RNA–Protein interactions for RNA: ENST00000557771.5

RPGRIP1-213, Transcript of RPGR interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGRIP1, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-213ENST00000557771 PARP1P09874 1014 aaKnown RBP12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 TCP1P17987 556 aaKnown RBP12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 RASSF7Q02833 373 aa12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 USP4Q13107 963 aa12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 PAPOLBQ9NRJ5 636 aaKnown RBP12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 HELLSQ9NRZ9 838 aa12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 ELF3P78545 371 aaPredicted RBP12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 DRP2Q13474 957 aa12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 EPHA10Q5JZY3 1008 aa12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 WASF1Q92558 559 aa12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 SNX12Q9UMY4 172 aa12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 EDC4Q6P2E9 1401 aaKnown RBP12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 MRC2Q9UBG0 1479 aa12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 CAMSAP1Q5T5Y3 1602 aa12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 MAP2P11137 1827 aaKnown RBP12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 GLI2P10070 1586 aa12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 EIF4A1P60842 406 aaKnown RBP12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 PTPAQ15257 358 aa12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 RILPL1Q5EBL4 403 aa12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 DDX42Q86XP3 938 aaKnown RBP eCLIP12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 B4GALNT2Q8NHY0 566 aa12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 FBF1Q8TES7 1133 aa12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 DENND2AQ9ULE3 1009 aa12.67□□□□□ -0.38
RPGRIP1-213ENST00000557771 ARHGEF10O15013 1369 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 COL15A1P39059 1388 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 hCG_2014768A0A024R1R8 64 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 HIP1RO75146 1068 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 PECAM1P16284 738 aaPredicted RBP12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 XBP1P17861 261 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 EHHADHQ08426 723 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 LONP2Q86WA8 852 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 NUP58Q9BVL2 599 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 REXO2Q9Y3B8 237 aaKnown RBP12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 CAPN6Q9Y6Q1 641 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 POGZQ7Z3K3 1410 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 TRIM37O94972 964 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 GLI1P08151 1106 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 CCDC6Q16204 474 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 TCP11X2Q5H9J9 407 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 GIGYF2Q6Y7W6 1299 aaKnown RBP12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 TMC4Q7Z404 712 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 FAM228AQ86W67 206 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 FNBP4Q8N3X1 1017 aaPredicted RBP12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 AGAP11Q8TF27 550 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 PAGE5Q96GU1 130 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 MED15Q96RN5 788 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 HAUS7Q99871 368 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 RCCD1A6NED2 376 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 CEP104O60308 925 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 RAPGEF3O95398 923 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 KLK7P49862 253 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 PAPOLAP51003 745 aaKnown RBP12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 RPS6KA3P51812 740 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 MAP3K12Q12852 859 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 GRIK3Q13003 919 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 PAPD7Q5XG87 772 aaKnown RBP12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 XAGE3Q8WTP9 111 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 ASXL2Q76L83 1435 aa12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 SETD1BQ9UPS6 1966 aaKnown RBP12.66□□□□□ -0.38
RPGRIP1-213ENST00000557771 TNNC1P63316 161 aa12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 SOGA3Q5TF21 947 aa12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 COPS6Q7L5N1 327 aa12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 OSBP2Q969R2 916 aa12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 NOC4LQ9BVI4 516 aaKnown RBP12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 TSGA10Q9BZW7 698 aa12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 PICK1Q9NRD5 415 aa12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 SLC39A6Q13433 755 aa12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 TRADDQ15628 312 aa12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 HAUS3Q68CZ6 603 aa12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 CSGALNACT2Q8N6G5 542 aa12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 RAPGEF5Q92565 580 aa12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 ZNF594Q96JF6 807 aaPredicted RBP12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 SWAP70Q9UH65 585 aa12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 PLEKP08567 350 aaPredicted RBP12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 RRAGAQ7L523 313 aa12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 TEKT4Q8WW24 435 aa12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 CEP126Q9P2H0 1117 aa12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 USH1CQ9Y6N9 552 aa12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 SLC4A4Q9Y6R1 1079 aa12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 KIAA1210Q9ULL0 1709 aa12.65□□□□□ -0.38
RPGRIP1-213ENST00000557771 ZC3H4Q9UPT8 1303 aaKnown RBP12.65□□□□□ -0.39
RPGRIP1-213ENST00000557771 PTPREP23469 700 aa12.64□□□□□ -0.39
RPGRIP1-213ENST00000557771 MCM7P33993 719 aa12.64□□□□□ -0.39
RPGRIP1-213ENST00000557771 STAT6P42226 847 aa12.64□□□□□ -0.39
RPGRIP1-213ENST00000557771 PPP2R2AP63151 447 aa12.64□□□□□ -0.39
RPGRIP1-213ENST00000557771 YTHDF3Q7Z739 585 aaKnown RBP12.64□□□□□ -0.39
RPGRIP1-213ENST00000557771 LRRC45Q96CN5 670 aa12.64□□□□□ -0.39
RPGRIP1-213ENST00000557771 NOX5Q96PH1 765 aa12.64□□□□□ -0.39
RPGRIP1-213ENST00000557771 TMEM165Q9HC07 324 aa12.64□□□□□ -0.39
RPGRIP1-213ENST00000557771 NLRC4Q9NPP4 1024 aa12.64□□□□□ -0.39
RPGRIP1-213ENST00000557771 PSMA7O14818 248 aa12.64□□□□□ -0.39
RPGRIP1-213ENST00000557771 PDCD2Q16342 344 aaPredicted RBP12.64□□□□□ -0.39
RPGRIP1-213ENST00000557771 RTN1Q16799 776 aa12.64□□□□□ -0.39
RPGRIP1-213ENST00000557771 SPICE1Q8N0Z3 855 aa12.64□□□□□ -0.39
RPGRIP1-213ENST00000557771 SENP2Q9HC62 589 aa12.64□□□□□ -0.39
RPGRIP1-213ENST00000557771 PANK4Q9NVE7 773 aa12.64□□□□□ -0.39
RPGRIP1-213ENST00000557771 SALL1Q9NSC2 1324 aa12.64□□□□□ -0.39
RPGRIP1-213ENST00000557771 SLCO1A2P46721 670 aa12.64□□□□□ -0.39
RPGRIP1-213ENST00000557771 FAM47EQ6ZV65 393 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms