RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 KRT23Q9C075 422 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 ASCC2Q9H1I8 757 aaPredicted RBP9.2□□□□□ -0.94
RTF1-205ENST00000558298 GOPCQ9HD26 462 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 FAM53CQ9NYF3 392 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 TACC3Q9Y6A5 838 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 PTCH2Q9Y6C5 1203 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 TSPY2A6NKD2 308 aa9.19□□□□□ -0.94
RTF1-205ENST00000558298 MPHOSPH10O00566 681 aaKnown RBP9.19□□□□□ -0.94
RTF1-205ENST00000558298 SNHG28P0DPA3 235 aa9.19□□□□□ -0.94
RTF1-205ENST00000558298 FDX1P10109 184 aa9.19□□□□□ -0.94
RTF1-205ENST00000558298 KCNJ6P48051 423 aa9.19□□□□□ -0.94
RTF1-205ENST00000558298 HERVK_113P62684 666 aa9.19□□□□□ -0.94
RTF1-205ENST00000558298 TFAP4Q01664 338 aa9.19□□□□□ -0.94
RTF1-205ENST00000558298 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.19□□□□□ -0.94
RTF1-205ENST00000558298 ZNF333Q96JL9 665 aa9.19□□□□□ -0.94
RTF1-205ENST00000558298 IL17RBQ9NRM6 502 aa9.19□□□□□ -0.94
RTF1-205ENST00000558298 SRRDQ9UH36 339 aa9.19□□□□□ -0.94
RTF1-205ENST00000558298 RABGAP1Q9Y3P9 1069 aa9.19□□□□□ -0.94
RTF1-205ENST00000558298 NEDD4P46934 1319 aa9.19□□□□□ -0.94
RTF1-205ENST00000558298 WDR19Q8NEZ3 1342 aa9.19□□□□□ -0.94
RTF1-205ENST00000558298 SPDYE16A6NNV3 312 aaPredicted RBP9.18□□□□□ -0.94
RTF1-205ENST00000558298 ATP2A1O14983 1001 aa9.18□□□□□ -0.94
RTF1-205ENST00000558298 PRDM1O75626 825 aa9.18□□□□□ -0.94
RTF1-205ENST00000558298 NDUFB10O96000 172 aa9.18□□□□□ -0.94
RTF1-205ENST00000558298 TOP1P11387 765 aaKnown RBP9.18□□□□□ -0.94
RTF1-205ENST00000558298 PDCP20941 246 aa9.18□□□□□ -0.94
RTF1-205ENST00000558298 CYP2C19P33261 490 aa9.18□□□□□ -0.94
RTF1-205ENST00000558298 PSMC4P43686 418 aa9.18□□□□□ -0.94
RTF1-205ENST00000558298 OAZ1P54368 228 aa9.18□□□□□ -0.94
RTF1-205ENST00000558298 GSDMDP57764 484 aa9.18□□□□□ -0.94
RTF1-205ENST00000558298 PTH1RQ03431 593 aa9.18□□□□□ -0.94
RTF1-205ENST00000558298 CTDSPL2Q05D32 466 aa9.18□□□□□ -0.94
RTF1-205ENST00000558298 FILIP1Q7Z7B0 1213 aa9.18□□□□□ -0.94
RTF1-205ENST00000558298 RPAINQ86UA6 219 aa9.18□□□□□ -0.94
RTF1-205ENST00000558298 IQCA1Q86XH1 822 aa9.18□□□□□ -0.94
RTF1-205ENST00000558298 SMCR8Q8TEV9 937 aaPredicted RBP9.18□□□□□ -0.94
RTF1-205ENST00000558298 TMX3Q96JJ7 454 aa9.18□□□□□ -0.94
RTF1-205ENST00000558298 RASSF4Q9H2L5 321 aa9.18□□□□□ -0.94
RTF1-205ENST00000558298 TXNRD2Q9NNW7 524 aa9.18□□□□□ -0.94
RTF1-205ENST00000558298 FOXD4L1Q9NU39 408 aa9.18□□□□□ -0.94
RTF1-205ENST00000558298 HOXC10Q9NYD6 342 aa9.18□□□□□ -0.94
RTF1-205ENST00000558298 RBM27Q9P2N5 1060 aaKnown RBP9.18□□□□□ -0.94
RTF1-205ENST00000558298 ZDHHC9Q9Y397 364 aa9.18□□□□□ -0.94
RTF1-205ENST00000558298 RBM8AQ9Y5S9 174 aaKnown RBP9.18□□□□□ -0.94
RTF1-205ENST00000558298 KIAA0100Q14667 2235 aaKnown RBP9.17□□□□□ -0.94
RTF1-205ENST00000558298 SPDYE4A6NLX3 237 aa9.17□□□□□ -0.94
RTF1-205ENST00000558298 F5H6K3 240 aa9.17□□□□□ -0.94
RTF1-205ENST00000558298 CNMDO75829 334 aa9.17□□□□□ -0.94
RTF1-205ENST00000558298 IVLP07476 585 aa9.17□□□□□ -0.94
RTF1-205ENST00000558298 CHRM1P11229 460 aaPredicted RBP9.17□□□□□ -0.94
RTF1-205ENST00000558298 TNNT1P13805 278 aa9.17□□□□□ -0.94
RTF1-205ENST00000558298 COPB2P35606 906 aa9.17□□□□□ -0.94
RTF1-205ENST00000558298 SOX10P56693 466 aa9.17□□□□□ -0.94
RTF1-205ENST00000558298 HAND2P61296 217 aa9.17□□□□□ -0.94
RTF1-205ENST00000558298 PRKCZQ05513 592 aa9.17□□□□□ -0.94
RTF1-205ENST00000558298 KLRC3Q07444 240 aa9.17□□□□□ -0.94
RTF1-205ENST00000558298 IRF5Q13568 498 aa9.17□□□□□ -0.94
RTF1-205ENST00000558298 COG2Q14746 738 aa9.17□□□□□ -0.94
RTF1-205ENST00000558298 KIAA1755Q5JYT7 1200 aa9.17□□□□□ -0.94
RTF1-205ENST00000558298 CLEC10AQ8IUN9 316 aa9.17□□□□□ -0.94
RTF1-205ENST00000558298 FBXL16Q8N461 479 aa9.17□□□□□ -0.94
RTF1-205ENST00000558298 SHCBP1Q8NEM2 672 aa9.17□□□□□ -0.94
RTF1-205ENST00000558298 DCAF4Q8WV16 495 aa9.17□□□□□ -0.94
RTF1-205ENST00000558298 P2RX7Q99572 595 aaKnown RBP9.17□□□□□ -0.94
RTF1-205ENST00000558298 TACO1Q9BSH4 297 aaKnown RBP9.17□□□□□ -0.94
RTF1-205ENST00000558298 FAM107BQ9H098 131 aa9.17□□□□□ -0.94
RTF1-205ENST00000558298 RPAP3Q9H6T3 665 aaPredicted RBP9.17□□□□□ -0.94
RTF1-205ENST00000558298 DDX19AQ9NUU7 478 aaKnown RBP9.17□□□□□ -0.94
RTF1-205ENST00000558298 RBPJLQ9UBG7 517 aa9.17□□□□□ -0.94
RTF1-205ENST00000558298 PPP1R9AQ9ULJ8 1098 aa9.17□□□□□ -0.94
RTF1-205ENST00000558298 RANBP6O60518 1105 aaKnown RBP9.16□□□□□ -0.94
RTF1-205ENST00000558298 SLU7O95391 586 aaKnown RBP9.16□□□□□ -0.94
RTF1-205ENST00000558298 DSG3P32926 999 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 NEK4P51957 841 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 FCGRTP55899 365 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 ERVK-9P63128 1117 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 ERVK-24P63145 666 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 TRDNQ13061 729 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 KRT32Q14532 448 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 KIF22Q14807 665 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 SEC23AQ15436 765 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 JAKMIP3Q5VZ66 844 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 CEP135Q66GS9 1140 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 BTNL9Q6UXG8 535 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 FAM160B2Q86V87 743 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 MB21D2Q8IYB1 491 aaPredicted RBP9.16□□□□□ -0.94
RTF1-205ENST00000558298 ANKRD13CQ8N6S4 541 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 REPS2Q8NFH8 660 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 NCOA7Q8NI08 942 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 SOCS4Q8WXH5 440 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 ZSCAN31Q96LW9 406 aaPredicted RBP9.16□□□□□ -0.94
RTF1-205ENST00000558298 MAP3K14Q99558 947 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 ARID3AQ99856 593 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 MAF1Q9H063 256 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 TTC12Q9H892 705 aaPredicted RBP9.16□□□□□ -0.94
RTF1-205ENST00000558298 ANO2Q9NQ90 1003 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 PSD3Q9NYI0 1048 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 FEM1BQ9UK73 627 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 PNMA2Q9UL42 364 aa9.16□□□□□ -0.94
RTF1-205ENST00000558298 GABRQQ9UN88 632 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms