RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 TRERF1Q96PN7 1200 aa12.58□□□□□ -0.4
MARK3-213ENST00000558611 N4BP2Q86UW6 1770 aaPredicted RBP12.58□□□□□ -0.4
MARK3-213ENST00000558611 FAM177BA6PVY3 158 aa12.57□□□□□ -0.4
MARK3-213ENST00000558611 KCNQ3O43525 872 aa12.57□□□□□ -0.4
MARK3-213ENST00000558611 GJB6O95452 261 aa12.57□□□□□ -0.4
MARK3-213ENST00000558611 TMPOP42166 694 aaKnown RBP12.57□□□□□ -0.4
MARK3-213ENST00000558611 RIPK4P57078 832 aa12.57□□□□□ -0.4
MARK3-213ENST00000558611 TBC1D8BQ0IIM8 1120 aa12.57□□□□□ -0.4
MARK3-213ENST00000558611 AP3B2Q13367 1082 aa12.57□□□□□ -0.4
MARK3-213ENST00000558611 TAF7Q15545 349 aaPredicted RBP12.57□□□□□ -0.4
MARK3-213ENST00000558611 LRRFIP1Q32MZ4 808 aaKnown RBP12.57□□□□□ -0.4
MARK3-213ENST00000558611 MTERF2Q49AM1 385 aa12.57□□□□□ -0.4
MARK3-213ENST00000558611 TRAPPC3LQ5T215 181 aa12.57□□□□□ -0.4
MARK3-213ENST00000558611 INTS5Q6P9B9 1019 aaKnown RBP12.57□□□□□ -0.4
MARK3-213ENST00000558611 ADAMTSL4Q6UY14 1074 aa12.57□□□□□ -0.4
MARK3-213ENST00000558611 C16orf86Q6ZW13 317 aa12.57□□□□□ -0.4
MARK3-213ENST00000558611 THAP3Q8WTV1 239 aaPredicted RBP12.57□□□□□ -0.4
MARK3-213ENST00000558611 CWC22Q9HCG8 908 aaKnown RBP12.57□□□□□ -0.4
MARK3-213ENST00000558611 AVENQ9NQS1 362 aaPredicted RBP12.57□□□□□ -0.4
MARK3-213ENST00000558611 CACNA2D2Q9NY47 1150 aa12.57□□□□□ -0.4
MARK3-213ENST00000558611 NUP98P52948 1817 aa12.57□□□□□ -0.4
MARK3-213ENST00000558611 GOLGB1Q14789 3259 aaKnown RBP12.57□□□□□ -0.4
MARK3-213ENST00000558611 NRXN2Q9P2S2 1712 aa12.57□□□□□ -0.4
MARK3-213ENST00000558611 COL15A1P39059 1388 aa12.56□□□□□ -0.4
MARK3-213ENST00000558611 MEIS3P2A8K0S8 358 aa12.56□□□□□ -0.4
MARK3-213ENST00000558611 MARCH6O60337 910 aa12.56□□□□□ -0.4
MARK3-213ENST00000558611 CPB1P15086 417 aa12.56□□□□□ -0.4
MARK3-213ENST00000558611 LMOD3Q0VAK6 560 aa12.56□□□□□ -0.4
MARK3-213ENST00000558611 SQSTM1Q13501 440 aa12.56□□□□□ -0.4
MARK3-213ENST00000558611 CCDC184Q52MB2 194 aa12.56□□□□□ -0.4
MARK3-213ENST00000558611 FOXR1Q6PIV2 292 aa12.56□□□□□ -0.4
MARK3-213ENST00000558611 ZNF669Q96BR6 464 aaPredicted RBP12.56□□□□□ -0.4
MARK3-213ENST00000558611 THUMPD2Q9BTF0 503 aaKnown RBP12.56□□□□□ -0.4
MARK3-213ENST00000558611 FRRS1LQ9P0K9 344 aa12.56□□□□□ -0.4
MARK3-213ENST00000558611 SLC6A14Q9UN76 642 aa12.56□□□□□ -0.4
MARK3-213ENST00000558611 SOS1Q07889 1333 aaPredicted RBP12.56□□□□□ -0.4
MARK3-213ENST00000558611 STARD3NLO95772 234 aa12.55□□□□□ -0.4
MARK3-213ENST00000558611 RFC4P35249 363 aa12.55□□□□□ -0.4
MARK3-213ENST00000558611 PTPN11Q06124 597 aaPredicted RBP12.55□□□□□ -0.4
MARK3-213ENST00000558611 IKBKEQ14164 716 aa12.55□□□□□ -0.4
MARK3-213ENST00000558611 PPP2R5EQ16537 467 aa12.55□□□□□ -0.4
MARK3-213ENST00000558611 CACTIN-AS1Q8N1I8 211 aa12.55□□□□□ -0.4
MARK3-213ENST00000558611 ST13P5Q8NFI4 369 aaPredicted RBP12.55□□□□□ -0.4
MARK3-213ENST00000558611 PNISRQ8TF01 805 aaKnown RBP12.55□□□□□ -0.4
MARK3-213ENST00000558611 FEZ1Q99689 392 aa12.55□□□□□ -0.4
MARK3-213ENST00000558611 TM9SF2Q99805 663 aa12.55□□□□□ -0.4
MARK3-213ENST00000558611 TEX13AQ9BXU3 409 aaPredicted RBP12.55□□□□□ -0.4
MARK3-213ENST00000558611 ZBTB1Q9Y2K1 713 aa12.55□□□□□ -0.4
MARK3-213ENST00000558611 RRP7AQ9Y3A4 280 aaKnown RBP12.55□□□□□ -0.4
MARK3-213ENST00000558611 DLEC1Q9Y238 1755 aa12.54□□□□□ -0.4
MARK3-213ENST00000558611 UTRNP46939 3433 aa12.54□□□□□ -0.4
MARK3-213ENST00000558611 A0A1W2PQH9 124 aa12.54□□□□□ -0.4
MARK3-213ENST00000558611 EIF4EBP3O60516 100 aaPredicted RBP12.54□□□□□ -0.4
MARK3-213ENST00000558611 GYS2P54840 703 aa12.54□□□□□ -0.4
MARK3-213ENST00000558611 PERM1Q5SV97 790 aa12.54□□□□□ -0.4
MARK3-213ENST00000558611 ELMSAN1Q6PJG2 1045 aa12.54□□□□□ -0.4
MARK3-213ENST00000558611 SOX17Q9H6I2 414 aaPredicted RBP12.54□□□□□ -0.4
MARK3-213ENST00000558611 USP42Q9H9J4 1324 aaKnown RBP12.54□□□□□ -0.4
MARK3-213ENST00000558611 DDAH1O94760 285 aa12.53□□□□□ -0.4
MARK3-213ENST00000558611 GSTP1P09211 210 aaKnown RBP12.53□□□□□ -0.4
MARK3-213ENST00000558611 GYS1P13807 737 aa12.53□□□□□ -0.4
MARK3-213ENST00000558611 TAB3Q8N5C8 712 aaPredicted RBP12.53□□□□□ -0.4
MARK3-213ENST00000558611 TTC9Q92623 222 aa12.53□□□□□ -0.4
MARK3-213ENST00000558611 SYT17Q9BSW7 474 aa12.53□□□□□ -0.4
MARK3-213ENST00000558611 SMG9Q9H0W8 520 aaKnown RBP12.53□□□□□ -0.4
MARK3-213ENST00000558611 MIS18AQ9NYP9 233 aa12.53□□□□□ -0.4
MARK3-213ENST00000558611 ANKRD36CQ5JPF3 1778 aa12.53□□□□□ -0.4
MARK3-213ENST00000558611 ANKRD31Q8N7Z5 1873 aa12.53□□□□□ -0.4
MARK3-213ENST00000558611 GRIN3BO60391 1043 aa12.52□□□□□ -0.41
MARK3-213ENST00000558611 SNRPA1P09661 255 aaKnown RBP12.52□□□□□ -0.41
MARK3-213ENST00000558611 SYNPOQ8N3V7 929 aa12.52□□□□□ -0.41
MARK3-213ENST00000558611 KIFC2Q96AC6 838 aa12.52□□□□□ -0.41
MARK3-213ENST00000558611 LACRTQ9GZZ8 138 aa12.52□□□□□ -0.41
MARK3-213ENST00000558611 SRP68Q9UHB9 627 aaKnown RBP12.52□□□□□ -0.41
MARK3-213ENST00000558611 TRIM33Q9UPN9 1127 aa12.52□□□□□ -0.41
MARK3-213ENST00000558611 LEMD3Q9Y2U8 911 aa12.52□□□□□ -0.41
MARK3-213ENST00000558611 SLC12A7Q9Y666 1083 aa12.52□□□□□ -0.41
MARK3-213ENST00000558611 ARFGEF1Q9Y6D6 1849 aa12.52□□□□□ -0.41
MARK3-213ENST00000558611 CACNA1SQ13698 1873 aa12.52□□□□□ -0.41
MARK3-213ENST00000558611 PRAMEF22A3QJZ6 481 aa12.51□□□□□ -0.41
MARK3-213ENST00000558611 GUCY2CP25092 1073 aa12.51□□□□□ -0.41
MARK3-213ENST00000558611 CDC27P30260 824 aa12.51□□□□□ -0.41
MARK3-213ENST00000558611 MAP1SQ66K74 1059 aaPredicted RBP12.51□□□□□ -0.41
MARK3-213ENST00000558611 RUFY4Q6ZNE9 571 aa12.51□□□□□ -0.41
MARK3-213ENST00000558611 TTC6Q86TZ1 520 aa12.51□□□□□ -0.41
MARK3-213ENST00000558611 FAM178BQ8IXR5 827 aa12.51□□□□□ -0.41
MARK3-213ENST00000558611 LPIN3Q9BQK8 851 aa12.51□□□□□ -0.41
MARK3-213ENST00000558611 BABAM1Q9NWV8 329 aa12.51□□□□□ -0.41
MARK3-213ENST00000558611 NAGPAQ9UK23 515 aa12.51□□□□□ -0.41
MARK3-213ENST00000558611 USP16Q9Y5T5 823 aa12.51□□□□□ -0.41
MARK3-213ENST00000558611 KDM2BQ8NHM5 1336 aa12.51□□□□□ -0.41
MARK3-213ENST00000558611 CACNA1FO60840 1977 aa12.5□□□□□ -0.41
MARK3-213ENST00000558611 ADARB2-AS1A8MUL3 147 aa12.5□□□□□ -0.41
MARK3-213ENST00000558611 SOX1O00570 391 aaPredicted RBP12.5□□□□□ -0.41
MARK3-213ENST00000558611 APAF1O14727 1248 aa12.5□□□□□ -0.41
MARK3-213ENST00000558611 A1BGP04217 495 aa12.5□□□□□ -0.41
MARK3-213ENST00000558611 MMP10P09238 476 aa12.5□□□□□ -0.41
MARK3-213ENST00000558611 BMP4P12644 408 aa12.5□□□□□ -0.41
MARK3-213ENST00000558611 IL6STP40189 918 aaPredicted RBP12.5□□□□□ -0.41
MARK3-213ENST00000558611 EIF5P55010 431 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms