RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 ACLYP53396 1101 aa16.09■□□□□ 0.17
SNRPA1-204ENST00000558020 MFAP1P55081 439 aaKnown RBP16.09■□□□□ 0.17
SNRPA1-204ENST00000558020 TOMM22Q9NS69 142 aa16.09■□□□□ 0.17
SNRPA1-204ENST00000558020 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.09■□□□□ 0.17
SNRPA1-204ENST00000558020 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.09■□□□□ 0.17
SNRPA1-204ENST00000558020 ASB14A6NK59 587 aa16.08■□□□□ 0.16
SNRPA1-204ENST00000558020 TRIM6-TRIM34B2RNG4 842 aa16.08■□□□□ 0.16
SNRPA1-204ENST00000558020 ADAMTS4O75173 837 aa16.08■□□□□ 0.16
SNRPA1-204ENST00000558020 CLTBP09497 229 aa16.08■□□□□ 0.16
SNRPA1-204ENST00000558020 CCDC144BQ3MJ40 725 aa16.08■□□□□ 0.16
SNRPA1-204ENST00000558020 FAM109BQ6ICB4 259 aaPredicted RBP16.08■□□□□ 0.16
SNRPA1-204ENST00000558020 BADQ92934 168 aa16.08■□□□□ 0.16
SNRPA1-204ENST00000558020 VTI1AQ96AJ9 217 aa16.08■□□□□ 0.16
SNRPA1-204ENST00000558020 GLT1D1Q96MS3 346 aa16.08■□□□□ 0.16
SNRPA1-204ENST00000558020 TOX2Q96NM4 488 aa16.08■□□□□ 0.16
SNRPA1-204ENST00000558020 TRERF1Q96PN7 1200 aa16.08■□□□□ 0.16
SNRPA1-204ENST00000558020 STARD7Q9NQZ5 370 aa16.08■□□□□ 0.16
SNRPA1-204ENST00000558020 PDLIM7Q9NR12 457 aa16.08■□□□□ 0.16
SNRPA1-204ENST00000558020 IL17RBQ9NRM6 502 aa16.08■□□□□ 0.16
SNRPA1-204ENST00000558020 MTMR10Q9NXD2 777 aa16.08■□□□□ 0.16
SNRPA1-204ENST00000558020 STXBP5LQ9Y2K9 1186 aa16.08■□□□□ 0.16
SNRPA1-204ENST00000558020 PQBP1O60828 265 aaKnown RBP16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 FGAP02671 866 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 FGRP09769 529 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 C6orf222P0C671 652 aaPredicted RBP16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 PCP11498 1178 aaKnown RBP16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 ALAS1P13196 640 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 RAG1P15918 1043 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 KCNA10Q16322 511 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 GNASQ5JWF2 1037 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 VPS53Q5VIR6 699 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 KCTD1Q719H9 257 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 Q7L0L9 218 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 ARMCX2Q7L311 632 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 CCDC144CPQ8IYA2 1237 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 KLHDC9Q8NEP7 349 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 DCAF4Q8WV16 495 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 AGBL1Q96MI9 1066 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 INCENPQ9NQS7 918 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 RNF146Q9NTX7 359 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 TMEM39AQ9NV64 488 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 PNMA2Q9UL42 364 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 ELP1O95163 1332 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 MROH7Q68CQ1 1323 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 SYNRGQ9UMZ2 1314 aa16.07■□□□□ 0.16
SNRPA1-204ENST00000558020 TRIM43BA6NCK2 446 aa16.06■□□□□ 0.16
SNRPA1-204ENST00000558020 KIAA0355O15063 1070 aa16.06■□□□□ 0.16
SNRPA1-204ENST00000558020 FOXP2O15409 715 aa16.06■□□□□ 0.16
SNRPA1-204ENST00000558020 TOP1P11387 765 aaKnown RBP16.06■□□□□ 0.16
SNRPA1-204ENST00000558020 SHHQ15465 462 aa16.06■□□□□ 0.16
SNRPA1-204ENST00000558020 CCDC96Q2M329 555 aa16.06■□□□□ 0.16
SNRPA1-204ENST00000558020 RRP12Q5JTH9 1297 aaKnown RBP16.06■□□□□ 0.16
SNRPA1-204ENST00000558020 NOL8Q76FK4 1167 aaKnown RBP16.06■□□□□ 0.16
SNRPA1-204ENST00000558020 ANKRD33Q7Z3H0 272 aa16.06■□□□□ 0.16
SNRPA1-204ENST00000558020 RILPL2Q969X0 211 aa16.06■□□□□ 0.16
SNRPA1-204ENST00000558020 TRIM43Q96BQ3 446 aaPredicted RBP16.06■□□□□ 0.16
SNRPA1-204ENST00000558020 CHMP4CQ96CF2 233 aa16.06■□□□□ 0.16
SNRPA1-204ENST00000558020 LNPKQ9C0E8 428 aa16.06■□□□□ 0.16
SNRPA1-204ENST00000558020 PRR12Q9ULL5 1215 aa16.06■□□□□ 0.16
SNRPA1-204ENST00000558020 NMT2O60551 498 aa16.05■□□□□ 0.16
SNRPA1-204ENST00000558020 HSPD1P10809 573 aaKnown RBP16.05■□□□□ 0.16
SNRPA1-204ENST00000558020 CST5P28325 142 aaPredicted RBP16.05■□□□□ 0.16
SNRPA1-204ENST00000558020 GJA9P57773 515 aa16.05■□□□□ 0.16
SNRPA1-204ENST00000558020 CNTN2Q02246 1040 aa16.05■□□□□ 0.16
SNRPA1-204ENST00000558020 TNFAIP2Q03169 654 aa16.05■□□□□ 0.16
SNRPA1-204ENST00000558020 CCDC174Q6PII3 467 aa16.05■□□□□ 0.16
SNRPA1-204ENST00000558020 MFSD6Q6ZSS7 791 aa16.05■□□□□ 0.16
SNRPA1-204ENST00000558020 SH3RF1Q7Z6J0 888 aa16.05■□□□□ 0.16
SNRPA1-204ENST00000558020 FAM133AQ8N9E0 248 aa16.05■□□□□ 0.16
SNRPA1-204ENST00000558020 LENG1Q96BZ8 264 aaPredicted RBP16.05■□□□□ 0.16
SNRPA1-204ENST00000558020 FAM227BQ96M60 508 aa16.05■□□□□ 0.16
SNRPA1-204ENST00000558020 TTC14Q96N46 770 aa16.05■□□□□ 0.16
SNRPA1-204ENST00000558020 RNF41Q9H4P4 317 aaPredicted RBP16.05■□□□□ 0.16
SNRPA1-204ENST00000558020 A1CFQ9NQ94 594 aaKnown RBP16.05■□□□□ 0.16
SNRPA1-204ENST00000558020 TCP11L1Q9NUJ3 509 aa16.05■□□□□ 0.16
SNRPA1-204ENST00000558020 CCPG1Q9ULG6 757 aa16.05■□□□□ 0.16
SNRPA1-204ENST00000558020 MTMR7Q9Y216 660 aa16.05■□□□□ 0.16
SNRPA1-204ENST00000558020 ZNF536O15090 1300 aa16.04■□□□□ 0.16
SNRPA1-204ENST00000558020 ZMYM6O95789 1325 aa16.04■□□□□ 0.16
SNRPA1-204ENST00000558020 ICAM1P05362 532 aa16.04■□□□□ 0.16
SNRPA1-204ENST00000558020 ASGR1P07306 291 aa16.04■□□□□ 0.16
SNRPA1-204ENST00000558020 NOVP48745 357 aa16.04■□□□□ 0.16
SNRPA1-204ENST00000558020 NT5C2P49902 561 aa16.04■□□□□ 0.16
SNRPA1-204ENST00000558020 ZNF697Q5TEC3 545 aa16.04■□□□□ 0.16
SNRPA1-204ENST00000558020 AP5M1Q9H0R1 490 aa16.04■□□□□ 0.16
SNRPA1-204ENST00000558020 UPF3AQ9H1J1 476 aaKnown RBP16.04■□□□□ 0.16
SNRPA1-204ENST00000558020 COL6A3P12111 3177 aa16.03■□□□□ 0.16
SNRPA1-204ENST00000558020 LAMA2P24043 3122 aaKnown RBP16.03■□□□□ 0.16
SNRPA1-204ENST00000558020 CCDC171Q6TFL3 1326 aa16.03■□□□□ 0.16
SNRPA1-204ENST00000558020 A0A0D9SFI3 127 aa16.03■□□□□ 0.16
SNRPA1-204ENST00000558020 FPGSQ05932 587 aa16.03■□□□□ 0.16
SNRPA1-204ENST00000558020 NMIQ13287 307 aaPredicted RBP16.03■□□□□ 0.16
SNRPA1-204ENST00000558020 IQSEC1Q6DN90 963 aa16.03■□□□□ 0.16
SNRPA1-204ENST00000558020 CCSAPQ6IQ19 270 aaPredicted RBP16.03■□□□□ 0.16
SNRPA1-204ENST00000558020 B4GALNT3Q6L9W6 998 aa16.03■□□□□ 0.16
SNRPA1-204ENST00000558020 SMC5Q8IY18 1101 aa16.03■□□□□ 0.16
SNRPA1-204ENST00000558020 FGD4Q96M96 766 aa16.03■□□□□ 0.16
SNRPA1-204ENST00000558020 CYP39A1Q9NYL5 469 aa16.03■□□□□ 0.16
SNRPA1-204ENST00000558020 ADD3Q9UEY8 706 aaKnown RBP16.03■□□□□ 0.16
SNRPA1-204ENST00000558020 A0A0U1RQG5 324 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms