96IZ0 340 aaKnown RBP14.13□□□□□ -0.15
TPM1-216ENST00000558910 AGBL1Q96MI9 1066 aa14.13□□□□□ -0.15
TPM1-216ENST00000558910 ADAM33Q9BZ11 813 aa14.13□□□□□ -0.15
TPM1-216ENST00000558910 CPVLQ9H3G5 476 aa14.13□□□□□ -0.15
TPM1-216ENST00000558910 CTNNA3Q9UI47 895 aa14.13□□□□□ -0.15
TPM1-216ENST00000558910 ZNF214Q9UL59 606 aaPredicted RBP14.13□□□□□ -0.15
TPM1-216ENST00000558910 PCDHGA10Q9Y5H3 936 aa14.13□□□□□ -0.15
TPM1-216ENST00000558910 RLFQ13129 1914 aa14.13□□□□□ -0.15
TPM1-216ENST00000558910 ZMYM6O95789 1325 aa14.13□□□□□ -0.15
TPM1-216ENST00000558910 TOP1P11387 765 aaKnown RBP14.12□□□□□ -0.15
TPM1-216ENST00000558910 ALAS1P13196 640 aa14.12□□□□□ -0.15
TPM1-216ENST00000558910 RCSD1Q6JBY9 416 aa14.12□□□□□ -0.15
TPM1-216ENST00000558910 TICAM2Q86XR7 235 aa14.12□□□□□ -0.15
TPM1-216ENST00000558910 TRMT44Q8IYL2 757 aaKnown RBP14.12□□□□□ -0.15
TPM1-216ENST00000558910 CHURC1Q8WUH1 139 aa14.12□□□□□ -0.15
TPM1-216ENST00000558910 TEX13BQ9BXU2 312 aa14.12□□□□□ -0.15
TPM1-216ENST00000558910 PAK6Q9NQU5 681 aaPredicted RBP14.12□□□□□ -0.15
TPM1-216ENST00000558910 ADAMTS5Q9UNA0 930 aa14.12□□□□□ -0.15
TPM1-216ENST00000558910 TAF6LQ9Y6J9 622 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms