RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 TTC38Q5R3I4 469 aa14.81□□□□□ -0.04
SMAD3-207ENST00000558763 CCDC148Q8NFR7 591 aa14.81□□□□□ -0.04
SMAD3-207ENST00000558763 WRNIP1Q96S55 665 aa14.81□□□□□ -0.04
SMAD3-207ENST00000558763 PCDHA6Q9UN73 950 aa14.81□□□□□ -0.04
SMAD3-207ENST00000558763 PCDHA8Q9Y5H6 950 aa14.81□□□□□ -0.04
SMAD3-207ENST00000558763 ATAD5Q96QE3 1844 aa14.81□□□□□ -0.04
SMAD3-207ENST00000558763 PHF20L1A8MW92 1017 aa14.8□□□□□ -0.04
SMAD3-207ENST00000558763 EEF2P13639 858 aaKnown RBP14.8□□□□□ -0.04
SMAD3-207ENST00000558763 YY1P25490 414 aa14.8□□□□□ -0.04
SMAD3-207ENST00000558763 INPP5BP32019 993 aa14.8□□□□□ -0.04
SMAD3-207ENST00000558763 NF2P35240 595 aa14.8□□□□□ -0.04
SMAD3-207ENST00000558763 SYKP43405 635 aa14.8□□□□□ -0.04
SMAD3-207ENST00000558763 ATP2C1P98194 919 aaPredicted RBP14.8□□□□□ -0.04
SMAD3-207ENST00000558763 GALNT17Q6IS24 598 aa14.8□□□□□ -0.04
SMAD3-207ENST00000558763 MTMR8Q96EF0 704 aa14.8□□□□□ -0.04
SMAD3-207ENST00000558763 CEP131Q9UPN4 1083 aa14.8□□□□□ -0.04
SMAD3-207ENST00000558763 CAP2P40123 477 aa14.8□□□□□ -0.04
SMAD3-207ENST00000558763 TTBK2Q6IQ55 1244 aa14.8□□□□□ -0.04
SMAD3-207ENST00000558763 C11orf57Q6ZUT1 292 aaPredicted RBP14.8□□□□□ -0.04
SMAD3-207ENST00000558763 TMEM179Q6ZVK1 233 aa14.8□□□□□ -0.04
SMAD3-207ENST00000558763 USP49Q70CQ1 688 aa14.8□□□□□ -0.04
SMAD3-207ENST00000558763 HOMER1Q86YM7 354 aa14.8□□□□□ -0.04
SMAD3-207ENST00000558763 RRP36Q96EU6 259 aaKnown RBP14.8□□□□□ -0.04
SMAD3-207ENST00000558763 DNAJC25Q9H1X3 360 aa14.8□□□□□ -0.04
SMAD3-207ENST00000558763 KANSL2Q9H9L4 492 aa14.8□□□□□ -0.04
SMAD3-207ENST00000558763 JMJD4Q9H9V9 463 aa14.8□□□□□ -0.04
SMAD3-207ENST00000558763 CBX8Q9HC52 389 aa14.8□□□□□ -0.04
SMAD3-207ENST00000558763 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.8□□□□□ -0.04
SMAD3-207ENST00000558763 ZBTB21Q9ULJ3 1066 aa14.8□□□□□ -0.04
SMAD3-207ENST00000558763 NOL7Q9UMY1 257 aaKnown RBP14.8□□□□□ -0.04
SMAD3-207ENST00000558763 ESYT2A0FGR8 921 aa14.79□□□□□ -0.04
SMAD3-207ENST00000558763 PPP1R11O60927 126 aaPredicted RBP14.79□□□□□ -0.04
SMAD3-207ENST00000558763 ATP2B2Q01814 1243 aa14.79□□□□□ -0.04
SMAD3-207ENST00000558763 TTLL12Q14166 644 aaPredicted RBP14.79□□□□□ -0.04
SMAD3-207ENST00000558763 ZNF174Q15697 407 aa14.79□□□□□ -0.04
SMAD3-207ENST00000558763 CHADLQ6NUI6 762 aa14.79□□□□□ -0.04
SMAD3-207ENST00000558763 SASS6Q6UVJ0 657 aa14.79□□□□□ -0.04
SMAD3-207ENST00000558763 C4orf32Q8N8J7 132 aa14.79□□□□□ -0.04
SMAD3-207ENST00000558763 ZKSCAN4Q969J2 545 aaPredicted RBP14.79□□□□□ -0.04
SMAD3-207ENST00000558763 CSRNP2Q9H175 543 aa14.79□□□□□ -0.04
SMAD3-207ENST00000558763 GPCPD1Q9NPB8 672 aa14.79□□□□□ -0.04
SMAD3-207ENST00000558763 KIAA1468Q9P260 1216 aa14.79□□□□□ -0.04
SMAD3-207ENST00000558763 USP25Q9UHP3 1055 aa14.79□□□□□ -0.04
SMAD3-207ENST00000558763 KCNH3Q9ULD8 1083 aa14.79□□□□□ -0.04
SMAD3-207ENST00000558763 OTOFQ9HC10 1997 aa14.79□□□□□ -0.04
SMAD3-207ENST00000558763 KIF3CO14782 793 aa14.78□□□□□ -0.04
SMAD3-207ENST00000558763 PPP1R12BO60237 982 aaPredicted RBP14.78□□□□□ -0.04
SMAD3-207ENST00000558763 USP2O75604 605 aaPredicted RBP14.78□□□□□ -0.04
SMAD3-207ENST00000558763 BMP15O95972 392 aa14.78□□□□□ -0.04
SMAD3-207ENST00000558763 ICA1Q05084 483 aa14.78□□□□□ -0.04
SMAD3-207ENST00000558763 LONRF3Q496Y0 759 aa14.78□□□□□ -0.04
SMAD3-207ENST00000558763 PPP4R3BQ5MIZ7 849 aa14.78□□□□□ -0.04
SMAD3-207ENST00000558763 MOB2Q70IA6 237 aa14.78□□□□□ -0.04
SMAD3-207ENST00000558763 CCDC84Q86UT8 332 aaPredicted RBP14.78□□□□□ -0.04
SMAD3-207ENST00000558763 LUZP1Q86V48 1076 aa14.78□□□□□ -0.04
SMAD3-207ENST00000558763 KLRG1Q96E93 195 aa14.78□□□□□ -0.04
SMAD3-207ENST00000558763 DOCK1Q14185 1865 aa14.78□□□□□ -0.04
SMAD3-207ENST00000558763 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.78□□□□□ -0.04
SMAD3-207ENST00000558763 hCG_1984214I3L0E3 225 aa14.78□□□□□ -0.04
SMAD3-207ENST00000558763 NAPAP54920 295 aa14.78□□□□□ -0.04
SMAD3-207ENST00000558763 PTGDRQ13258 359 aa14.78□□□□□ -0.04
SMAD3-207ENST00000558763 IQCB1Q15051 598 aa14.78□□□□□ -0.04
SMAD3-207ENST00000558763 IL17AQ16552 155 aa14.78□□□□□ -0.04
SMAD3-207ENST00000558763 STX1AQ16623 288 aa14.78□□□□□ -0.04
SMAD3-207ENST00000558763 GPATCH4Q5T3I0 446 aaKnown RBP14.78□□□□□ -0.04
SMAD3-207ENST00000558763 KCTD1Q719H9 257 aa14.78□□□□□ -0.04
SMAD3-207ENST00000558763 ADGRF4Q8IZF3 695 aa14.78□□□□□ -0.04
SMAD3-207ENST00000558763 ZNF713Q8N859 430 aaPredicted RBP14.78□□□□□ -0.04
SMAD3-207ENST00000558763 SDF4Q9BRK5 362 aa14.78□□□□□ -0.04
SMAD3-207ENST00000558763 VAT1LQ9HCJ6 419 aa14.78□□□□□ -0.04
SMAD3-207ENST00000558763 A0A087X0B3 334 aa14.77□□□□□ -0.04
SMAD3-207ENST00000558763 CTNND1O60716 968 aaKnown RBP14.77□□□□□ -0.04
SMAD3-207ENST00000558763 ASNSP08243 561 aa14.77□□□□□ -0.04
SMAD3-207ENST00000558763 KRBA2Q6ZNG9 492 aa14.77□□□□□ -0.04
SMAD3-207ENST00000558763 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.77□□□□□ -0.04
SMAD3-207ENST00000558763 ANP32BQ92688 251 aaKnown RBP14.77□□□□□ -0.04
SMAD3-207ENST00000558763 SEC63Q9UGP8 760 aaKnown RBP14.77□□□□□ -0.04
SMAD3-207ENST00000558763 TUBE1Q9UJT0 475 aa14.77□□□□□ -0.04
SMAD3-207ENST00000558763 ZNF112Q9UJU3 913 aa14.77□□□□□ -0.04
SMAD3-207ENST00000558763 PAPPA2Q9BXP8 1791 aa14.77□□□□□ -0.05
SMAD3-207ENST00000558763 A0A1W2PRG0 241 aa14.76□□□□□ -0.05
SMAD3-207ENST00000558763 ZNF165P49910 485 aa14.76□□□□□ -0.05
SMAD3-207ENST00000558763 MDM2Q00987 491 aaPredicted RBP14.76□□□□□ -0.05
SMAD3-207ENST00000558763 ELOA2Q8IYF1 753 aaPredicted RBP14.76□□□□□ -0.05
SMAD3-207ENST00000558763 GMCL1P1Q8NEA9 526 aa14.76□□□□□ -0.05
SMAD3-207ENST00000558763 DCAF4Q8WV16 495 aa14.76□□□□□ -0.05
SMAD3-207ENST00000558763 FERMT2Q96AC1 680 aa14.76□□□□□ -0.05
SMAD3-207ENST00000558763 SMCO2A6NFE2 343 aa14.76□□□□□ -0.05
SMAD3-207ENST00000558763 ACTN4O43707 911 aaKnown RBP14.76□□□□□ -0.05
SMAD3-207ENST00000558763 CAVIN2O95810 425 aa14.76□□□□□ -0.05
SMAD3-207ENST00000558763 SLC16A2P36021 539 aa14.76□□□□□ -0.05
SMAD3-207ENST00000558763 IREB2P48200 963 aaKnown RBP14.76□□□□□ -0.05
SMAD3-207ENST00000558763 INF2Q27J81 1249 aa14.76□□□□□ -0.05
SMAD3-207ENST00000558763 SCYL3Q8IZE3 742 aa14.76□□□□□ -0.05
SMAD3-207ENST00000558763 ZNF784Q8NCA9 323 aaPredicted RBP14.76□□□□□ -0.05
SMAD3-207ENST00000558763 CCDC12Q8WUD4 166 aaPredicted RBP14.76□□□□□ -0.05
SMAD3-207ENST00000558763 MYH7BA7E2Y1 1941 aa14.75□□□□□ -0.05
SMAD3-207ENST00000558763 PNMA6FA0A0J9YX94 578 aa14.75□□□□□ -0.05
SMAD3-207ENST00000558763 CCDC194A0A1B0GVG4 234 aa14.75□□□□□ -0.05
SMAD3-207ENST00000558763 USP17L10C9JJH3 530 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms