RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 STK11IPQ8N1F8 1099 aa13.26□□□□□ -0.29
RABGGTA-204ENST00000558376 MSL3Q8N5Y2 521 aaKnown RBP13.26□□□□□ -0.29
RABGGTA-204ENST00000558376 NUP133Q8WUM0 1156 aa13.26□□□□□ -0.29
RABGGTA-204ENST00000558376 DDX11Q96FC9 970 aa13.26□□□□□ -0.29
RABGGTA-204ENST00000558376 FGD4Q96M96 766 aa13.26□□□□□ -0.29
RABGGTA-204ENST00000558376 TEX13BQ9BXU2 312 aa13.26□□□□□ -0.29
RABGGTA-204ENST00000558376 IL25Q9H293 177 aa13.26□□□□□ -0.29
RABGGTA-204ENST00000558376 ZHX1Q9UKY1 873 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-204ENST00000558376 SYNGAP1Q96PV0 1343 aa13.26□□□□□ -0.29
RABGGTA-204ENST00000558376 GRXCR1A8MXD5 290 aa13.25□□□□□ -0.29
RABGGTA-204ENST00000558376 F5H6K3 240 aa13.25□□□□□ -0.29
RABGGTA-204ENST00000558376 DUSP11O75319 330 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-204ENST00000558376 KLRC3Q07444 240 aa13.25□□□□□ -0.29
RABGGTA-204ENST00000558376 TMEM240Q5SV17 173 aa13.25□□□□□ -0.29
RABGGTA-204ENST00000558376 CPXCR1Q8N123 301 aa13.25□□□□□ -0.29
RABGGTA-204ENST00000558376 TIFAQ96CG3 184 aa13.25□□□□□ -0.29
RABGGTA-204ENST00000558376 DDRGK1Q96HY6 314 aa13.25□□□□□ -0.29
RABGGTA-204ENST00000558376 STRBPQ96SI9 672 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-204ENST00000558376 C22orf23Q9BZE7 217 aa13.25□□□□□ -0.29
RABGGTA-204ENST00000558376 ZNF576Q9H609 170 aa13.25□□□□□ -0.29
RABGGTA-204ENST00000558376 NYAP2Q9P242 653 aa13.25□□□□□ -0.29
RABGGTA-204ENST00000558376 ANP32AP39687 249 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-204ENST00000558376 PBX2P40425 430 aa13.25□□□□□ -0.29
RABGGTA-204ENST00000558376 ACVR2BQ13705 512 aa13.25□□□□□ -0.29
RABGGTA-204ENST00000558376 MFSD5Q6N075 450 aa13.25□□□□□ -0.29
RABGGTA-204ENST00000558376 UPF2Q9HAU5 1272 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-204ENST00000558376 RAVER2Q9HCJ3 691 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-204ENST00000558376 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.25□□□□□ -0.29
RABGGTA-204ENST00000558376 CHD9Q3L8U1 2897 aa13.24□□□□□ -0.29
RABGGTA-204ENST00000558376 GSG1L2A8MUP6 293 aa13.24□□□□□ -0.29
RABGGTA-204ENST00000558376 CST5P28325 142 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-204ENST00000558376 SBK1Q52WX2 424 aa13.24□□□□□ -0.29
RABGGTA-204ENST00000558376 RASIP1Q5U651 963 aa13.24□□□□□ -0.29
RABGGTA-204ENST00000558376 ZNF467Q7Z7K2 595 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-204ENST00000558376 PRPF38AQ8NAV1 312 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-204ENST00000558376 SYMPKQ92797 1274 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-204ENST00000558376 TBC1D32Q96NH3 1257 aa13.24□□□□□ -0.29
RABGGTA-204ENST00000558376 UPF3AQ9H1J1 476 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-204ENST00000558376 CLIP2Q9UDT6 1046 aa13.24□□□□□ -0.29
RABGGTA-204ENST00000558376 ELP1O95163 1332 aa13.24□□□□□ -0.29
RABGGTA-204ENST00000558376 IGKV6D-41A0A0C4DH26 115 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 ATP2A1O14983 1001 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 CTAGE5O15320 804 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 ASGR1P07306 291 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 C6orf222P0C671 652 aaPredicted RBP13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 ACRP10323 421 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 CSF2RAP15509 400 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 GJA9P57773 515 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 CCDC144BQ3MJ40 725 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 GLT1D1Q96MS3 346 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 ARPP21Q9UBL0 812 aaPredicted RBP13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 MINDY4BA8MYZ0 360 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 ARVCFO00192 962 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 ZBED4O75132 1171 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 PPIGQ13427 754 aaKnown RBP eCLIP13.23□□□□□ -0.291e-7■■■□□ 17
RABGGTA-204ENST00000558376 TJAP1Q5JTD0 557 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 ZSCAN25Q6NSZ9 544 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 CASC1Q6TDU7 716 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 CWC27Q6UX04 472 aaKnown RBP13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 ZNF365Q70YC5 407 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 KIFC2Q96AC6 838 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 VTI1AQ96AJ9 217 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 EVI5LQ96CN4 794 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 PBX4Q9BYU1 374 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 KATNBL1Q9H079 304 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 MKNK2Q9HBH9 465 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 SLC38A10Q9HBR0 1119 aa13.23□□□□□ -0.29
RABGGTA-204ENST00000558376 GBF1Q92538 1859 aa13.22□□□□□ -0.29
RABGGTA-204ENST00000558376 GNASQ5JWF2 1037 aa13.22□□□□□ -0.29
RABGGTA-204ENST00000558376 FAM126BQ8IXS8 530 aa13.22□□□□□ -0.29
RABGGTA-204ENST00000558376 PCSK9Q8NBP7 692 aaKnown RBP13.22□□□□□ -0.29
RABGGTA-204ENST00000558376 PPM1EQ8WY54 764 aa13.22□□□□□ -0.29
RABGGTA-204ENST00000558376 OSBP2Q969R2 916 aa13.22□□□□□ -0.29
RABGGTA-204ENST00000558376 MKL1Q969V6 931 aa13.22□□□□□ -0.29
RABGGTA-204ENST00000558376 ESYT1Q9BSJ8 1104 aa13.22□□□□□ -0.29
RABGGTA-204ENST00000558376 USP26Q9BXU7 913 aa13.22□□□□□ -0.29
RABGGTA-204ENST00000558376 PPP1R12CQ9BZL4 782 aa13.22□□□□□ -0.29
RABGGTA-204ENST00000558376 ABHD16BQ9H3Z7 469 aa13.22□□□□□ -0.29
RABGGTA-204ENST00000558376 PRDM12Q9H4Q4 367 aa13.22□□□□□ -0.29
RABGGTA-204ENST00000558376 CNTN2Q02246 1040 aa13.21□□□□□ -0.29
RABGGTA-204ENST00000558376 CCDC129Q6ZRS4 1044 aa13.21□□□□□ -0.29
RABGGTA-204ENST00000558376 ARMCX2Q7L311 632 aa13.21□□□□□ -0.29
RABGGTA-204ENST00000558376 ANKRD35Q8N283 1001 aa13.21□□□□□ -0.29
RABGGTA-204ENST00000558376 EPB41L4AQ9HCS5 686 aaPredicted RBP13.21□□□□□ -0.29
RABGGTA-204ENST00000558376 MROH7Q68CQ1 1323 aa13.21□□□□□ -0.29
RABGGTA-204ENST00000558376 A0A0U1RQG5 324 aaPredicted RBP13.21□□□□□ -0.3
RABGGTA-204ENST00000558376 PRDM1O75626 825 aa13.21□□□□□ -0.3
RABGGTA-204ENST00000558376 CD4P01730 458 aa13.21□□□□□ -0.3
RABGGTA-204ENST00000558376 PTGS1P23219 599 aa13.21□□□□□ -0.3
RABGGTA-204ENST00000558376 CYP2C18P33260 490 aa13.21□□□□□ -0.3
RABGGTA-204ENST00000558376 BEX3Q00994 111 aa13.21□□□□□ -0.3
RABGGTA-204ENST00000558376 ADGRE1Q14246 886 aa13.21□□□□□ -0.3
RABGGTA-204ENST00000558376 GIMAP6Q6P9H5 292 aa13.21□□□□□ -0.3
RABGGTA-204ENST00000558376 CEP95Q96GE4 821 aa13.21□□□□□ -0.3
RABGGTA-204ENST00000558376 FAM227BQ96M60 508 aa13.21□□□□□ -0.3
RABGGTA-204ENST00000558376 FEM1BQ9UK73 627 aa13.21□□□□□ -0.3
RABGGTA-204ENST00000558376 ASTN1O14525 1302 aa13.2□□□□□ -0.3
RABGGTA-204ENST00000558376 BDP1A6H8Y1 2624 aa13.2□□□□□ -0.3
RABGGTA-204ENST00000558376 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms