RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 DSG3P32926 999 aa18.19■□□□□ 0.5
LINC01220-201ENST00000558575 GMCL1Q96IK5 515 aa18.19■□□□□ 0.5
LINC01220-201ENST00000558575 UBAC1Q9BSL1 405 aa18.19■□□□□ 0.5
LINC01220-201ENST00000558575 TANGO6Q9C0B7 1094 aa18.19■□□□□ 0.5
LINC01220-201ENST00000558575 SENP6Q9GZR1 1112 aaPredicted RBP18.19■□□□□ 0.5
LINC01220-201ENST00000558575 IFIT3O14879 490 aaKnown RBP18.18■□□□□ 0.5
LINC01220-201ENST00000558575 PRC1O43663 620 aa18.18■□□□□ 0.5
LINC01220-201ENST00000558575 SNHG28P0DPA3 235 aa18.18■□□□□ 0.5
LINC01220-201ENST00000558575 CPA1P15085 419 aa18.18■□□□□ 0.5
LINC01220-201ENST00000558575 MCM5P33992 734 aa18.18■□□□□ 0.5
LINC01220-201ENST00000558575 ATN1P54259 1190 aaPredicted RBP18.18■□□□□ 0.5
LINC01220-201ENST00000558575 SMAD3P84022 425 aaKnown RBP18.18■□□□□ 0.5
LINC01220-201ENST00000558575 Q3C1V9 767 aa18.18■□□□□ 0.5
LINC01220-201ENST00000558575 LBX2Q6XYB7 198 aa18.18■□□□□ 0.5
LINC01220-201ENST00000558575 USP6NLQ92738 828 aa18.18■□□□□ 0.5
LINC01220-201ENST00000558575 NUDT12Q9BQG2 462 aa18.18■□□□□ 0.5
LINC01220-201ENST00000558575 HOXC10Q9NYD6 342 aa18.18■□□□□ 0.5
LINC01220-201ENST00000558575 ADAMTS5Q9UNA0 930 aa18.18■□□□□ 0.5
LINC01220-201ENST00000558575 MTMR7Q9Y216 660 aa18.18■□□□□ 0.5
LINC01220-201ENST00000558575 TCF20Q9UGU0 1960 aaKnown RBP18.18■□□□□ 0.5
LINC01220-201ENST00000558575 FLOT1O75955 427 aa18.17■□□□□ 0.5
LINC01220-201ENST00000558575 PDHBP11177 359 aa18.17■□□□□ 0.5
LINC01220-201ENST00000558575 BMP3P12645 472 aa18.17■□□□□ 0.5
LINC01220-201ENST00000558575 KRT32Q14532 448 aa18.17■□□□□ 0.5
LINC01220-201ENST00000558575 KCTD1Q719H9 257 aa18.17■□□□□ 0.5
LINC01220-201ENST00000558575 PNMA1Q8ND90 353 aa18.17■□□□□ 0.5
LINC01220-201ENST00000558575 ATG4CQ96DT6 458 aa18.17■□□□□ 0.5
LINC01220-201ENST00000558575 FAM122AQ96E09 287 aa18.17■□□□□ 0.5
LINC01220-201ENST00000558575 TCEANC2Q96MN5 208 aa18.17■□□□□ 0.5
LINC01220-201ENST00000558575 LRRC2Q9BYS8 371 aa18.17■□□□□ 0.5
LINC01220-201ENST00000558575 BTBD7Q9P203 1132 aa18.17■□□□□ 0.5
LINC01220-201ENST00000558575 PLXNA1Q9UIW2 1896 aa18.16■□□□□ 0.5
LINC01220-201ENST00000558575 MYH4Q9Y623 1939 aa18.16■□□□□ 0.5
LINC01220-201ENST00000558575 TMEM265A0A087WTH1 108 aa18.16■□□□□ 0.5
LINC01220-201ENST00000558575 SH2B2O14492 632 aaPredicted RBP18.16■□□□□ 0.5
LINC01220-201ENST00000558575 SLC1A4P43007 532 aa18.16■□□□□ 0.5
LINC01220-201ENST00000558575 RTP1P59025 263 aa18.16■□□□□ 0.5
LINC01220-201ENST00000558575 TMEM67Q5HYA8 995 aa18.16■□□□□ 0.5
LINC01220-201ENST00000558575 IFIT1BQ5T764 474 aaKnown RBP18.16■□□□□ 0.5
LINC01220-201ENST00000558575 TTBK2Q6IQ55 1244 aa18.16■□□□□ 0.5
LINC01220-201ENST00000558575 DHX32Q7L7V1 743 aaKnown RBP18.16■□□□□ 0.5
LINC01220-201ENST00000558575 DCAF4Q8WV16 495 aa18.16■□□□□ 0.5
LINC01220-201ENST00000558575 SOCS4Q8WXH5 440 aa18.16■□□□□ 0.5
LINC01220-201ENST00000558575 JAKMIP1Q96N16 626 aaKnown RBP18.16■□□□□ 0.5
LINC01220-201ENST00000558575 MTA3Q9BTC8 594 aa18.16■□□□□ 0.5
LINC01220-201ENST00000558575 LY9Q9HBG7 655 aa18.16■□□□□ 0.5
LINC01220-201ENST00000558575 PPP1R9AQ9ULJ8 1098 aa18.16■□□□□ 0.5
LINC01220-201ENST00000558575 TMEM232C9JQI7 657 aa18.15■□□□□ 0.5
LINC01220-201ENST00000558575 HOXD11P31277 338 aaPredicted RBP18.15■□□□□ 0.5
LINC01220-201ENST00000558575 REPS2Q8NFH8 660 aa18.15■□□□□ 0.5
LINC01220-201ENST00000558575 TMEM87BQ96K49 555 aa18.15■□□□□ 0.5
LINC01220-201ENST00000558575 KAT14Q9H8E8 782 aa18.15■□□□□ 0.5
LINC01220-201ENST00000558575 RABGAP1Q9Y3P9 1069 aa18.15■□□□□ 0.5
LINC01220-201ENST00000558575 PLA2G6O60733 806 aa18.14■□□□□ 0.49
LINC01220-201ENST00000558575 ZNF543Q08ER8 600 aa18.14■□□□□ 0.49
LINC01220-201ENST00000558575 WTAPQ15007 396 aa18.14■□□□□ 0.49
LINC01220-201ENST00000558575 SAMD1Q6SPF0 538 aaPredicted RBP18.14■□□□□ 0.49
LINC01220-201ENST00000558575 TRMT44Q8IYL2 757 aaKnown RBP18.14■□□□□ 0.49
LINC01220-201ENST00000558575 SLF1Q9BQI6 1058 aa18.14■□□□□ 0.49
LINC01220-201ENST00000558575 PAGR1Q9BTK6 254 aa18.14■□□□□ 0.49
LINC01220-201ENST00000558575 PORCNQ9H237 461 aa18.14■□□□□ 0.49
LINC01220-201ENST00000558575 GPCPD1Q9NPB8 672 aa18.14■□□□□ 0.49
LINC01220-201ENST00000558575 PRKAG2Q9UGJ0 569 aa18.14■□□□□ 0.49
LINC01220-201ENST00000558575 FEM1BQ9UK73 627 aa18.14■□□□□ 0.49
LINC01220-201ENST00000558575 FRMPD2Q68DX3 1309 aaPredicted RBP18.14■□□□□ 0.49
LINC01220-201ENST00000558575 GBF1Q92538 1859 aa18.14■□□□□ 0.49
LINC01220-201ENST00000558575 VWA5AO00534 786 aa18.13■□□□□ 0.49
LINC01220-201ENST00000558575 GOLGA8HP0CJ92 632 aa18.13■□□□□ 0.49
LINC01220-201ENST00000558575 SLC16A2P36021 539 aa18.13■□□□□ 0.49
LINC01220-201ENST00000558575 LIFRP42702 1097 aa18.13■□□□□ 0.49
LINC01220-201ENST00000558575 ERVK-9P63128 1117 aa18.13■□□□□ 0.49
LINC01220-201ENST00000558575 ERVK-24P63145 666 aa18.13■□□□□ 0.49
LINC01220-201ENST00000558575 TROAPQ12815 778 aa18.13■□□□□ 0.49
LINC01220-201ENST00000558575 TMEM132BQ14DG7 1078 aa18.13■□□□□ 0.49
LINC01220-201ENST00000558575 MORN1Q5T089 497 aa18.13■□□□□ 0.49
LINC01220-201ENST00000558575 BTNL9Q6UXG8 535 aa18.13■□□□□ 0.49
LINC01220-201ENST00000558575 PRPF38AQ8NAV1 312 aaKnown RBP18.13■□□□□ 0.49
LINC01220-201ENST00000558575 GPRC5AQ8NFJ5 357 aa18.13■□□□□ 0.49
LINC01220-201ENST00000558575 GTF3C2Q8WUA4 911 aaPredicted RBP18.13■□□□□ 0.49
LINC01220-201ENST00000558575 BADQ92934 168 aa18.13■□□□□ 0.49
LINC01220-201ENST00000558575 IL17RAQ96F46 866 aa18.13■□□□□ 0.49
LINC01220-201ENST00000558575 ZSWIM6Q9HCJ5 1215 aa18.13■□□□□ 0.49
LINC01220-201ENST00000558575 WDR19Q8NEZ3 1342 aa18.13■□□□□ 0.49
LINC01220-201ENST00000558575 ERICH2A1L162 156 aa18.12■□□□□ 0.49
LINC01220-201ENST00000558575 RGS2P41220 211 aa18.12■□□□□ 0.49
LINC01220-201ENST00000558575 GRIN2CQ14957 1233 aa18.12■□□□□ 0.49
LINC01220-201ENST00000558575 SART3Q15020 963 aaKnown RBP18.12■□□□□ 0.49
LINC01220-201ENST00000558575 CCDC96Q2M329 555 aa18.12■□□□□ 0.49
LINC01220-201ENST00000558575 STAG2Q8N3U4 1231 aa18.12■□□□□ 0.49
LINC01220-201ENST00000558575 KIFC2Q96AC6 838 aa18.12■□□□□ 0.49
LINC01220-201ENST00000558575 APBA2Q99767 749 aa18.12■□□□□ 0.49
LINC01220-201ENST00000558575 TM6SF1Q9BZW5 370 aa18.12■□□□□ 0.49
LINC01220-201ENST00000558575 CPVLQ9H3G5 476 aa18.12■□□□□ 0.49
LINC01220-201ENST00000558575 FLRT1Q9NZU1 646 aa18.12■□□□□ 0.49
LINC01220-201ENST00000558575 PRR12Q9ULL5 1215 aa18.12■□□□□ 0.49
LINC01220-201ENST00000558575 ATP11BQ9Y2G3 1177 aa18.12■□□□□ 0.49
LINC01220-201ENST00000558575 CHD9Q3L8U1 2897 aa18.11■□□□□ 0.49
LINC01220-201ENST00000558575 HMGB1P09429 215 aaKnown RBP18.11■□□□□ 0.49
LINC01220-201ENST00000558575 CASTP20810 708 aaKnown RBP18.11■□□□□ 0.49
LINC01220-201ENST00000558575 RPS6KB1P23443 525 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms