RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 GJD2Q9UKL4 321 aa16.71■□□□□ 0.27
USP3-205ENST00000557884 ATP2A1O14983 1001 aa16.7■□□□□ 0.26
USP3-205ENST00000557884 ALAS1P13196 640 aa16.7■□□□□ 0.26
USP3-205ENST00000557884 CYP2B6P20813 491 aa16.7■□□□□ 0.26
USP3-205ENST00000557884 PTPREP23469 700 aa16.7■□□□□ 0.26
USP3-205ENST00000557884 OAZ1P54368 228 aa16.7■□□□□ 0.26
USP3-205ENST00000557884 PRMT2P55345 433 aa16.7■□□□□ 0.26
USP3-205ENST00000557884 ANAPC15P60006 121 aa16.7■□□□□ 0.26
USP3-205ENST00000557884 SLC35G1Q2M3R5 365 aa16.7■□□□□ 0.26
USP3-205ENST00000557884 MORN1Q5T089 497 aa16.7■□□□□ 0.26
USP3-205ENST00000557884 APOA5Q6Q788 366 aa16.7■□□□□ 0.26
USP3-205ENST00000557884 SYNE3Q6ZMZ3 975 aa16.7■□□□□ 0.26
USP3-205ENST00000557884 CTCFLQ8NI51 663 aaPredicted RBP16.7■□□□□ 0.26
USP3-205ENST00000557884 NUDT12Q9BQG2 462 aa16.7■□□□□ 0.26
USP3-205ENST00000557884 CCPG1Q9ULG6 757 aa16.7■□□□□ 0.26
USP3-205ENST00000557884 ZBTB43O43298 467 aa16.69■□□□□ 0.26
USP3-205ENST00000557884 PLEKHA8P1O95397 391 aa16.69■□□□□ 0.26
USP3-205ENST00000557884 ICAM1P05362 532 aa16.69■□□□□ 0.26
USP3-205ENST00000557884 KIF5BP33176 963 aa16.69■□□□□ 0.26
USP3-205ENST00000557884 COPB2P35606 906 aa16.69■□□□□ 0.26
USP3-205ENST00000557884 CDC37Q16543 378 aaPredicted RBP16.69■□□□□ 0.26
USP3-205ENST00000557884 NBPF11Q86T75 865 aa16.69■□□□□ 0.26
USP3-205ENST00000557884 SOCS4Q8WXH5 440 aa16.69■□□□□ 0.26
USP3-205ENST00000557884 PIBF1Q8WXW3 757 aa16.69■□□□□ 0.26
USP3-205ENST00000557884 MMP19Q99542 508 aa16.69■□□□□ 0.26
USP3-205ENST00000557884 JMJD4Q9H9V9 463 aa16.69■□□□□ 0.26
USP3-205ENST00000557884 RNF146Q9NTX7 359 aa16.69■□□□□ 0.26
USP3-205ENST00000557884 HPS5Q9UPZ3 1129 aa16.69■□□□□ 0.26
USP3-205ENST00000557884 SLC15A5A6NIM6 579 aa16.68■□□□□ 0.26
USP3-205ENST00000557884 GOLGA8BA8MQT2 603 aa16.68■□□□□ 0.26
USP3-205ENST00000557884 CALM1P0DP23 149 aa16.68■□□□□ 0.26
USP3-205ENST00000557884 CALM2P0DP24 149 aa16.68■□□□□ 0.26
USP3-205ENST00000557884 CALM3P0DP25 149 aa16.68■□□□□ 0.26
USP3-205ENST00000557884 ELNP15502 786 aa16.68■□□□□ 0.26
USP3-205ENST00000557884 ADORA2AP29274 412 aa16.68■□□□□ 0.26
USP3-205ENST00000557884 GRB14Q14449 540 aa16.68■□□□□ 0.26
USP3-205ENST00000557884 HOMER1Q86YM7 354 aa16.68■□□□□ 0.26
USP3-205ENST00000557884 CMTR1Q8N1G2 835 aaKnown RBP16.68■□□□□ 0.26
USP3-205ENST00000557884 SH3TC2Q8TF17 1288 aa16.68■□□□□ 0.26
USP3-205ENST00000557884 MAP3K14Q99558 947 aa16.68■□□□□ 0.26
USP3-205ENST00000557884 LARP6Q9BRS8 491 aaKnown RBP16.68■□□□□ 0.26
USP3-205ENST00000557884 PDRG1Q9NUG6 133 aa16.68■□□□□ 0.26
USP3-205ENST00000557884 PARP14Q460N5 1801 aa16.68■□□□□ 0.26
USP3-205ENST00000557884 CENPFP49454 3210 aa16.68■□□□□ 0.26
USP3-205ENST00000557884 GOLGA8AA7E2F4 631 aa16.67■□□□□ 0.26
USP3-205ENST00000557884 ADCY3O60266 1144 aa16.67■□□□□ 0.26
USP3-205ENST00000557884 PGK2P07205 417 aa16.67■□□□□ 0.26
USP3-205ENST00000557884 FCER1AP12319 257 aa16.67■□□□□ 0.26
USP3-205ENST00000557884 RGS2P41220 211 aa16.67■□□□□ 0.26
USP3-205ENST00000557884 MAP2K5Q13163 448 aa16.67■□□□□ 0.26
USP3-205ENST00000557884 QRICH1Q2TAL8 776 aa16.67■□□□□ 0.26
USP3-205ENST00000557884 USH1GQ495M9 461 aa16.67■□□□□ 0.26
USP3-205ENST00000557884 SLC9C1Q4G0N8 1177 aa16.67■□□□□ 0.26
USP3-205ENST00000557884 FANCBQ8NB91 859 aa16.67■□□□□ 0.26
USP3-205ENST00000557884 USP6NLQ92738 828 aa16.67■□□□□ 0.26
USP3-205ENST00000557884 TRERF1Q96PN7 1200 aa16.67■□□□□ 0.26
USP3-205ENST00000557884 C22orf23Q9BZE7 217 aa16.67■□□□□ 0.26
USP3-205ENST00000557884 CYTH3O43739 400 aa16.66■□□□□ 0.26
USP3-205ENST00000557884 STRNO43815 780 aa16.66■□□□□ 0.26
USP3-205ENST00000557884 MYCP01106 439 aaPredicted RBP16.66■□□□□ 0.26
USP3-205ENST00000557884 GRK4P32298 578 aa16.66■□□□□ 0.26
USP3-205ENST00000557884 GNAQP50148 359 aa16.66■□□□□ 0.26
USP3-205ENST00000557884 IRF5Q13568 498 aa16.66■□□□□ 0.26
USP3-205ENST00000557884 TOB2Q14106 344 aaPredicted RBP16.66■□□□□ 0.26
USP3-205ENST00000557884 KCTD2Q14681 263 aa16.66■□□□□ 0.26
USP3-205ENST00000557884 RTN1Q16799 776 aa16.66■□□□□ 0.26
USP3-205ENST00000557884 MUM1L1Q5H9M0 696 aa16.66■□□□□ 0.26
USP3-205ENST00000557884 DPP9Q86TI2 863 aa16.66■□□□□ 0.26
USP3-205ENST00000557884 CCDC82Q8N4S0 544 aa16.66■□□□□ 0.26
USP3-205ENST00000557884 SRBD1Q8N5C6 995 aaKnown RBP16.66■□□□□ 0.26
USP3-205ENST00000557884 CHST13Q8NET6 341 aa16.66■□□□□ 0.26
USP3-205ENST00000557884 ABHD8Q96I13 439 aa16.66■□□□□ 0.26
USP3-205ENST00000557884 PIGSQ96S52 555 aa16.66■□□□□ 0.26
USP3-205ENST00000557884 AGXT2Q9BYV1 514 aa16.66■□□□□ 0.26
USP3-205ENST00000557884 ACAD9Q9H845 621 aa16.66■□□□□ 0.26
USP3-205ENST00000557884 BIN2Q9UBW5 565 aaPredicted RBP16.66■□□□□ 0.26
USP3-205ENST00000557884 FBXO40Q9UH90 709 aa16.66■□□□□ 0.26
USP3-205ENST00000557884 COBLO75128 1261 aa16.65■□□□□ 0.26
USP3-205ENST00000557884 METAP2P50579 478 aaKnown RBP eCLIP16.65■□□□□ 0.26
USP3-205ENST00000557884 CCL14Q16627 93 aa16.65■□□□□ 0.26
USP3-205ENST00000557884 TKFCQ3LXA3 575 aa16.65■□□□□ 0.26
USP3-205ENST00000557884 TMTC3Q6ZXV5 915 aa16.65■□□□□ 0.26
USP3-205ENST00000557884 ABRAQ8N0Z2 381 aa16.65■□□□□ 0.26
USP3-205ENST00000557884 ANKRD35Q8N283 1001 aa16.65■□□□□ 0.26
USP3-205ENST00000557884 FBXL16Q8N461 479 aa16.65■□□□□ 0.26
USP3-205ENST00000557884 SLAIN1Q8ND83 568 aa16.65■□□□□ 0.26
USP3-205ENST00000557884 NPLOC4Q8TAT6 608 aa16.65■□□□□ 0.26
USP3-205ENST00000557884 MTMR8Q96EF0 704 aa16.65■□□□□ 0.26
USP3-205ENST00000557884 IL17RAQ96F46 866 aa16.65■□□□□ 0.26
USP3-205ENST00000557884 APBA2Q99767 749 aa16.65■□□□□ 0.26
USP3-205ENST00000557884 LZTS2Q9BRK4 669 aa16.65■□□□□ 0.26
USP3-205ENST00000557884 RIOX1Q9H6W3 641 aa16.65■□□□□ 0.26
USP3-205ENST00000557884 UPF2Q9HAU5 1272 aaKnown RBP16.65■□□□□ 0.26
USP3-205ENST00000557884 NFIBO00712 420 aa16.64■□□□□ 0.25
USP3-205ENST00000557884 ZBTB5O15062 677 aa16.64■□□□□ 0.25
USP3-205ENST00000557884 PPP1R11O60927 126 aaPredicted RBP16.64■□□□□ 0.25
USP3-205ENST00000557884 CDC27P30260 824 aa16.64■□□□□ 0.25
USP3-205ENST00000557884 NSMFQ6X4W1 530 aa16.64■□□□□ 0.25
USP3-205ENST00000557884 NOL8Q76FK4 1167 aaKnown RBP16.64■□□□□ 0.25
USP3-205ENST00000557884 FBXO11Q86XK2 927 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms