RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 TSHZ3Q63HK5 1081 aa9.08□□□□□ -0.96
SPG11-205ENST00000558080 ACER1Q8TDN7 264 aa9.08□□□□□ -0.96
SPG11-205ENST00000558080 DYNLL2Q96FJ2 89 aa9.08□□□□□ -0.96
SPG11-205ENST00000558080 ECHDC1Q9NTX5 307 aa9.08□□□□□ -0.96
SPG11-205ENST00000558080 PLXNA1Q9UIW2 1896 aa9.08□□□□□ -0.96
SPG11-205ENST00000558080 CYP2D7A0A087X1C5 515 aa9.07□□□□□ -0.96
SPG11-205ENST00000558080 SMIM22K7EJ46 135 aa9.07□□□□□ -0.96
SPG11-205ENST00000558080 GUCY1A2P33402 732 aa9.07□□□□□ -0.96
SPG11-205ENST00000558080 HERVK_113P62684 666 aa9.07□□□□□ -0.96
SPG11-205ENST00000558080 UBXN2AP68543 259 aa9.07□□□□□ -0.96
SPG11-205ENST00000558080 GABPAQ06546 454 aa9.07□□□□□ -0.96
SPG11-205ENST00000558080 SEPT2Q15019 361 aa9.07□□□□□ -0.96
SPG11-205ENST00000558080 PRPF38BQ5VTL8 546 aaKnown RBP9.07□□□□□ -0.96
SPG11-205ENST00000558080 ZSCAN25Q6NSZ9 544 aa9.07□□□□□ -0.96
SPG11-205ENST00000558080 ZSCAN1Q8NBB4 408 aa9.07□□□□□ -0.96
SPG11-205ENST00000558080 SLC44A5Q8NCS7 719 aa9.07□□□□□ -0.96
SPG11-205ENST00000558080 GPATCH3Q96I76 525 aa9.07□□□□□ -0.96
SPG11-205ENST00000558080 CRBNQ96SW2 442 aa9.07□□□□□ -0.96
SPG11-205ENST00000558080 PAGR1Q9BTK6 254 aa9.07□□□□□ -0.96
SPG11-205ENST00000558080 RNF208Q9H0X6 261 aa9.07□□□□□ -0.96
SPG11-205ENST00000558080 TXNRD2Q9NNW7 524 aa9.07□□□□□ -0.96
SPG11-205ENST00000558080 ATP8A2Q9NTI2 1148 aa9.07□□□□□ -0.96
SPG11-205ENST00000558080 RBPJLQ9UBG7 517 aa9.07□□□□□ -0.96
SPG11-205ENST00000558080 MORF4L1Q9UBU8 362 aa9.07□□□□□ -0.96
SPG11-205ENST00000558080 SLC4A4Q9Y6R1 1079 aa9.07□□□□□ -0.96
SPG11-205ENST00000558080 FRMPD3Q5JV73 1810 aa9.07□□□□□ -0.96
SPG11-205ENST00000558080 GREB1LQ9C091 1923 aaPredicted RBP9.07□□□□□ -0.96
SPG11-205ENST00000558080 USP17L15C9J2P7 530 aa9.06□□□□□ -0.96
SPG11-205ENST00000558080 USP17L13C9JLJ4 530 aa9.06□□□□□ -0.96
SPG11-205ENST00000558080 USP17L12C9JPN9 530 aa9.06□□□□□ -0.96
SPG11-205ENST00000558080 USP17L11C9JVI0 530 aa9.06□□□□□ -0.96
SPG11-205ENST00000558080 USP17L21D6R901 530 aa9.06□□□□□ -0.96
SPG11-205ENST00000558080 USP17L18D6R9N7 530 aa9.06□□□□□ -0.96
SPG11-205ENST00000558080 USP17L22D6RA61 530 aa9.06□□□□□ -0.96
SPG11-205ENST00000558080 USP17L17D6RBQ6 530 aa9.06□□□□□ -0.96
SPG11-205ENST00000558080 USP17L19D6RCP7 530 aa9.06□□□□□ -0.96
SPG11-205ENST00000558080 USP17L20D6RJB6 530 aa9.06□□□□□ -0.96
SPG11-205ENST00000558080 ZMYND10O75800 440 aa9.06□□□□□ -0.96
SPG11-205ENST00000558080 ADH1CP00326 375 aa9.06□□□□□ -0.96
SPG11-205ENST00000558080 INHAP05111 366 aa9.06□□□□□ -0.96
SPG11-205ENST00000558080 TIMP2P16035 220 aa9.06□□□□□ -0.96
SPG11-205ENST00000558080 USP17L24Q0WX57 530 aa9.06□□□□□ -0.96
SPG11-205ENST00000558080 IRF5Q13568 498 aa9.06□□□□□ -0.96
SPG11-205ENST00000558080 UBE3CQ15386 1083 aa9.06□□□□□ -0.96
SPG11-205ENST00000558080 MRPL14Q6P1L8 145 aaKnown RBP9.06□□□□□ -0.96
SPG11-205ENST00000558080 LYPD8Q6UX82 237 aa9.06□□□□□ -0.96
SPG11-205ENST00000558080 GPRC5AQ8NFJ5 357 aa9.06□□□□□ -0.96
SPG11-205ENST00000558080 KLF16Q9BXK1 252 aaPredicted RBP9.06□□□□□ -0.96
SPG11-205ENST00000558080 KIAA1683Q9H0B3 1180 aa9.06□□□□□ -0.96
SPG11-205ENST00000558080 PUS7LQ9H0K6 701 aaKnown RBP9.06□□□□□ -0.96
SPG11-205ENST00000558080 MCM3APO60318 1980 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 GJB1P08034 283 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 AKR1B1P15121 316 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 VCAM1P19320 739 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 CYP2B6P20813 491 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 CDK8P49336 464 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 USP14P54578 494 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 ERVK-9P63128 1117 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 ERVK-24P63145 666 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 C12orf60Q5U649 245 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 CATSPERGQ6ZRH7 1159 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 CLEC10AQ8IUN9 316 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 CCAR1Q8IX12 1150 aaKnown RBP9.05□□□□□ -0.96
SPG11-205ENST00000558080 AMOTL1Q8IY63 956 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 STK11IPQ8N1F8 1099 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 KBTBD3Q8NAB2 608 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 OTUD7AQ8TE49 926 aaPredicted RBP9.05□□□□□ -0.96
SPG11-205ENST00000558080 SHISA4Q96DD7 197 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 DDRGK1Q96HY6 314 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 C12orf42Q96LP6 360 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 SWAP70Q9UH65 585 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 GJD2Q9UKL4 321 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 MKI67P46013 3256 aaKnown RBP9.05□□□□□ -0.96
SPG11-205ENST00000558080 BRCA2P51587 3418 aa9.05□□□□□ -0.96
SPG11-205ENST00000558080 A0A1W2PRG0 241 aa9.04□□□□□ -0.96
SPG11-205ENST00000558080 RNF113AO15541 343 aaKnown RBP9.04□□□□□ -0.96
SPG11-205ENST00000558080 CNMDO75829 334 aa9.04□□□□□ -0.96
SPG11-205ENST00000558080 TFRCP02786 760 aaKnown RBP9.04□□□□□ -0.96
SPG11-205ENST00000558080 GJA8P48165 433 aa9.04□□□□□ -0.96
SPG11-205ENST00000558080 CTR9Q6PD62 1173 aa9.04□□□□□ -0.96
SPG11-205ENST00000558080 TMEM179Q6ZVK1 233 aa9.04□□□□□ -0.96
SPG11-205ENST00000558080 FAM174AQ8TBP5 190 aa9.04□□□□□ -0.96
SPG11-205ENST00000558080 U2AF1L4Q8WU68 220 aaKnown RBP9.04□□□□□ -0.96
SPG11-205ENST00000558080 OSBP2Q969R2 916 aa9.04□□□□□ -0.96
SPG11-205ENST00000558080 CDK15Q96Q40 435 aa9.04□□□□□ -0.96
SPG11-205ENST00000558080 STRBPQ96SI9 672 aaKnown RBP9.04□□□□□ -0.96
SPG11-205ENST00000558080 PORCNQ9H237 461 aa9.04□□□□□ -0.96
SPG11-205ENST00000558080 RPAP3Q9H6T3 665 aaPredicted RBP9.04□□□□□ -0.96
SPG11-205ENST00000558080 CWC22Q9HCG8 908 aaKnown RBP9.04□□□□□ -0.96
SPG11-205ENST00000558080 A0A0G2JMZ2 1700 aa9.04□□□□□ -0.96
SPG11-205ENST00000558080 GSG1L2A8MUP6 293 aa9.03□□□□□ -0.96
SPG11-205ENST00000558080 MINDY4BA8MYZ0 360 aa9.03□□□□□ -0.96
SPG11-205ENST00000558080 ERC2O15083 957 aa9.03□□□□□ -0.96
SPG11-205ENST00000558080 SGPL1O95470 568 aa9.03□□□□□ -0.96
SPG11-205ENST00000558080 HMGCRP04035 888 aa9.03□□□□□ -0.96
SPG11-205ENST00000558080 MAPK4P31152 587 aa9.03□□□□□ -0.96
SPG11-205ENST00000558080 WDR4P57081 412 aaKnown RBP9.03□□□□□ -0.96
SPG11-205ENST00000558080 ATP2B2Q01814 1243 aa9.03□□□□□ -0.96
SPG11-205ENST00000558080 KIAA1755Q5JYT7 1200 aa9.03□□□□□ -0.96
SPG11-205ENST00000558080 ANKRD45Q5TZF3 282 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms