RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 ZNF213O14771 459 aa15.78■□□□□ 0.12
TMED3-205ENST00000558562 PGK1P00558 417 aa15.78■□□□□ 0.12
TMED3-205ENST00000558562 RAG1P15918 1043 aa15.78■□□□□ 0.12
TMED3-205ENST00000558562 COL9A3Q14050 684 aaPredicted RBP15.78■□□□□ 0.12
TMED3-205ENST00000558562 NBR1Q14596 966 aa15.78■□□□□ 0.12
TMED3-205ENST00000558562 SAMD1Q6SPF0 538 aaPredicted RBP15.78■□□□□ 0.12
TMED3-205ENST00000558562 PPM1EQ8WY54 764 aa15.78■□□□□ 0.12
TMED3-205ENST00000558562 MAML3Q96JK9 1138 aa15.78■□□□□ 0.12
TMED3-205ENST00000558562 LARP6Q9BRS8 491 aaKnown RBP15.78■□□□□ 0.12
TMED3-205ENST00000558562 NACAP1Q9BZK3 213 aa15.78■□□□□ 0.12
TMED3-205ENST00000558562 NAPBQ9H115 298 aa15.78■□□□□ 0.12
TMED3-205ENST00000558562 EPB41L4AQ9HCS5 686 aaPredicted RBP15.78■□□□□ 0.12
TMED3-205ENST00000558562 XPNPEP3Q9NQH7 507 aa15.78■□□□□ 0.12
TMED3-205ENST00000558562 PHF24Q9UPV7 400 aa15.78■□□□□ 0.12
TMED3-205ENST00000558562 TMEM265A0A087WTH1 108 aa15.77■□□□□ 0.12
TMED3-205ENST00000558562 LARGE1O95461 756 aa15.77■□□□□ 0.12
TMED3-205ENST00000558562 POLR3DP05423 398 aaPredicted RBP15.77■□□□□ 0.12
TMED3-205ENST00000558562 DNAJB2P25686 324 aa15.77■□□□□ 0.12
TMED3-205ENST00000558562 TOB2Q14106 344 aaPredicted RBP15.77■□□□□ 0.12
TMED3-205ENST00000558562 NFKBIBQ15653 356 aa15.77■□□□□ 0.12
TMED3-205ENST00000558562 DHX32Q7L7V1 743 aaKnown RBP15.77■□□□□ 0.12
TMED3-205ENST00000558562 IFNL3Q8IZI9 196 aa15.77■□□□□ 0.12
TMED3-205ENST00000558562 SHCBP1Q8NEM2 672 aa15.77■□□□□ 0.12
TMED3-205ENST00000558562 SLC5A4Q9NY91 659 aa15.77■□□□□ 0.12
TMED3-205ENST00000558562 NAV1Q8NEY1 1877 aa15.77■□□□□ 0.11
TMED3-205ENST00000558562 GSG1L2A8MUP6 293 aa15.76■□□□□ 0.11
TMED3-205ENST00000558562 KIAA0355O15063 1070 aa15.76■□□□□ 0.11
TMED3-205ENST00000558562 PRKAB2O43741 272 aa15.76■□□□□ 0.11
TMED3-205ENST00000558562 RARBP10826 455 aa15.76■□□□□ 0.11
TMED3-205ENST00000558562 TAL1P17542 331 aaPredicted RBP15.76■□□□□ 0.11
TMED3-205ENST00000558562 TDO2P48775 406 aa15.76■□□□□ 0.11
TMED3-205ENST00000558562 NUCB2P80303 420 aa15.76■□□□□ 0.11
TMED3-205ENST00000558562 FGD1P98174 961 aa15.76■□□□□ 0.11
TMED3-205ENST00000558562 FPGSQ05932 587 aa15.76■□□□□ 0.11
TMED3-205ENST00000558562 Q6ZUG5 572 aa15.76■□□□□ 0.11
TMED3-205ENST00000558562 RALYLQ86SE5 291 aaKnown RBP15.76■□□□□ 0.11
TMED3-205ENST00000558562 SPICE1Q8N0Z3 855 aa15.76■□□□□ 0.11
TMED3-205ENST00000558562 LENG1Q96BZ8 264 aaPredicted RBP15.76■□□□□ 0.11
TMED3-205ENST00000558562 ATG4CQ96DT6 458 aa15.76■□□□□ 0.11
TMED3-205ENST00000558562 RIOK1Q9BRS2 568 aaKnown RBP15.76■□□□□ 0.11
TMED3-205ENST00000558562 MROH8Q9H579 483 aa15.76■□□□□ 0.11
TMED3-205ENST00000558562 ZNF576Q9H609 170 aa15.76■□□□□ 0.11
TMED3-205ENST00000558562 TMEM39AQ9NV64 488 aa15.76■□□□□ 0.11
TMED3-205ENST00000558562 A0A0G2JMZ2 1700 aa15.76■□□□□ 0.11
TMED3-205ENST00000558562 ZNFX1Q9P2E3 1918 aaKnown RBP15.75■□□□□ 0.11
TMED3-205ENST00000558562 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.75■□□□□ 0.11
TMED3-205ENST00000558562 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.75■□□□□ 0.11
TMED3-205ENST00000558562 A0A1W2PQ45 241 aaPredicted RBP15.75■□□□□ 0.11
TMED3-205ENST00000558562 A0A1W2PQY0 241 aa15.75■□□□□ 0.11
TMED3-205ENST00000558562 FLOT1O75955 427 aa15.75■□□□□ 0.11
TMED3-205ENST00000558562 PGK2P07205 417 aa15.75■□□□□ 0.11
TMED3-205ENST00000558562 FCER1AP12319 257 aa15.75■□□□□ 0.11
TMED3-205ENST00000558562 DSG3P32926 999 aa15.75■□□□□ 0.11
TMED3-205ENST00000558562 GABPAQ06546 454 aa15.75■□□□□ 0.11
TMED3-205ENST00000558562 CLEC10AQ8IUN9 316 aa15.75■□□□□ 0.11
TMED3-205ENST00000558562 ABRAQ8N0Z2 381 aa15.75■□□□□ 0.11
TMED3-205ENST00000558562 NCOA7Q8NI08 942 aa15.75■□□□□ 0.11
TMED3-205ENST00000558562 TPCN1Q9ULQ1 816 aa15.75■□□□□ 0.11
TMED3-205ENST00000558562 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.75■□□□□ 0.11
TMED3-205ENST00000558562 EXOSC10Q01780 885 aaKnown RBP15.74■□□□□ 0.11
TMED3-205ENST00000558562 FAAP100Q0VG06 881 aa15.74■□□□□ 0.11
TMED3-205ENST00000558562 TRDNQ13061 729 aa15.74■□□□□ 0.11
TMED3-205ENST00000558562 ME3Q16798 604 aa15.74■□□□□ 0.11
TMED3-205ENST00000558562 RNF180Q86T96 592 aa15.74■□□□□ 0.11
TMED3-205ENST00000558562 CERS3Q8IU89 383 aa15.74■□□□□ 0.11
TMED3-205ENST00000558562 TBC1D10CQ8IV04 446 aa15.74■□□□□ 0.11
TMED3-205ENST00000558562 CCDC83Q8IWF9 413 aa15.74■□□□□ 0.11
TMED3-205ENST00000558562 MB21D2Q8IYB1 491 aaPredicted RBP15.74■□□□□ 0.11
TMED3-205ENST00000558562 MB21D1Q8N884 522 aa15.74■□□□□ 0.11
TMED3-205ENST00000558562 SLC44A5Q8NCS7 719 aa15.74■□□□□ 0.11
TMED3-205ENST00000558562 TIFAQ96CG3 184 aa15.74■□□□□ 0.11
TMED3-205ENST00000558562 LRRC2Q9BYS8 371 aa15.74■□□□□ 0.11
TMED3-205ENST00000558562 GRXCR1A8MXD5 290 aa15.73■□□□□ 0.11
TMED3-205ENST00000558562 CYP2D6P10635 497 aa15.73■□□□□ 0.11
TMED3-205ENST00000558562 PBX2P40425 430 aa15.73■□□□□ 0.11
TMED3-205ENST00000558562 TMEM132BQ14DG7 1078 aa15.73■□□□□ 0.11
TMED3-205ENST00000558562 SDR42E1Q8WUS8 393 aa15.73■□□□□ 0.11
TMED3-205ENST00000558562 MMP19Q99542 508 aa15.73■□□□□ 0.11
TMED3-205ENST00000558562 CRNKL1Q9BZJ0 848 aaKnown RBP15.73■□□□□ 0.11
TMED3-205ENST00000558562 MCM9Q9NXL9 1143 aa15.73■□□□□ 0.11
TMED3-205ENST00000558562 MYO9BQ13459 2157 aa15.73■□□□□ 0.11
TMED3-205ENST00000558562 WDR19Q8NEZ3 1342 aa15.72■□□□□ 0.11
TMED3-205ENST00000558562 PRC1O43663 620 aa15.72■□□□□ 0.11
TMED3-205ENST00000558562 MCM5P33992 734 aa15.72■□□□□ 0.11
TMED3-205ENST00000558562 SIAH1Q8IUQ4 282 aa15.72■□□□□ 0.11
TMED3-205ENST00000558562 TNPO1Q92973 898 aaKnown RBP15.72■□□□□ 0.11
TMED3-205ENST00000558562 BRF1Q92994 677 aa15.72■□□□□ 0.11
TMED3-205ENST00000558562 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.72■□□□□ 0.113e-6■■■■□ 22.3
TMED3-205ENST00000558562 TINF2Q9BSI4 451 aa15.72■□□□□ 0.11
TMED3-205ENST00000558562 AGXT2Q9BYV1 514 aa15.72■□□□□ 0.11
TMED3-205ENST00000558562 SMC3Q9UQE7 1217 aa15.72■□□□□ 0.11
TMED3-205ENST00000558562 NEDD4P46934 1319 aa15.71■□□□□ 0.11
TMED3-205ENST00000558562 DCDC2CA8MYV0 355 aa15.71■□□□□ 0.11
TMED3-205ENST00000558562 ZNF865P0CJ78 1059 aaPredicted RBP15.71■□□□□ 0.11
TMED3-205ENST00000558562 CTDSPL2Q05D32 466 aa15.71■□□□□ 0.11
TMED3-205ENST00000558562 ST3GAL1Q11201 340 aa15.71■□□□□ 0.11
TMED3-205ENST00000558562 GIMAP6Q6P9H5 292 aa15.71■□□□□ 0.11
TMED3-205ENST00000558562 TMEM179Q6ZVK1 233 aa15.71■□□□□ 0.11
TMED3-205ENST00000558562 NECAB1Q8N987 351 aa15.71■□□□□ 0.11
TMED3-205ENST00000558562 DYNLL2Q96FJ2 89 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms