RNA–Protein interactions for RNA: ENST00000558859.5

CPNE6-209, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-209ENST00000558859 AGBL1Q96MI9 1066 aa17.35■□□□□ 0.37
CPNE6-209ENST00000558859 ASTN1O14525 1302 aa17.35■□□□□ 0.37
CPNE6-209ENST00000558859 SCN5AQ14524 2016 aa17.35■□□□□ 0.37
CPNE6-209ENST00000558859 TET1Q8NFU7 2136 aa17.35■□□□□ 0.37
CPNE6-209ENST00000558859 IPO8O15397 1037 aaKnown RBP17.34■□□□□ 0.37
CPNE6-209ENST00000558859 CABYRO75952 493 aa17.34■□□□□ 0.37
CPNE6-209ENST00000558859 CDK8P49336 464 aa17.34■□□□□ 0.37
CPNE6-209ENST00000558859 C12orf60Q5U649 245 aa17.34■□□□□ 0.37
CPNE6-209ENST00000558859 C16orf86Q6ZW13 317 aa17.34■□□□□ 0.37
CPNE6-209ENST00000558859 MICALL1Q8N3F8 863 aa17.34■□□□□ 0.37
CPNE6-209ENST00000558859 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.34■□□□□ 0.37
CPNE6-209ENST00000558859 GOPCQ9HD26 462 aa17.34■□□□□ 0.37
CPNE6-209ENST00000558859 GNEQ9Y223 722 aaKnown RBP17.34■□□□□ 0.37
CPNE6-209ENST00000558859 ZNF532Q9HCE3 1301 aa17.33■□□□□ 0.36
CPNE6-209ENST00000558859 EPOPA6NHQ4 379 aa17.33■□□□□ 0.36
CPNE6-209ENST00000558859 PI4K2BG5E9Z4 385 aa17.33■□□□□ 0.36
CPNE6-209ENST00000558859 RFXAPO00287 272 aa17.33■□□□□ 0.36
CPNE6-209ENST00000558859 CCL23P55773 120 aa17.33■□□□□ 0.36
CPNE6-209ENST00000558859 TTF1Q15361 905 aaPredicted RBP17.33■□□□□ 0.36
CPNE6-209ENST00000558859 SNRNP48Q6IEG0 339 aaKnown RBP17.33■□□□□ 0.36
CPNE6-209ENST00000558859 ARMCX2Q7L311 632 aa17.33■□□□□ 0.36
CPNE6-209ENST00000558859 RPUSD2Q8IZ73 545 aaKnown RBP17.33■□□□□ 0.36
CPNE6-209ENST00000558859 SLF1Q9BQI6 1058 aa17.33■□□□□ 0.36
CPNE6-209ENST00000558859 ATP8A2Q9NTI2 1148 aa17.33■□□□□ 0.36
CPNE6-209ENST00000558859 ATP2A2P16615 1042 aaKnown RBP17.32■□□□□ 0.36
CPNE6-209ENST00000558859 BEX3Q00994 111 aa17.32■□□□□ 0.36
CPNE6-209ENST00000558859 ITGA7Q13683 1181 aa17.32■□□□□ 0.36
CPNE6-209ENST00000558859 CXCL17Q6UXB2 119 aa17.32■□□□□ 0.36
CPNE6-209ENST00000558859 PRKAB2O43741 272 aa17.31■□□□□ 0.36
CPNE6-209ENST00000558859 GTPBP6O43824 516 aaPredicted RBP17.31■□□□□ 0.36
CPNE6-209ENST00000558859 B4GALT4O60513 344 aa17.31■□□□□ 0.36
CPNE6-209ENST00000558859 PFKMP08237 780 aa17.31■□□□□ 0.36
CPNE6-209ENST00000558859 TTLL4Q14679 1199 aa17.31■□□□□ 0.36
CPNE6-209ENST00000558859 SKIV2LQ15477 1246 aaKnown RBP17.31■□□□□ 0.36
CPNE6-209ENST00000558859 TMEM57Q8N5G2 664 aa17.31■□□□□ 0.36
CPNE6-209ENST00000558859 PRPF38AQ8NAV1 312 aaKnown RBP17.31■□□□□ 0.36
CPNE6-209ENST00000558859 TRPV6Q9H1D0 765 aa17.31■□□□□ 0.36
CPNE6-209ENST00000558859 CD320Q9NPF0 282 aa17.31■□□□□ 0.36
CPNE6-209ENST00000558859 ZNF318Q5VUA4 2279 aa17.31■□□□□ 0.36
CPNE6-209ENST00000558859 WDFY4Q6ZS81 3184 aa17.3■□□□□ 0.36
CPNE6-209ENST00000558859 ZBED9Q6R2W3 1325 aa17.3■□□□□ 0.36
CPNE6-209ENST00000558859 MYH4Q9Y623 1939 aa17.3■□□□□ 0.36
CPNE6-209ENST00000558859 CYP2D7A0A087X1C5 515 aa17.3■□□□□ 0.36
CPNE6-209ENST00000558859 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.3■□□□□ 0.36
CPNE6-209ENST00000558859 CA3P07451 260 aa17.3■□□□□ 0.36
CPNE6-209ENST00000558859 TMEM67Q5HYA8 995 aa17.3■□□□□ 0.36
CPNE6-209ENST00000558859 KRT40Q6A162 431 aa17.3■□□□□ 0.36
CPNE6-209ENST00000558859 ALYREFQ86V81 257 aaKnown RBP17.3■□□□□ 0.36
CPNE6-209ENST00000558859 CCDC144CPQ8IYA2 1237 aa17.3■□□□□ 0.36
CPNE6-209ENST00000558859 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.3■□□□□ 0.36
CPNE6-209ENST00000558859 HLA-CQ95604 372 aa17.3■□□□□ 0.36
CPNE6-209ENST00000558859 CLUAP1Q96AJ1 413 aa17.3■□□□□ 0.36
CPNE6-209ENST00000558859 SLC38A10Q9HBR0 1119 aa17.3■□□□□ 0.36
CPNE6-209ENST00000558859 LPXNO60711 386 aa17.29■□□□□ 0.36
CPNE6-209ENST00000558859 ARHGEF15O94989 841 aa17.29■□□□□ 0.36
CPNE6-209ENST00000558859 TNFAIP2Q03169 654 aa17.29■□□□□ 0.36
CPNE6-209ENST00000558859 FAM133AQ8N9E0 248 aa17.29■□□□□ 0.36
CPNE6-209ENST00000558859 CHST13Q8NET6 341 aa17.29■□□□□ 0.36
CPNE6-209ENST00000558859 SCLYQ96I15 445 aa17.29■□□□□ 0.36
CPNE6-209ENST00000558859 NUP88Q99567 741 aaPredicted RBP17.29■□□□□ 0.36
CPNE6-209ENST00000558859 ARMT1Q9H993 441 aa17.29■□□□□ 0.36
CPNE6-209ENST00000558859 FBXO40Q9UH90 709 aa17.29■□□□□ 0.36
CPNE6-209ENST00000558859 SCN10AQ9Y5Y9 1956 aa17.29■□□□□ 0.36
CPNE6-209ENST00000558859 PTPRSQ13332 1948 aa17.29■□□□□ 0.36
CPNE6-209ENST00000558859 MYH7P12883 1935 aa17.28■□□□□ 0.36
CPNE6-209ENST00000558859 FAM86C2PA6NEL3 165 aa17.28■□□□□ 0.36
CPNE6-209ENST00000558859 USP17L12C9JPN9 530 aa17.28■□□□□ 0.36
CPNE6-209ENST00000558859 USP17L21D6R901 530 aa17.28■□□□□ 0.36
CPNE6-209ENST00000558859 OAZ1P54368 228 aa17.28■□□□□ 0.36
CPNE6-209ENST00000558859 TAP1Q03518 808 aa17.28■□□□□ 0.36
CPNE6-209ENST00000558859 FSCN1Q16658 493 aaKnown RBP17.28■□□□□ 0.36
CPNE6-209ENST00000558859 AACSQ86V21 672 aa17.28■□□□□ 0.36
CPNE6-209ENST00000558859 PHOSPHO2Q8TCD6 241 aa17.28■□□□□ 0.36
CPNE6-209ENST00000558859 NYAP2Q9P242 653 aa17.28■□□□□ 0.36
CPNE6-209ENST00000558859 Q9Y3F1 56 aa17.28■□□□□ 0.36
CPNE6-209ENST00000558859 TRIP12Q14669 1992 aaPredicted RBP17.28■□□□□ 0.36
CPNE6-209ENST00000558859 F5H6K3 240 aa17.27■□□□□ 0.36
CPNE6-209ENST00000558859 NDUFB10O96000 172 aa17.27■□□□□ 0.36
CPNE6-209ENST00000558859 KLRC3Q07444 240 aa17.27■□□□□ 0.36
CPNE6-209ENST00000558859 TLK2Q86UE8 772 aa17.27■□□□□ 0.36
CPNE6-209ENST00000558859 ANKRD35Q8N283 1001 aa17.27■□□□□ 0.36
CPNE6-209ENST00000558859 ALDH8A1Q9H2A2 487 aaPredicted RBP17.27■□□□□ 0.36
CPNE6-209ENST00000558859 C1orf115Q9H7X2 142 aa17.27■□□□□ 0.36
CPNE6-209ENST00000558859 LCTP09848 1927 aa17.26■□□□□ 0.35
CPNE6-209ENST00000558859 ZBBXA8MT70 800 aa17.26■□□□□ 0.35
CPNE6-209ENST00000558859 PRR33A8MZF0 331 aa17.26■□□□□ 0.35
CPNE6-209ENST00000558859 SMPD1P17405 629 aa17.26■□□□□ 0.35
CPNE6-209ENST00000558859 ADD2P35612 726 aa17.26■□□□□ 0.35
CPNE6-209ENST00000558859 CNTN2Q02246 1040 aa17.26■□□□□ 0.35
CPNE6-209ENST00000558859 GRB10Q13322 594 aa17.26■□□□□ 0.35
CPNE6-209ENST00000558859 CPXCR1Q8N123 301 aa17.26■□□□□ 0.35
CPNE6-209ENST00000558859 SLC9A7Q96T83 725 aa17.26■□□□□ 0.35
CPNE6-209ENST00000558859 CERS4Q9HA82 394 aa17.26■□□□□ 0.35
CPNE6-209ENST00000558859 RAVER2Q9HCJ3 691 aaKnown RBP17.26■□□□□ 0.35
CPNE6-209ENST00000558859 COL4A4P53420 1690 aaPredicted RBP17.26■□□□□ 0.35
CPNE6-209ENST00000558859 TANC1Q9C0D5 1861 aa17.25■□□□□ 0.35
CPNE6-209ENST00000558859 GOLIM4O00461 696 aa17.25■□□□□ 0.35
CPNE6-209ENST00000558859 ZBED4O75132 1171 aa17.25■□□□□ 0.35
CPNE6-209ENST00000558859 MBD4O95243 580 aa17.25■□□□□ 0.35
CPNE6-209ENST00000558859 PTGS1P23219 599 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms