RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 DHX58Q96C10 678 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 C16orf45Q96MC5 204 aaPredicted RBP9.42□□□□□ -0.9
SPG11-209ENST00000558253 PANX2Q96RD6 677 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 ZBED2Q9BTP6 218 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 MRIQ9BWK5 157 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 RTFDC1Q9BY42 306 aaPredicted RBP9.42□□□□□ -0.9
SPG11-209ENST00000558253 CCSER1Q9C0I3 900 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 C6orf50Q9HD87 102 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 IL17RBQ9NRM6 502 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 SWAP70Q9UH65 585 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 CCDC88AQ3V6T2 1871 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 LAMB1P07942 1786 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 C10orf71Q711Q0 1435 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 ITIH6Q6UXX5 1313 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 PHLPP2Q6ZVD8 1323 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 ECM29Q5VYK3 1845 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 A0A1B0GTH6 734 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 WTIPA6NIX2 430 aaPredicted RBP9.41□□□□□ -0.9
SPG11-209ENST00000558253 UBE2Q2LH0YL09 131 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 M0R2N6 131 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 SLC26A4O43511 780 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 PARP1P09874 1014 aaKnown RBP9.41□□□□□ -0.9
SPG11-209ENST00000558253 GYS1P13807 737 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 ATP2B1P20020 1258 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 RASA1P20936 1047 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 BMP6P22004 513 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 BTDP43251 543 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 KCNQ4P56696 695 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 STIM1Q13586 685 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 TUBB2AQ13885 445 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 KCNB1Q14721 858 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 TSR1Q2NL82 804 aaKnown RBP9.41□□□□□ -0.9
SPG11-209ENST00000558253 ZNF658Q5TYW1 1059 aaPredicted RBP9.41□□□□□ -0.9
SPG11-209ENST00000558253 PIK3AP1Q6ZUJ8 805 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 TXNRD3Q86VQ6 643 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 TEX2Q8IWB9 1127 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 TEX11Q8IYF3 940 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 SEPT12Q8IYM1 358 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 NLGN1Q8N2Q7 840 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 TBC1D16Q8TBP0 767 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 TGFBRAP1Q8WUH2 860 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 RRP36Q96EU6 259 aaKnown RBP9.41□□□□□ -0.9
SPG11-209ENST00000558253 ERO1AQ96HE7 468 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 EYA3Q99504 573 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 FEZ1Q99689 392 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 NAP1L4Q99733 375 aaKnown RBP9.41□□□□□ -0.9
SPG11-209ENST00000558253 TMEM47Q9BQJ4 181 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 TUBB2BQ9BVA1 445 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 ZMYND12Q9H0C1 365 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 GLT8D2Q9H1C3 349 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 CGNQ9P2M7 1197 aaKnown RBP9.41□□□□□ -0.9
SPG11-209ENST00000558253 SEC63Q9UGP8 760 aaKnown RBP9.41□□□□□ -0.9
SPG11-209ENST00000558253 MAD2L2Q9UI95 211 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 RWDD2AQ9UIY3 292 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 VPS9D1Q9Y2B5 631 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.41□□□□□ -0.9
SPG11-209ENST00000558253 COL4A1P02462 1669 aa9.41□□□□□ -0.9
SPG11-209ENST00000558253 PLIN4Q96Q06 1357 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 VWA3AA6NCI4 1184 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 H7C1D1 291 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 CYP2D6P10635 497 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 ATP1A3P13637 1013 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 ALDH1B1P30837 517 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 CDK8P49336 464 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 ETF1P62495 437 aaKnown RBP9.4□□□□□ -0.9
SPG11-209ENST00000558253 FKBP1AP62942 108 aaKnown RBP9.4□□□□□ -0.9
SPG11-209ENST00000558253 AMPD3Q01432 767 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 CUL4BQ13620 913 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 ASPRV1Q53RT3 343 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 SPECC1Q5M775 1068 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 SOGA3Q5TF21 947 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 CDKAL1Q5VV42 579 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 TAF3Q5VWG9 929 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 E4F1Q66K89 784 aaPredicted RBP9.4□□□□□ -0.9
SPG11-209ENST00000558253 MCTP2Q6DN12 878 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 PPP1R18Q6NYC8 613 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 PDXDC2PQ6P474 469 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 ADGRD1Q6QNK2 874 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 PTF1AQ7RTS3 328 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 PPFIBP1Q86W92 1011 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 C4orf32Q8N8J7 132 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 EPSTI1Q96J88 318 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 PPP1R13BQ96KQ4 1090 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 BAG1Q99933 345 aaPredicted RBP9.4□□□□□ -0.9
SPG11-209ENST00000558253 CCDC94Q9BW85 323 aaPredicted RBP9.4□□□□□ -0.9
SPG11-209ENST00000558253 LRRC27Q9C0I9 530 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 LIMA1Q9UHB6 759 aaKnown RBP9.4□□□□□ -0.9
SPG11-209ENST00000558253 ATP6V0A2Q9Y487 856 aa9.4□□□□□ -0.9
SPG11-209ENST00000558253 TAF1LQ8IZX4 1826 aa9.4□□□□□ -0.91
SPG11-209ENST00000558253 MYH13Q9UKX3 1938 aa9.39□□□□□ -0.91
SPG11-209ENST00000558253 AFF2P51816 1311 aa9.39□□□□□ -0.91
SPG11-209ENST00000558253 SYNRGQ9UMZ2 1314 aa9.39□□□□□ -0.91
SPG11-209ENST00000558253 AKR1B15C9JRZ8 316 aaPredicted RBP9.39□□□□□ -0.91
SPG11-209ENST00000558253 KLRF2D3W0D1 207 aa9.39□□□□□ -0.91
SPG11-209ENST00000558253 STXBP3O00186 592 aa9.39□□□□□ -0.91
SPG11-209ENST00000558253 NMT2O60551 498 aa9.39□□□□□ -0.91
SPG11-209ENST00000558253 SLU7O95391 586 aaKnown RBP9.39□□□□□ -0.91
SPG11-209ENST00000558253 NPR1P16066 1061 aa9.39□□□□□ -0.91
SPG11-209ENST00000558253 UBA7P41226 1012 aa9.39□□□□□ -0.91
SPG11-209ENST00000558253 GRIN1Q05586 938 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms